RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 DNAJC5Q9H3Z4 198 aa9.95□□□□□ -0.82
KRT39-202ENST00000578029 NBR1Q14596 966 aa9.94□□□□□ -0.82
KRT39-202ENST00000578029 REM2Q8IYK8 340 aaPredicted RBP9.87□□□□□ -0.83
KRT39-202ENST00000578029 RNF25Q96BH1 459 aaPredicted RBP9.86□□□□□ -0.83
KRT39-202ENST00000578029 RIOK3O14730 519 aaKnown RBP9.85□□□□□ -0.83
KRT39-202ENST00000578029 DCAF8Q5TAQ9 597 aa9.85□□□□□ -0.83
KRT39-202ENST00000578029 NUBP1P53384 320 aa9.84□□□□□ -0.83
KRT39-202ENST00000578029 GTPBP6O43824 516 aaPredicted RBP9.79□□□□□ -0.84
KRT39-202ENST00000578029 NKX1-1Q15270 411 aaPredicted RBP9.79□□□□□ -0.84
KRT39-202ENST00000578029 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
KRT39-202ENST00000578029 FAM212AQ96EL1 285 aa9.78□□□□□ -0.84
KRT39-202ENST00000578029 STK25O00506 426 aa9.77□□□□□ -0.85
KRT39-202ENST00000578029 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
KRT39-202ENST00000578029 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
KRT39-202ENST00000578029 RYDENQ9NUL5 291 aaKnown RBP9.74□□□□□ -0.85
KRT39-202ENST00000578029 CHRM1P11229 460 aaPredicted RBP9.73□□□□□ -0.85
KRT39-202ENST00000578029 SGIP1Q9BQI5 828 aa9.72□□□□□ -0.85
KRT39-202ENST00000578029 PRR29P0C7W0 189 aa9.71□□□□□ -0.86
KRT39-202ENST00000578029 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
KRT39-202ENST00000578029 CLEC11AQ9Y240 323 aa9.68□□□□□ -0.86
KRT39-202ENST00000578029 STK24Q9Y6E0 443 aa9.68□□□□□ -0.86
KRT39-202ENST00000578029 CHRDL2Q6WN34 429 aa9.67□□□□□ -0.86
KRT39-202ENST00000578029 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
KRT39-202ENST00000578029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
KRT39-202ENST00000578029 MNX1P50219 401 aaPredicted RBP9.66□□□□□ -0.86
KRT39-202ENST00000578029 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
KRT39-202ENST00000578029 RASEFQ8IZ41 740 aa9.64□□□□□ -0.87
KRT39-202ENST00000578029 P3H3Q8IVL6 736 aa9.63□□□□□ -0.87
KRT39-202ENST00000578029 FXR2P51116 673 aaKnown RBP eCLIP9.62□□□□□ -0.87
KRT39-202ENST00000578029 PYGBP11216 843 aa9.6□□□□□ -0.87
KRT39-202ENST00000578029 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
KRT39-202ENST00000578029 ERICH6Q7L0X2 663 aa9.56□□□□□ -0.88
KRT39-202ENST00000578029 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
KRT39-202ENST00000578029 WDR70Q9NW82 654 aa9.56□□□□□ -0.88
KRT39-202ENST00000578029 TULP1O00294 542 aaPredicted RBP9.54□□□□□ -0.88
KRT39-202ENST00000578029 TMEM132AQ24JP5 1023 aa9.53□□□□□ -0.88
KRT39-202ENST00000578029 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
KRT39-202ENST00000578029 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
KRT39-202ENST00000578029 ZNF467Q7Z7K2 595 aaPredicted RBP9.51□□□□□ -0.89
KRT39-202ENST00000578029 PRKAR2AP13861 404 aaKnown RBP9.49□□□□□ -0.89
KRT39-202ENST00000578029 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.9
KRT39-202ENST00000578029 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
KRT39-202ENST00000578029 LMOD2Q6P5Q4 547 aa9.45□□□□□ -0.9
KRT39-202ENST00000578029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.9
KRT39-202ENST00000578029 CADPS2Q86UW7 1296 aa9.45□□□□□ -0.9
KRT39-202ENST00000578029 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
KRT39-202ENST00000578029 FARP1Q9Y4F1 1045 aaPredicted RBP9.41□□□□□ -0.9
KRT39-202ENST00000578029 POTEHQ6S545 545 aa9.4□□□□□ -0.9
KRT39-202ENST00000578029 ARHGEF1Q92888 912 aaKnown RBP9.38□□□□□ -0.91
KRT39-202ENST00000578029 PCDHB8Q9UN66 801 aa9.38□□□□□ -0.91
KRT39-202ENST00000578029 PCDHB13Q9Y5F0 798 aa9.38□□□□□ -0.91
KRT39-202ENST00000578029 PSEN1P49768 467 aa9.37□□□□□ -0.91
KRT39-202ENST00000578029 ZNF579Q8NAF0 562 aaKnown RBP9.37□□□□□ -0.91
KRT39-202ENST00000578029 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
KRT39-202ENST00000578029 E2F4Q16254 413 aa9.33□□□□□ -0.92
KRT39-202ENST00000578029 NLRP6P59044 892 aa9.32□□□□□ -0.92
KRT39-202ENST00000578029 ARXQ96QS3 562 aa9.32□□□□□ -0.92
KRT39-202ENST00000578029 CCDC61Q9Y6R9 512 aa9.32□□□□□ -0.92
KRT39-202ENST00000578029 C14orf37Q86TY3 774 aa9.31□□□□□ -0.92
KRT39-202ENST00000578029 SOX12O15370 315 aa9.3□□□□□ -0.92
KRT39-202ENST00000578029 PPP1R37O75864 691 aa9.29□□□□□ -0.92
KRT39-202ENST00000578029 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
KRT39-202ENST00000578029 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
KRT39-202ENST00000578029 C19orf67A6NJJ6 358 aa9.28□□□□□ -0.92
KRT39-202ENST00000578029 PAK3O75914 559 aaPredicted RBP9.27□□□□□ -0.93
KRT39-202ENST00000578029 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
KRT39-202ENST00000578029 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
KRT39-202ENST00000578029 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
KRT39-202ENST00000578029 CABP2Q9NPB3 220 aa9.26□□□□□ -0.93
KRT39-202ENST00000578029 EVX2Q03828 476 aa9.25□□□□□ -0.93
KRT39-202ENST00000578029 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
KRT39-202ENST00000578029 SEMA3EO15041 775 aa9.24□□□□□ -0.93
KRT39-202ENST00000578029 IFNL1Q8IU54 200 aa9.24□□□□□ -0.93
KRT39-202ENST00000578029 NEUROD2Q15784 382 aa9.23□□□□□ -0.93
KRT39-202ENST00000578029 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
KRT39-202ENST00000578029 PDE4AP27815 886 aa9.22□□□□□ -0.93
KRT39-202ENST00000578029 SLC24A3Q9HC58 644 aa9.22□□□□□ -0.93
KRT39-202ENST00000578029 HAX1O00165 279 aa9.21□□□□□ -0.94
KRT39-202ENST00000578029 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
KRT39-202ENST00000578029 LARP6Q9BRS8 491 aaKnown RBP9.2□□□□□ -0.94
KRT39-202ENST00000578029 MAP3K13O43283 966 aa9.19□□□□□ -0.94
KRT39-202ENST00000578029 KIF12Q96FN5 646 aa9.19□□□□□ -0.94
KRT39-202ENST00000578029 NCKAP5LQ9HCH0 1330 aa9.18□□□□□ -0.94
KRT39-202ENST00000578029 ZMYND10O75800 440 aa9.17□□□□□ -0.94
KRT39-202ENST00000578029 MFSD10Q14728 455 aa9.17□□□□□ -0.94
KRT39-202ENST00000578029 ARIH1Q9Y4X5 557 aaPredicted RBP9.17□□□□□ -0.94
KRT39-202ENST00000578029 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
KRT39-202ENST00000578029 HOMEZQ8IX15 550 aa9.15□□□□□ -0.94
KRT39-202ENST00000578029 ZRANB1Q9UGI0 708 aa9.15□□□□□ -0.94
KRT39-202ENST00000578029 CRISPLD2Q9H0B8 497 aa9.13□□□□□ -0.95
KRT39-202ENST00000578029 GOLGA2Q08379 1002 aa9.12□□□□□ -0.95
KRT39-202ENST00000578029 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
KRT39-202ENST00000578029 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
KRT39-202ENST00000578029 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
KRT39-202ENST00000578029 MS4A4AQ96JQ5 239 aa9.1□□□□□ -0.95
KRT39-202ENST00000578029 PHF12Q96QT6 1004 aa9.09□□□□□ -0.95
KRT39-202ENST00000578029 AK7Q96M32 723 aa9.07□□□□□ -0.96
KRT39-202ENST00000578029 MKRN3Q13064 507 aaKnown RBP9.05□□□□□ -0.96
KRT39-202ENST00000578029 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
KRT39-202ENST00000578029 KRI1Q8N9T8 703 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms