RNA–Protein interactions for RNA: ENST00000574194.1

ERCC4-205, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-205ENST00000574194 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
ERCC4-205ENST00000574194 NUBP1P53384 320 aa11.95□□□□□ -0.5
ERCC4-205ENST00000574194 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
ERCC4-205ENST00000574194 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
ERCC4-205ENST00000574194 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
ERCC4-205ENST00000574194 LHX8Q68G74 356 aa11.9□□□□□ -0.5
ERCC4-205ENST00000574194 MAP3K13O43283 966 aa11.88□□□□□ -0.51
ERCC4-205ENST00000574194 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
ERCC4-205ENST00000574194 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
ERCC4-205ENST00000574194 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
ERCC4-205ENST00000574194 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
ERCC4-205ENST00000574194 FAM212AQ96EL1 285 aa11.83□□□□□ -0.52
ERCC4-205ENST00000574194 ATMINO43313 823 aaPredicted RBP11.8□□□□□ -0.52
ERCC4-205ENST00000574194 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
ERCC4-205ENST00000574194 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
ERCC4-205ENST00000574194 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
ERCC4-205ENST00000574194 PYGBP11216 843 aa11.75□□□□□ -0.53
ERCC4-205ENST00000574194 IFNLR1Q8IU57 520 aaPredicted RBP11.75□□□□□ -0.53
ERCC4-205ENST00000574194 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
ERCC4-205ENST00000574194 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
ERCC4-205ENST00000574194 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
ERCC4-205ENST00000574194 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
ERCC4-205ENST00000574194 TIE1P35590 1138 aa11.68□□□□□ -0.54
ERCC4-205ENST00000574194 SLC39A7Q92504 469 aa11.68□□□□□ -0.54
ERCC4-205ENST00000574194 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
ERCC4-205ENST00000574194 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
ERCC4-205ENST00000574194 C7P10643 843 aa11.66□□□□□ -0.54
ERCC4-205ENST00000574194 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
ERCC4-205ENST00000574194 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
ERCC4-205ENST00000574194 GSE1Q14687 1217 aa11.64□□□□□ -0.55
ERCC4-205ENST00000574194 TMEM106CQ9BVX2 250 aa11.62□□□□□ -0.55
ERCC4-205ENST00000574194 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
ERCC4-205ENST00000574194 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
ERCC4-205ENST00000574194 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
ERCC4-205ENST00000574194 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
ERCC4-205ENST00000574194 POTEJP0CG39 1038 aa11.59□□□□□ -0.55
ERCC4-205ENST00000574194 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
ERCC4-205ENST00000574194 SEC24BO95487 1268 aa11.54□□□□□ -0.56
ERCC4-205ENST00000574194 CHRM1P11229 460 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-205ENST00000574194 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
ERCC4-205ENST00000574194 IER5LQ5T953 404 aa11.47□□□□□ -0.57
ERCC4-205ENST00000574194 PSEN1P49768 467 aa11.44□□□□□ -0.58
ERCC4-205ENST00000574194 PLCG2P16885 1265 aa11.42□□□□□ -0.58
ERCC4-205ENST00000574194 MAMSTRQ6ZN01 415 aa11.41□□□□□ -0.58
ERCC4-205ENST00000574194 IRX5P78411 483 aaPredicted RBP11.4□□□□□ -0.58
ERCC4-205ENST00000574194 SCUBE2Q9NQ36 999 aa11.4□□□□□ -0.58
ERCC4-205ENST00000574194 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
ERCC4-205ENST00000574194 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
ERCC4-205ENST00000574194 OCEL1Q9H607 264 aa11.36□□□□□ -0.59
ERCC4-205ENST00000574194 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
ERCC4-205ENST00000574194 CABP2Q9NPB3 220 aa11.33□□□□□ -0.6
ERCC4-205ENST00000574194 TRIM41Q8WV44 630 aa11.31□□□□□ -0.6
ERCC4-205ENST00000574194 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
ERCC4-205ENST00000574194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERCC4-205ENST00000574194 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
ERCC4-205ENST00000574194 SLAIN1Q8ND83 568 aa11.27□□□□□ -0.61
ERCC4-205ENST00000574194 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
ERCC4-205ENST00000574194 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
ERCC4-205ENST00000574194 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
ERCC4-205ENST00000574194 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
ERCC4-205ENST00000574194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.21□□□□□ -0.61
ERCC4-205ENST00000574194 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
ERCC4-205ENST00000574194 ZFP91Q96JP5 570 aaPredicted RBP11.21□□□□□ -0.61
ERCC4-205ENST00000574194 POTEMA6NI47 508 aa11.2□□□□□ -0.62
ERCC4-205ENST00000574194 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
ERCC4-205ENST00000574194 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
ERCC4-205ENST00000574194 VGFO15240 615 aaPredicted RBP11.17□□□□□ -0.62
ERCC4-205ENST00000574194 PKD2Q13563 968 aa11.17□□□□□ -0.62
ERCC4-205ENST00000574194 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
ERCC4-205ENST00000574194 L3MBTL3Q96JM7 780 aaPredicted RBP11.16□□□□□ -0.62
ERCC4-205ENST00000574194 ILDR1Q86SU0 546 aaPredicted RBP11.15□□□□□ -0.62
ERCC4-205ENST00000574194 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
ERCC4-205ENST00000574194 RGL2O15211 777 aa11.12□□□□□ -0.63
ERCC4-205ENST00000574194 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
ERCC4-205ENST00000574194 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
ERCC4-205ENST00000574194 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
ERCC4-205ENST00000574194 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
ERCC4-205ENST00000574194 G3V3G9 751 aa11.07□□□□□ -0.64
ERCC4-205ENST00000574194 ST18O60284 1047 aa11.07□□□□□ -0.64
ERCC4-205ENST00000574194 STK25O00506 426 aa11.05□□□□□ -0.64
ERCC4-205ENST00000574194 MS4A4AQ96JQ5 239 aa11.05□□□□□ -0.64
ERCC4-205ENST00000574194 SOX12O15370 315 aa11.04□□□□□ -0.64
ERCC4-205ENST00000574194 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
ERCC4-205ENST00000574194 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
ERCC4-205ENST00000574194 SNPHO15079 494 aa10.98□□□□□ -0.65
ERCC4-205ENST00000574194 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
ERCC4-205ENST00000574194 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
ERCC4-205ENST00000574194 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
ERCC4-205ENST00000574194 NLRP6P59044 892 aa10.96□□□□□ -0.65
ERCC4-205ENST00000574194 MFRPQ9BY79 579 aa10.96□□□□□ -0.65
ERCC4-205ENST00000574194 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
ERCC4-205ENST00000574194 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
ERCC4-205ENST00000574194 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
ERCC4-205ENST00000574194 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
ERCC4-205ENST00000574194 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
ERCC4-205ENST00000574194 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
ERCC4-205ENST00000574194 EMP3P54852 163 aa10.84□□□□□ -0.67
ERCC4-205ENST00000574194 PPP1R37O75864 691 aa10.83□□□□□ -0.68
ERCC4-205ENST00000574194 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
ERCC4-205ENST00000574194 FAM205CA6NFA0 338 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms