RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 FBXO3Q9UK99 471 aa9.26□□□□□ -0.93
CDH8-204ENST00000577536 PAK3O75914 559 aaPredicted RBP9.25□□□□□ -0.93
CDH8-204ENST00000577536 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
CDH8-204ENST00000577536 PELP1Q8IZL8 1130 aaKnown RBP9.24□□□□□ -0.93
CDH8-204ENST00000577536 PCDH10Q9P2E7 1040 aa9.19□□□□□ -0.94
CDH8-204ENST00000577536 ZBTB47Q9UFB7 747 aaPredicted RBP9.19□□□□□ -0.94
CDH8-204ENST00000577536 METRNQ9UJH8 293 aa9.18□□□□□ -0.94
CDH8-204ENST00000577536 POTEJP0CG39 1038 aa9.16□□□□□ -0.94
CDH8-204ENST00000577536 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
CDH8-204ENST00000577536 LCE2DQ5TA82 110 aaPredicted RBP9.15□□□□□ -0.94
CDH8-204ENST00000577536 TSPYL2Q9H2G4 693 aaPredicted RBP9.15□□□□□ -0.94
CDH8-204ENST00000577536 RASEFQ8IZ41 740 aa9.14□□□□□ -0.95
CDH8-204ENST00000577536 VASPP50552 380 aaPredicted RBP9.13□□□□□ -0.95
CDH8-204ENST00000577536 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
CDH8-204ENST00000577536 NUBP1P53384 320 aa9.1□□□□□ -0.95
CDH8-204ENST00000577536 MS4A3Q96HJ5 214 aa9.1□□□□□ -0.95
CDH8-204ENST00000577536 SLC39A7Q92504 469 aa9.08□□□□□ -0.96
CDH8-204ENST00000577536 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
CDH8-204ENST00000577536 ASTLQ6HA08 431 aaPredicted RBP9.07□□□□□ -0.96
CDH8-204ENST00000577536 MAMSTRQ6ZN01 415 aa9.07□□□□□ -0.96
CDH8-204ENST00000577536 C7P10643 843 aa9.06□□□□□ -0.96
CDH8-204ENST00000577536 SCUBE2Q9NQ36 999 aa9.05□□□□□ -0.96
CDH8-204ENST00000577536 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
CDH8-204ENST00000577536 FAM212AQ96EL1 285 aa9.04□□□□□ -0.96
CDH8-204ENST00000577536 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
CDH8-204ENST00000577536 MAP3K13O43283 966 aa9□□□□□ -0.97
CDH8-204ENST00000577536 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
CDH8-204ENST00000577536 DCAF8Q5TAQ9 597 aa8.98□□□□□ -0.97
CDH8-204ENST00000577536 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
CDH8-204ENST00000577536 CDAN1Q8IWY9 1227 aa8.98□□□□□ -0.97
CDH8-204ENST00000577536 SGIP1Q9BQI5 828 aa8.95□□□□□ -0.98
CDH8-204ENST00000577536 PCDHB13Q9Y5F0 798 aa8.94□□□□□ -0.98
CDH8-204ENST00000577536 POTEFA5A3E0 1075 aa8.93□□□□□ -0.98
CDH8-204ENST00000577536 SPOCK2Q92563 424 aa8.93□□□□□ -0.98
CDH8-204ENST00000577536 GSE1Q14687 1217 aa8.92□□□□□ -0.98
CDH8-204ENST00000577536 TRPC6Q9Y210 931 aa8.92□□□□□ -0.98
CDH8-204ENST00000577536 PYGBP11216 843 aa8.9□□□□□ -0.98
CDH8-204ENST00000577536 TIE1P35590 1138 aa8.9□□□□□ -0.98
CDH8-204ENST00000577536 IFNL1Q8IU54 200 aa8.89□□□□□ -0.99
CDH8-204ENST00000577536 BMP2KQ9NSY1 1161 aaPredicted RBP8.89□□□□□ -0.99
CDH8-204ENST00000577536 TTLL13PA6NNM8 815 aa8.85□□□□□ -0.99
CDH8-204ENST00000577536 CHRM1P11229 460 aaPredicted RBP8.84□□□□□ -0.99
CDH8-204ENST00000577536 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
CDH8-204ENST00000577536 COLQQ9Y215 455 aaPredicted RBP8.84□□□□□ -0.99
CDH8-204ENST00000577536 SEC24BO95487 1268 aa8.83□□□□□ -1
CDH8-204ENST00000577536 PCDHB8Q9UN66 801 aa8.82□□□□□ -1
CDH8-204ENST00000577536 ST18O60284 1047 aa8.8□□□□□ -1
CDH8-204ENST00000577536 MMRN1Q13201 1228 aa8.8□□□□□ -1
CDH8-204ENST00000577536 TMEM106CQ9BVX2 250 aa8.8□□□□□ -1
CDH8-204ENST00000577536 ZNF467Q7Z7K2 595 aaPredicted RBP8.79□□□□□ -1
CDH8-204ENST00000577536 TRIM35Q9UPQ4 493 aa8.79□□□□□ -1
CDH8-204ENST00000577536 SLAIN1Q8ND83 568 aa8.78□□□□□ -1
CDH8-204ENST00000577536 SPNS2Q8IVW8 549 aa8.76□□□□□ -1.01
CDH8-204ENST00000577536 IER5LQ5T953 404 aa8.75□□□□□ -1.01
CDH8-204ENST00000577536 TRIM41Q8WV44 630 aa8.74□□□□□ -1.01
CDH8-204ENST00000577536 PSEN1P49768 467 aa8.7□□□□□ -1.02
CDH8-204ENST00000577536 PDAP1Q13442 181 aaKnown RBP8.69□□□□□ -1.02
CDH8-204ENST00000577536 MARVELD3Q96A59 401 aa8.67□□□□□ -1.02
CDH8-204ENST00000577536 IRX5P78411 483 aaPredicted RBP8.66□□□□□ -1.02
CDH8-204ENST00000577536 PLCG2P16885 1265 aa8.65□□□□□ -1.02
CDH8-204ENST00000577536 GOLGA2Q08379 1002 aa8.65□□□□□ -1.02
CDH8-204ENST00000577536 OCEL1Q9H607 264 aa8.63□□□□□ -1.03
CDH8-204ENST00000577536 MKRN3Q13064 507 aaKnown RBP8.62□□□□□ -1.03
CDH8-204ENST00000577536 RNF25Q96BH1 459 aaPredicted RBP8.62□□□□□ -1.03
CDH8-204ENST00000577536 RIOK3O14730 519 aaKnown RBP8.61□□□□□ -1.03
CDH8-204ENST00000577536 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
CDH8-204ENST00000577536 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
CDH8-204ENST00000577536 PDCD7Q8N8D1 485 aaKnown RBP8.58□□□□□ -1.04
CDH8-204ENST00000577536 PKD2Q13563 968 aa8.57□□□□□ -1.04
CDH8-204ENST00000577536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH8-204ENST00000577536 VGFO15240 615 aaPredicted RBP8.56□□□□□ -1.04
CDH8-204ENST00000577536 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
CDH8-204ENST00000577536 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
CDH8-204ENST00000577536 ZFP91Q96JP5 570 aaPredicted RBP8.55□□□□□ -1.04
CDH8-204ENST00000577536 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
CDH8-204ENST00000577536 SNPHO15079 494 aa8.52□□□□□ -1.05
CDH8-204ENST00000577536 EMP3P54852 163 aa8.52□□□□□ -1.05
CDH8-204ENST00000577536 TAOK2Q9UL54 1235 aa8.52□□□□□ -1.05
CDH8-204ENST00000577536 EFCAB3Q8N7B9 438 aa8.51□□□□□ -1.05
CDH8-204ENST00000577536 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.51□□□□□ -1.05
CDH8-204ENST00000577536 L3MBTL3Q96JM7 780 aaPredicted RBP8.5□□□□□ -1.05
CDH8-204ENST00000577536 RGL2O15211 777 aa8.49□□□□□ -1.05
CDH8-204ENST00000577536 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
CDH8-204ENST00000577536 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
CDH8-204ENST00000577536 DPY19L2Q6NUT2 758 aa8.48□□□□□ -1.05
CDH8-204ENST00000577536 POTEB3A0JP26 581 aa8.47□□□□□ -1.05
CDH8-204ENST00000577536 FAM205CA6NFA0 338 aa8.47□□□□□ -1.05
CDH8-204ENST00000577536 POTEBQ6S5H4 581 aa8.47□□□□□ -1.05
CDH8-204ENST00000577536 SOX12O15370 315 aa8.46□□□□□ -1.06
CDH8-204ENST00000577536 HS3ST6Q96QI5 342 aa8.46□□□□□ -1.06
CDH8-204ENST00000577536 BCL11BQ9C0K0 894 aaPredicted RBP8.46□□□□□ -1.06
CDH8-204ENST00000577536 C3orf67Q6ZVT6 689 aa8.45□□□□□ -1.06
CDH8-204ENST00000577536 STK25O00506 426 aa8.44□□□□□ -1.06
CDH8-204ENST00000577536 STK24Q9Y6E0 443 aa8.44□□□□□ -1.06
CDH8-204ENST00000577536 BOLA1Q9Y3E2 137 aa8.43□□□□□ -1.06
CDH8-204ENST00000577536 G3V3G9 751 aa8.42□□□□□ -1.06
CDH8-204ENST00000577536 PHF8Q9UPP1 1060 aa8.41□□□□□ -1.06
CDH8-204ENST00000577536 MS4A4AQ96JQ5 239 aa8.4□□□□□ -1.06
CDH8-204ENST00000577536 NLRP6P59044 892 aa8.38□□□□□ -1.07
CDH8-204ENST00000577536 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms