RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 TSPYL2Q9H2G4 693 aaPredicted RBP5.9□□□□□ -1.46
PTP4A1-204ENST00000578299 RGL2O15211 777 aa5.89□□□□□ -1.47
PTP4A1-204ENST00000578299 DCAF8L2P0C7V8 631 aa5.89□□□□□ -1.47
PTP4A1-204ENST00000578299 CD44P16070 742 aaKnown RBP5.87□□□□□ -1.47
PTP4A1-204ENST00000578299 CCDC61Q9Y6R9 512 aa5.87□□□□□ -1.47
PTP4A1-204ENST00000578299 PYGBP11216 843 aa5.86□□□□□ -1.47
PTP4A1-204ENST00000578299 C19orf67A6NJJ6 358 aa5.85□□□□□ -1.47
PTP4A1-204ENST00000578299 RIOK3O14730 519 aaKnown RBP5.85□□□□□ -1.47
PTP4A1-204ENST00000578299 TAOK2Q9UL54 1235 aa5.85□□□□□ -1.47
PTP4A1-204ENST00000578299 RNF25Q96BH1 459 aaPredicted RBP5.84□□□□□ -1.47
PTP4A1-204ENST00000578299 ZRANB1Q9UGI0 708 aa5.84□□□□□ -1.47
PTP4A1-204ENST00000578299 HAX1O00165 279 aa5.81□□□□□ -1.48
PTP4A1-204ENST00000578299 VGFO15240 615 aaPredicted RBP5.81□□□□□ -1.48
PTP4A1-204ENST00000578299 ZNF467Q7Z7K2 595 aaPredicted RBP5.81□□□□□ -1.48
PTP4A1-204ENST00000578299 ZNF579Q8NAF0 562 aaKnown RBP5.81□□□□□ -1.48
PTP4A1-204ENST00000578299 SGIP1Q9BQI5 828 aa5.81□□□□□ -1.48
PTP4A1-204ENST00000578299 KIF12Q96FN5 646 aa5.8□□□□□ -1.48
PTP4A1-204ENST00000578299 CHGAP10645 457 aaKnown RBP5.79□□□□□ -1.48
PTP4A1-204ENST00000578299 POTEHQ6S545 545 aa5.79□□□□□ -1.48
PTP4A1-204ENST00000578299 PHF12Q96QT6 1004 aa5.79□□□□□ -1.48
PTP4A1-204ENST00000578299 PCDHB13Q9Y5F0 798 aa5.79□□□□□ -1.48
PTP4A1-204ENST00000578299 MAP3K13O43283 966 aa5.78□□□□□ -1.48
PTP4A1-204ENST00000578299 HS6ST3Q8IZP7 471 aa5.78□□□□□ -1.48
PTP4A1-204ENST00000578299 BBXQ8WY36 941 aaPredicted RBP5.78□□□□□ -1.48
PTP4A1-204ENST00000578299 PCDHB8Q9UN66 801 aa5.77□□□□□ -1.49
PTP4A1-204ENST00000578299 PDAP1Q13442 181 aaKnown RBP5.76□□□□□ -1.49
PTP4A1-204ENST00000578299 IFNL1Q8IU54 200 aa5.76□□□□□ -1.49
PTP4A1-204ENST00000578299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.75□□□□□ -1.49
PTP4A1-204ENST00000578299 STK25O00506 426 aa5.75□□□□□ -1.49
PTP4A1-204ENST00000578299 CLCN6P51797 869 aa5.75□□□□□ -1.49
PTP4A1-204ENST00000578299 ZFP91Q96JP5 570 aaPredicted RBP5.75□□□□□ -1.49
PTP4A1-204ENST00000578299 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.75□□□□□ -1.49
PTP4A1-204ENST00000578299 PSEN1P49768 467 aa5.74□□□□□ -1.49
PTP4A1-204ENST00000578299 EVX2Q03828 476 aa5.74□□□□□ -1.49
PTP4A1-204ENST00000578299 DNAJC5Q9H3Z4 198 aa5.74□□□□□ -1.49
PTP4A1-204ENST00000578299 MS4A3Q96HJ5 214 aa5.73□□□□□ -1.49
PTP4A1-204ENST00000578299 BCL11BQ9C0K0 894 aaPredicted RBP5.73□□□□□ -1.49
PTP4A1-204ENST00000578299 STK24Q9Y6E0 443 aa5.73□□□□□ -1.49
PTP4A1-204ENST00000578299 PLCB2Q00722 1185 aa5.72□□□□□ -1.49
PTP4A1-204ENST00000578299 SLC24A1O60721 1099 aa5.69□□□□□ -1.5
PTP4A1-204ENST00000578299 SPRYD3Q8NCJ5 442 aa5.69□□□□□ -1.5
PTP4A1-204ENST00000578299 GALR2O43603 387 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1-204ENST00000578299 TIE1P35590 1138 aa5.68□□□□□ -1.5
PTP4A1-204ENST00000578299 NKX1-1Q15270 411 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1-204ENST00000578299 PAXIP1Q6ZW49 1069 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1-204ENST00000578299 CFAP44Q96MT7 982 aa5.67□□□□□ -1.5
PTP4A1-204ENST00000578299 TMEM106CQ9BVX2 250 aa5.67□□□□□ -1.5
PTP4A1-204ENST00000578299 RYDENQ9NUL5 291 aaKnown RBP5.67□□□□□ -1.5
PTP4A1-204ENST00000578299 CABP2Q9NPB3 220 aa5.66□□□□□ -1.5
PTP4A1-204ENST00000578299 TRPC6Q9Y210 931 aa5.66□□□□□ -1.5
PTP4A1-204ENST00000578299 GABBR2O75899 941 aa5.65□□□□□ -1.5
PTP4A1-204ENST00000578299 GOLGA2Q08379 1002 aa5.65□□□□□ -1.5
PTP4A1-204ENST00000578299 TTLL13PA6NNM8 815 aa5.64□□□□□ -1.51
PTP4A1-204ENST00000578299 SOX12O15370 315 aa5.64□□□□□ -1.51
PTP4A1-204ENST00000578299 GTPBP6O43824 516 aaPredicted RBP5.64□□□□□ -1.51
PTP4A1-204ENST00000578299 EFCAB3Q8N7B9 438 aa5.64□□□□□ -1.51
PTP4A1-204ENST00000578299 BMP2KQ9NSY1 1161 aaPredicted RBP5.64□□□□□ -1.51
PTP4A1-204ENST00000578299 SP7Q8TDD2 431 aaPredicted RBP5.63□□□□□ -1.51
PTP4A1-204ENST00000578299 HAP1P54257 671 aaPredicted RBP5.62□□□□□ -1.51
PTP4A1-204ENST00000578299 MKRN3Q13064 507 aaKnown RBP5.62□□□□□ -1.51
PTP4A1-204ENST00000578299 NLRP6P59044 892 aa5.61□□□□□ -1.51
PTP4A1-204ENST00000578299 ASTLQ6HA08 431 aaPredicted RBP5.61□□□□□ -1.51
PTP4A1-204ENST00000578299 MFRPQ9BY79 579 aa5.61□□□□□ -1.51
PTP4A1-204ENST00000578299 TRIM35Q9UPQ4 493 aa5.61□□□□□ -1.51
PTP4A1-204ENST00000578299 ATMINO43313 823 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1-204ENST00000578299 DCBLD2Q96PD2 775 aa5.6□□□□□ -1.51
PTP4A1-204ENST00000578299 ATN1P54259 1190 aaPredicted RBP5.59□□□□□ -1.51
PTP4A1-204ENST00000578299 FBXO22Q8NEZ5 403 aa5.59□□□□□ -1.51
PTP4A1-204ENST00000578299 PHF8Q9UPP1 1060 aa5.59□□□□□ -1.51
PTP4A1-204ENST00000578299 IER5LQ5T953 404 aa5.57□□□□□ -1.52
PTP4A1-204ENST00000578299 ILDR1Q86SU0 546 aaPredicted RBP5.56□□□□□ -1.52
PTP4A1-204ENST00000578299 VSIG10Q8N0Z9 540 aa5.56□□□□□ -1.52
PTP4A1-204ENST00000578299 TSHZ2Q9NRE2 1034 aa5.56□□□□□ -1.52
PTP4A1-204ENST00000578299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTP4A1-204ENST00000578299 MS4A4AQ96JQ5 239 aa5.55□□□□□ -1.52
PTP4A1-204ENST00000578299 SLC39A7Q92504 469 aa5.54□□□□□ -1.52
PTP4A1-204ENST00000578299 PPP1R37O75864 691 aa5.53□□□□□ -1.52
PTP4A1-204ENST00000578299 IRX5P78411 483 aaPredicted RBP5.53□□□□□ -1.52
PTP4A1-204ENST00000578299 PELP1Q8IZL8 1130 aaKnown RBP5.53□□□□□ -1.52
PTP4A1-204ENST00000578299 OCEL1Q9H607 264 aa5.53□□□□□ -1.52
PTP4A1-204ENST00000578299 POTEIP0CG38 1075 aa5.52□□□□□ -1.53
PTP4A1-204ENST00000578299 C7P10643 843 aa5.52□□□□□ -1.53
PTP4A1-204ENST00000578299 PLCG2P16885 1265 aa5.52□□□□□ -1.53
PTP4A1-204ENST00000578299 SEC24BO95487 1268 aa5.51□□□□□ -1.53
PTP4A1-204ENST00000578299 PDCD7Q8N8D1 485 aaKnown RBP5.51□□□□□ -1.53
PTP4A1-204ENST00000578299 METRNQ9UJH8 293 aa5.5□□□□□ -1.53
PTP4A1-204ENST00000578299 KDM2AQ9Y2K7 1162 aa5.5□□□□□ -1.53
PTP4A1-204ENST00000578299 DPY19L2Q6NUT2 758 aa5.49□□□□□ -1.53
PTP4A1-204ENST00000578299 CADPS2Q86UW7 1296 aa5.48□□□□□ -1.53
PTP4A1-204ENST00000578299 L3MBTL3Q96JM7 780 aaPredicted RBP5.48□□□□□ -1.53
PTP4A1-204ENST00000578299 COLQQ9Y215 455 aaPredicted RBP5.48□□□□□ -1.53
PTP4A1-204ENST00000578299 G3V3G9 751 aa5.47□□□□□ -1.53
PTP4A1-204ENST00000578299 BOLA1Q9Y3E2 137 aa5.47□□□□□ -1.53
PTP4A1-204ENST00000578299 POTEFA5A3E0 1075 aa5.46□□□□□ -1.54
PTP4A1-204ENST00000578299 MICALL2Q8IY33 904 aa5.46□□□□□ -1.54
PTP4A1-204ENST00000578299 TMEM121BQ9BXQ6 578 aaPredicted RBP5.46□□□□□ -1.54
PTP4A1-204ENST00000578299 WDR70Q9NW82 654 aa5.45□□□□□ -1.54
PTP4A1-204ENST00000578299 PDE4AP27815 886 aa5.44□□□□□ -1.54
PTP4A1-204ENST00000578299 NCKAP5LQ9HCH0 1330 aa5.43□□□□□ -1.54
PTP4A1-204ENST00000578299 CRISPLD2Q9H0B8 497 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms