RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
IFT20-205ENST00000578009 PELP1Q8IZL8 1130 aaKnown RBP12.51□□□□□ -0.41
IFT20-205ENST00000578009 PCDH10Q9P2E7 1040 aa12.5□□□□□ -0.41
IFT20-205ENST00000578009 POTEB2H3BUK9 544 aa12.48□□□□□ -0.41
IFT20-205ENST00000578009 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
IFT20-205ENST00000578009 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
IFT20-205ENST00000578009 ASTLQ6HA08 431 aaPredicted RBP12.44□□□□□ -0.42
IFT20-205ENST00000578009 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
IFT20-205ENST00000578009 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
IFT20-205ENST00000578009 SLC39A7Q92504 469 aa12.4□□□□□ -0.42
IFT20-205ENST00000578009 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
IFT20-205ENST00000578009 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
IFT20-205ENST00000578009 C7P10643 843 aa12.38□□□□□ -0.43
IFT20-205ENST00000578009 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
IFT20-205ENST00000578009 MAP3K13O43283 966 aa12.34□□□□□ -0.43
IFT20-205ENST00000578009 FKBP8Q14318 412 aa12.31□□□□□ -0.44
IFT20-205ENST00000578009 TRPC6Q9Y210 931 aa12.31□□□□□ -0.44
IFT20-205ENST00000578009 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
IFT20-205ENST00000578009 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
IFT20-205ENST00000578009 POTEJP0CG39 1038 aa12.27□□□□□ -0.45
IFT20-205ENST00000578009 TIE1P35590 1138 aa12.24□□□□□ -0.45
IFT20-205ENST00000578009 MAMSTRQ6ZN01 415 aa12.24□□□□□ -0.45
IFT20-205ENST00000578009 NUBP1P53384 320 aa12.22□□□□□ -0.45
IFT20-205ENST00000578009 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
IFT20-205ENST00000578009 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
IFT20-205ENST00000578009 TTLL13PA6NNM8 815 aa12.19□□□□□ -0.46
IFT20-205ENST00000578009 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
IFT20-205ENST00000578009 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
IFT20-205ENST00000578009 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
IFT20-205ENST00000578009 SEC24BO95487 1268 aa12.17□□□□□ -0.46
IFT20-205ENST00000578009 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
IFT20-205ENST00000578009 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
IFT20-205ENST00000578009 TRIM35Q9UPQ4 493 aa12.13□□□□□ -0.47
IFT20-205ENST00000578009 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
IFT20-205ENST00000578009 IFNL1Q8IU54 200 aa12.12□□□□□ -0.47
IFT20-205ENST00000578009 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
IFT20-205ENST00000578009 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
IFT20-205ENST00000578009 FBXO3Q9UK99 471 aa12.07□□□□□ -0.48
IFT20-205ENST00000578009 IER5LQ5T953 404 aa12.06□□□□□ -0.48
IFT20-205ENST00000578009 PYGBP11216 843 aa12.03□□□□□ -0.48
IFT20-205ENST00000578009 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
IFT20-205ENST00000578009 PLCG2P16885 1265 aa11.98□□□□□ -0.49
IFT20-205ENST00000578009 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
IFT20-205ENST00000578009 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
IFT20-205ENST00000578009 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
IFT20-205ENST00000578009 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
IFT20-205ENST00000578009 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
IFT20-205ENST00000578009 GSE1Q14687 1217 aa11.88□□□□□ -0.51
IFT20-205ENST00000578009 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
IFT20-205ENST00000578009 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
IFT20-205ENST00000578009 GOLGA2Q08379 1002 aa11.8□□□□□ -0.52
IFT20-205ENST00000578009 ST18O60284 1047 aa11.79□□□□□ -0.52
IFT20-205ENST00000578009 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
IFT20-205ENST00000578009 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
IFT20-205ENST00000578009 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
IFT20-205ENST00000578009 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
IFT20-205ENST00000578009 PSEN1P49768 467 aa11.74□□□□□ -0.53
IFT20-205ENST00000578009 CIZ1Q9ULV3 898 aaPredicted RBP11.73□□□□□ -0.53
IFT20-205ENST00000578009 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
IFT20-205ENST00000578009 SPOCK2Q92563 424 aa11.72□□□□□ -0.53
IFT20-205ENST00000578009 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
IFT20-205ENST00000578009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.54
IFT20-205ENST00000578009 SNPHO15079 494 aa11.69□□□□□ -0.54
IFT20-205ENST00000578009 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
IFT20-205ENST00000578009 SPNS2Q8IVW8 549 aa11.69□□□□□ -0.54
IFT20-205ENST00000578009 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
IFT20-205ENST00000578009 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
IFT20-205ENST00000578009 TMEM121BQ9BXQ6 578 aaPredicted RBP11.64□□□□□ -0.55
IFT20-205ENST00000578009 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
IFT20-205ENST00000578009 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
IFT20-205ENST00000578009 DPY19L2Q6NUT2 758 aa11.58□□□□□ -0.56
IFT20-205ENST00000578009 G3V3G9 751 aa11.55□□□□□ -0.56
IFT20-205ENST00000578009 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
IFT20-205ENST00000578009 EMP3P54852 163 aa11.52□□□□□ -0.57
IFT20-205ENST00000578009 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.57
IFT20-205ENST00000578009 TRIM41Q8WV44 630 aa11.47□□□□□ -0.57
IFT20-205ENST00000578009 EFCAB3Q8N7B9 438 aa11.45□□□□□ -0.58
IFT20-205ENST00000578009 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
IFT20-205ENST00000578009 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
IFT20-205ENST00000578009 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
IFT20-205ENST00000578009 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
IFT20-205ENST00000578009 HOXB3P14651 431 aaPredicted RBP11.38□□□□□ -0.59
IFT20-205ENST00000578009 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
IFT20-205ENST00000578009 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
IFT20-205ENST00000578009 DOK7Q18PE1 504 aa11.34□□□□□ -0.59
IFT20-205ENST00000578009 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
IFT20-205ENST00000578009 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
IFT20-205ENST00000578009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
IFT20-205ENST00000578009 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
IFT20-205ENST00000578009 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
IFT20-205ENST00000578009 SOX12O15370 315 aa11.31□□□□□ -0.6
IFT20-205ENST00000578009 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
IFT20-205ENST00000578009 VGFO15240 615 aaPredicted RBP11.3□□□□□ -0.6
IFT20-205ENST00000578009 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
IFT20-205ENST00000578009 ERBB3P21860 1342 aa11.3□□□□□ -0.6
IFT20-205ENST00000578009 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
IFT20-205ENST00000578009 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
IFT20-205ENST00000578009 TMEM92Q6UXU6 159 aa11.26□□□□□ -0.61
IFT20-205ENST00000578009 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
IFT20-205ENST00000578009 VARS2Q5ST30 1063 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms