RNA–Protein interactions for RNA: ENST00000577473.1

MIR4643-201, Transcript of microRNA 4643, humanhuman

BASIC

Gene MIR4643, Length 78 nt, Biotype miRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4643-201ENST00000577473 MAMSTRQ6ZN01 415 aa8.4□□□□□ -1.06
MIR4643-201ENST00000577473 METRNQ9UJH8 293 aa8.4□□□□□ -1.06
MIR4643-201ENST00000577473 PELP1Q8IZL8 1130 aaKnown RBP8.39□□□□□ -1.07
MIR4643-201ENST00000577473 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
MIR4643-201ENST00000577473 ATMINO43313 823 aaPredicted RBP8.37□□□□□ -1.07
MIR4643-201ENST00000577473 MIER1Q8N108 512 aa8.37□□□□□ -1.07
MIR4643-201ENST00000577473 POTEMA6NI47 508 aa8.36□□□□□ -1.07
MIR4643-201ENST00000577473 SCUBE2Q9NQ36 999 aa8.34□□□□□ -1.07
MIR4643-201ENST00000577473 POTEGQ6S5H5 508 aa8.33□□□□□ -1.08
MIR4643-201ENST00000577473 CCDC61Q9Y6R9 512 aa8.31□□□□□ -1.08
MIR4643-201ENST00000577473 ATN1P54259 1190 aaPredicted RBP8.3□□□□□ -1.08
MIR4643-201ENST00000577473 PLCD3Q8N3E9 789 aa8.29□□□□□ -1.08
MIR4643-201ENST00000577473 KIF12Q96FN5 646 aa8.29□□□□□ -1.08
MIR4643-201ENST00000577473 FAM163AQ96GL9 167 aaPredicted RBP8.29□□□□□ -1.08
MIR4643-201ENST00000577473 PCDH10Q9P2E7 1040 aa8.29□□□□□ -1.08
MIR4643-201ENST00000577473 PROM2Q8N271 834 aa8.28□□□□□ -1.08
MIR4643-201ENST00000577473 SEC24BO95487 1268 aa8.27□□□□□ -1.09
MIR4643-201ENST00000577473 MAP3K13O43283 966 aa8.25□□□□□ -1.09
MIR4643-201ENST00000577473 TIE1P35590 1138 aa8.24□□□□□ -1.09
MIR4643-201ENST00000577473 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
MIR4643-201ENST00000577473 ZBTB47Q9UFB7 747 aaPredicted RBP8.24□□□□□ -1.09
MIR4643-201ENST00000577473 POTEJP0CG39 1038 aa8.22□□□□□ -1.09
MIR4643-201ENST00000577473 RASEFQ8IZ41 740 aa8.21□□□□□ -1.1
MIR4643-201ENST00000577473 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
MIR4643-201ENST00000577473 PCDHB13Q9Y5F0 798 aa8.19□□□□□ -1.1
MIR4643-201ENST00000577473 SGIP1Q9BQI5 828 aa8.18□□□□□ -1.1
MIR4643-201ENST00000577473 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
MIR4643-201ENST00000577473 TRIM35Q9UPQ4 493 aa8.15□□□□□ -1.1
MIR4643-201ENST00000577473 FAM212AQ96EL1 285 aa8.14□□□□□ -1.11
MIR4643-201ENST00000577473 POTEFA5A3E0 1075 aa8.13□□□□□ -1.11
MIR4643-201ENST00000577473 IER5LQ5T953 404 aa8.13□□□□□ -1.11
MIR4643-201ENST00000577473 COLQQ9Y215 455 aaPredicted RBP8.12□□□□□ -1.11
MIR4643-201ENST00000577473 PLCG2P16885 1265 aa8.1□□□□□ -1.11
MIR4643-201ENST00000577473 SLAIN1Q8ND83 568 aa8.1□□□□□ -1.11
MIR4643-201ENST00000577473 TMEM106CQ9BVX2 250 aa8.1□□□□□ -1.11
MIR4643-201ENST00000577473 DCAF8Q5TAQ9 597 aa8.09□□□□□ -1.11
MIR4643-201ENST00000577473 NUBP1P53384 320 aa8.08□□□□□ -1.12
MIR4643-201ENST00000577473 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
MIR4643-201ENST00000577473 IFNL1Q8IU54 200 aa8.07□□□□□ -1.12
MIR4643-201ENST00000577473 CDAN1Q8IWY9 1227 aa8.05□□□□□ -1.12
MIR4643-201ENST00000577473 FKBP8Q14318 412 aa8.04□□□□□ -1.12
MIR4643-201ENST00000577473 OCEL1Q9H607 264 aa8.01□□□□□ -1.13
MIR4643-201ENST00000577473 FBXO3Q9UK99 471 aa8.01□□□□□ -1.13
MIR4643-201ENST00000577473 SNPHO15079 494 aa8□□□□□ -1.13
MIR4643-201ENST00000577473 PYGBP11216 843 aa8□□□□□ -1.13
MIR4643-201ENST00000577473 ST18O60284 1047 aa7.99□□□□□ -1.13
MIR4643-201ENST00000577473 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.99□□□□□ -1.13
MIR4643-201ENST00000577473 GOLGA2Q08379 1002 aa7.98□□□□□ -1.13
MIR4643-201ENST00000577473 KLHL34Q8N239 644 aa7.98□□□□□ -1.13
MIR4643-201ENST00000577473 IRX5P78411 483 aaPredicted RBP7.96□□□□□ -1.14
MIR4643-201ENST00000577473 PCDHB8Q9UN66 801 aa7.95□□□□□ -1.14
MIR4643-201ENST00000577473 MKRN3Q13064 507 aaKnown RBP7.93□□□□□ -1.14
MIR4643-201ENST00000577473 GSE1Q14687 1217 aa7.93□□□□□ -1.14
MIR4643-201ENST00000577473 TMEM121BQ9BXQ6 578 aaPredicted RBP7.93□□□□□ -1.14
MIR4643-201ENST00000577473 ZNF467Q7Z7K2 595 aaPredicted RBP7.91□□□□□ -1.14
MIR4643-201ENST00000577473 L3MBTL3Q96JM7 780 aaPredicted RBP7.91□□□□□ -1.14
MIR4643-201ENST00000577473 C3orf67Q6ZVT6 689 aa7.9□□□□□ -1.14
MIR4643-201ENST00000577473 G3V3G9 751 aa7.86□□□□□ -1.15
MIR4643-201ENST00000577473 MARVELD3Q96A59 401 aa7.86□□□□□ -1.15
MIR4643-201ENST00000577473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.85□□□□□ -1.15
MIR4643-201ENST00000577473 EMP3P54852 163 aa7.83□□□□□ -1.16
MIR4643-201ENST00000577473 SPNS2Q8IVW8 549 aa7.83□□□□□ -1.16
MIR4643-201ENST00000577473 PSEN1P49768 467 aa7.82□□□□□ -1.16
MIR4643-201ENST00000577473 MMRN1Q13201 1228 aa7.82□□□□□ -1.16
MIR4643-201ENST00000577473 CHRM1P11229 460 aaPredicted RBP7.81□□□□□ -1.16
MIR4643-201ENST00000577473 VASPP50552 380 aaPredicted RBP7.81□□□□□ -1.16
MIR4643-201ENST00000577473 PDCD7Q8N8D1 485 aaKnown RBP7.79□□□□□ -1.16
MIR4643-201ENST00000577473 CIZ1Q9ULV3 898 aaPredicted RBP7.78□□□□□ -1.16
MIR4643-201ENST00000577473 FAM205CA6NFA0 338 aa7.77□□□□□ -1.17
MIR4643-201ENST00000577473 PDAP1Q13442 181 aaKnown RBP7.77□□□□□ -1.17
MIR4643-201ENST00000577473 ZNF710Q8N1W2 664 aa7.74□□□□□ -1.17
MIR4643-201ENST00000577473 HS3ST6Q96QI5 342 aa7.74□□□□□ -1.17
MIR4643-201ENST00000577473 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
MIR4643-201ENST00000577473 SPOCK2Q92563 424 aa7.73□□□□□ -1.17
MIR4643-201ENST00000577473 BOLA1Q9Y3E2 137 aa7.72□□□□□ -1.17
MIR4643-201ENST00000577473 DPY19L2Q6NUT2 758 aa7.7□□□□□ -1.18
MIR4643-201ENST00000577473 RIMBP2O15034 1052 aa7.68□□□□□ -1.18
MIR4643-201ENST00000577473 DOK7Q18PE1 504 aa7.68□□□□□ -1.18
MIR4643-201ENST00000577473 ERBB3P21860 1342 aa7.67□□□□□ -1.18
MIR4643-201ENST00000577473 POTEB3A0JP26 581 aa7.64□□□□□ -1.19
MIR4643-201ENST00000577473 POTEBQ6S5H4 581 aa7.64□□□□□ -1.19
MIR4643-201ENST00000577473 ILDR1Q86SU0 546 aaPredicted RBP7.64□□□□□ -1.19
MIR4643-201ENST00000577473 KRTAP3-3Q9BYR6 98 aa7.63□□□□□ -1.19
MIR4643-201ENST00000577473 KRTAP3-2Q9BYR7 98 aa7.63□□□□□ -1.19
MIR4643-201ENST00000577473 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
MIR4643-201ENST00000577473 IFNLR1Q8IU57 520 aaPredicted RBP7.62□□□□□ -1.19
MIR4643-201ENST00000577473 TRIM41Q8WV44 630 aa7.62□□□□□ -1.19
MIR4643-201ENST00000577473 HOXB3P14651 431 aaPredicted RBP7.6□□□□□ -1.19
MIR4643-201ENST00000577473 EFCAB3Q8N7B9 438 aa7.6□□□□□ -1.19
MIR4643-201ENST00000577473 VARS2Q5ST30 1063 aaKnown RBP7.56□□□□□ -1.2
MIR4643-201ENST00000577473 RNF166Q96A37 237 aaPredicted RBP7.56□□□□□ -1.2
MIR4643-201ENST00000577473 SOX12O15370 315 aa7.55□□□□□ -1.2
MIR4643-201ENST00000577473 ZSWIM6Q9HCJ5 1215 aa7.55□□□□□ -1.2
MIR4643-201ENST00000577473 MICALL2Q8IY33 904 aa7.52□□□□□ -1.21
MIR4643-201ENST00000577473 MYT1LQ9UL68 1186 aa7.52□□□□□ -1.21
MIR4643-201ENST00000577473 ZNF687Q8N1G0 1237 aa7.51□□□□□ -1.21
MIR4643-201ENST00000577473 RIOK3O14730 519 aaKnown RBP7.5□□□□□ -1.21
MIR4643-201ENST00000577473 VGFO15240 615 aaPredicted RBP7.49□□□□□ -1.21
MIR4643-201ENST00000577473 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
MIR4643-201ENST00000577473 PTGER2P43116 358 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms