RNA–Protein interactions for RNA: ENST00000578204.1

DHX40-206, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-206ENST00000578204 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
DHX40-206ENST00000578204 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
DHX40-206ENST00000578204 MS4A3Q96HJ5 214 aa15.07■□□□□ 0
DHX40-206ENST00000578204 FAM212AQ96EL1 285 aa15.06■□□□□ 0
DHX40-206ENST00000578204 NUBP1P53384 320 aa15.04■□□□□ -0
DHX40-206ENST00000578204 KIF12Q96FN5 646 aa15.02■□□□□ -0
DHX40-206ENST00000578204 LHX8Q68G74 356 aa15.01□□□□□ -0.01
DHX40-206ENST00000578204 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
DHX40-206ENST00000578204 MAP3K13O43283 966 aa14.94□□□□□ -0.02
DHX40-206ENST00000578204 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
DHX40-206ENST00000578204 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
DHX40-206ENST00000578204 SGIP1Q9BQI5 828 aa14.9□□□□□ -0.02
DHX40-206ENST00000578204 PCDHB13Q9Y5F0 798 aa14.89□□□□□ -0.03
DHX40-206ENST00000578204 ATMINO43313 823 aaPredicted RBP14.87□□□□□ -0.03
DHX40-206ENST00000578204 TIE1P35590 1138 aa14.84□□□□□ -0.03
DHX40-206ENST00000578204 SLC39A7Q92504 469 aa14.84□□□□□ -0.03
DHX40-206ENST00000578204 GSE1Q14687 1217 aa14.83□□□□□ -0.04
DHX40-206ENST00000578204 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
DHX40-206ENST00000578204 C7P10643 843 aa14.8□□□□□ -0.04
DHX40-206ENST00000578204 BMP2KQ9NSY1 1161 aaPredicted RBP14.8□□□□□ -0.04
DHX40-206ENST00000578204 METRNQ9UJH8 293 aa14.79□□□□□ -0.04
DHX40-206ENST00000578204 ATN1P54259 1190 aaPredicted RBP14.78□□□□□ -0.04
DHX40-206ENST00000578204 SPOCK2Q92563 424 aa14.77□□□□□ -0.05
DHX40-206ENST00000578204 TRPC6Q9Y210 931 aa14.77□□□□□ -0.05
DHX40-206ENST00000578204 PYGBP11216 843 aa14.76□□□□□ -0.05
DHX40-206ENST00000578204 IFNL1Q8IU54 200 aa14.75□□□□□ -0.05
DHX40-206ENST00000578204 IFNLR1Q8IU57 520 aaPredicted RBP14.74□□□□□ -0.05
DHX40-206ENST00000578204 TTLL13PA6NNM8 815 aa14.72□□□□□ -0.05
DHX40-206ENST00000578204 TMEM106CQ9BVX2 250 aa14.66□□□□□ -0.06
DHX40-206ENST00000578204 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
DHX40-206ENST00000578204 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
DHX40-206ENST00000578204 ZNF467Q7Z7K2 595 aaPredicted RBP14.64□□□□□ -0.07
DHX40-206ENST00000578204 POTEB2H3BUK9 544 aa14.62□□□□□ -0.07
DHX40-206ENST00000578204 SEC24BO95487 1268 aa14.62□□□□□ -0.07
DHX40-206ENST00000578204 CHRM1P11229 460 aaPredicted RBP14.61□□□□□ -0.07
DHX40-206ENST00000578204 IER5LQ5T953 404 aa14.61□□□□□ -0.07
DHX40-206ENST00000578204 PCDHB8Q9UN66 801 aa14.61□□□□□ -0.07
DHX40-206ENST00000578204 MAMSTRQ6ZN01 415 aa14.6□□□□□ -0.07
DHX40-206ENST00000578204 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
DHX40-206ENST00000578204 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
DHX40-206ENST00000578204 TRIM41Q8WV44 630 aa14.52□□□□□ -0.09
DHX40-206ENST00000578204 POTEFA5A3E0 1075 aa14.49□□□□□ -0.09
DHX40-206ENST00000578204 PLCG2P16885 1265 aa14.49□□□□□ -0.09
DHX40-206ENST00000578204 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
DHX40-206ENST00000578204 COLQQ9Y215 455 aaPredicted RBP14.48□□□□□ -0.09
DHX40-206ENST00000578204 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
DHX40-206ENST00000578204 PSEN1P49768 467 aa14.44□□□□□ -0.1
DHX40-206ENST00000578204 PDAP1Q13442 181 aaKnown RBP14.44□□□□□ -0.1
DHX40-206ENST00000578204 MKRN3Q13064 507 aaKnown RBP14.4□□□□□ -0.1
DHX40-206ENST00000578204 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
DHX40-206ENST00000578204 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
DHX40-206ENST00000578204 CABP2Q9NPB3 220 aa14.27□□□□□ -0.13
DHX40-206ENST00000578204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.133e-6■■□□□ 13.5
DHX40-206ENST00000578204 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
DHX40-206ENST00000578204 SLAIN1Q8ND83 568 aa14.22□□□□□ -0.13
DHX40-206ENST00000578204 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
DHX40-206ENST00000578204 PDCD7Q8N8D1 485 aaKnown RBP14.21□□□□□ -0.13
DHX40-206ENST00000578204 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
DHX40-206ENST00000578204 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
DHX40-206ENST00000578204 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.19□□□□□ -0.14
DHX40-206ENST00000578204 C3orf67Q6ZVT6 689 aa14.17□□□□□ -0.14
DHX40-206ENST00000578204 RNF25Q96BH1 459 aaPredicted RBP14.16□□□□□ -0.14
DHX40-206ENST00000578204 G3V3G9 751 aa14.15□□□□□ -0.14
DHX40-206ENST00000578204 FAM163AQ96GL9 167 aaPredicted RBP14.15□□□□□ -0.14
DHX40-206ENST00000578204 ECM2O94769 699 aaPredicted RBP14.13□□□□□ -0.15
DHX40-206ENST00000578204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.11□□□□□ -0.15
DHX40-206ENST00000578204 POTEMA6NI47 508 aa14.11□□□□□ -0.15
DHX40-206ENST00000578204 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
DHX40-206ENST00000578204 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
DHX40-206ENST00000578204 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
DHX40-206ENST00000578204 POTEGQ6S5H5 508 aa14.09□□□□□ -0.15
DHX40-206ENST00000578204 SNPHO15079 494 aa14.05□□□□□ -0.16
DHX40-206ENST00000578204 SOX12O15370 315 aa14.04□□□□□ -0.16
DHX40-206ENST00000578204 BOLA1Q9Y3E2 137 aa14.04□□□□□ -0.16
DHX40-206ENST00000578204 DPY19L2Q6NUT2 758 aa14.03□□□□□ -0.16
DHX40-206ENST00000578204 PKD2Q13563 968 aa14.01□□□□□ -0.17
DHX40-206ENST00000578204 BCL11BQ9C0K0 894 aaPredicted RBP14□□□□□ -0.17
DHX40-206ENST00000578204 LCE2DQ5TA82 110 aaPredicted RBP13.99□□□□□ -0.17
DHX40-206ENST00000578204 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
DHX40-206ENST00000578204 STK25O00506 426 aa13.97□□□□□ -0.17
DHX40-206ENST00000578204 PCDH10Q9P2E7 1040 aa13.95□□□□□ -0.18
DHX40-206ENST00000578204 RGL2O15211 777 aa13.94□□□□□ -0.18
DHX40-206ENST00000578204 ST18O60284 1047 aa13.93□□□□□ -0.18
DHX40-206ENST00000578204 NLRP6P59044 892 aa13.92□□□□□ -0.18
DHX40-206ENST00000578204 PHF8Q9UPP1 1060 aa13.92□□□□□ -0.18
DHX40-206ENST00000578204 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
DHX40-206ENST00000578204 MICALL2Q8IY33 904 aa13.86□□□□□ -0.19
DHX40-206ENST00000578204 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
DHX40-206ENST00000578204 PLSCR2Q9NRY7 297 aa13.85□□□□□ -0.19
DHX40-206ENST00000578204 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
DHX40-206ENST00000578204 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
DHX40-206ENST00000578204 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
DHX40-206ENST00000578204 CDAN1Q8IWY9 1227 aa13.75□□□□□ -0.21
DHX40-206ENST00000578204 ZNF710Q8N1W2 664 aa13.75□□□□□ -0.21
DHX40-206ENST00000578204 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
DHX40-206ENST00000578204 EMP3P54852 163 aa13.73□□□□□ -0.21
DHX40-206ENST00000578204 MARVELD3Q96A59 401 aa13.73□□□□□ -0.21
DHX40-206ENST00000578204 HS6ST3Q8IZP7 471 aa13.7□□□□□ -0.22
DHX40-206ENST00000578204 HOXB3P14651 431 aaPredicted RBP13.69□□□□□ -0.22
DHX40-206ENST00000578204 TMEM92Q6UXU6 159 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms