RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
CDC27-215ENST00000573550 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
CDC27-215ENST00000573550 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
CDC27-215ENST00000573550 PKD2Q13563 968 aa13.36□□□□□ -0.27
CDC27-215ENST00000573550 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
CDC27-215ENST00000573550 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
CDC27-215ENST00000573550 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
CDC27-215ENST00000573550 PYGBP11216 843 aa13.31□□□□□ -0.28
CDC27-215ENST00000573550 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
CDC27-215ENST00000573550 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
CDC27-215ENST00000573550 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
CDC27-215ENST00000573550 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.29
CDC27-215ENST00000573550 MAP3K13O43283 966 aa13.24□□□□□ -0.29
CDC27-215ENST00000573550 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
CDC27-215ENST00000573550 CLCN6P51797 869 aa13.21□□□□□ -0.29
CDC27-215ENST00000573550 GABBR2O75899 941 aa13.2□□□□□ -0.3
CDC27-215ENST00000573550 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
CDC27-215ENST00000573550 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
CDC27-215ENST00000573550 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
CDC27-215ENST00000573550 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
CDC27-215ENST00000573550 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
CDC27-215ENST00000573550 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
CDC27-215ENST00000573550 RGL2O15211 777 aa13.14□□□□□ -0.31
CDC27-215ENST00000573550 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
CDC27-215ENST00000573550 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
CDC27-215ENST00000573550 TRPC6Q9Y210 931 aa13.1□□□□□ -0.31
CDC27-215ENST00000573550 RIOK3O14730 519 aaKnown RBP13.09□□□□□ -0.31
CDC27-215ENST00000573550 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
CDC27-215ENST00000573550 TIE1P35590 1138 aa13.01□□□□□ -0.33
CDC27-215ENST00000573550 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
CDC27-215ENST00000573550 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
CDC27-215ENST00000573550 PSEN1P49768 467 aa12.98□□□□□ -0.33
CDC27-215ENST00000573550 TTLL13PA6NNM8 815 aa12.97□□□□□ -0.33
CDC27-215ENST00000573550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.96□□□□□ -0.33
CDC27-215ENST00000573550 POTEIP0CG38 1075 aa12.96□□□□□ -0.33
CDC27-215ENST00000573550 ZFP91Q96JP5 570 aaPredicted RBP12.96□□□□□ -0.33
CDC27-215ENST00000573550 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
CDC27-215ENST00000573550 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
CDC27-215ENST00000573550 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
CDC27-215ENST00000573550 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
CDC27-215ENST00000573550 ATMINO43313 823 aaPredicted RBP12.94□□□□□ -0.34
CDC27-215ENST00000573550 DCAF8L2P0C7V8 631 aa12.91□□□□□ -0.34
CDC27-215ENST00000573550 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
CDC27-215ENST00000573550 STK25O00506 426 aa12.88□□□□□ -0.35
CDC27-215ENST00000573550 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
CDC27-215ENST00000573550 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
CDC27-215ENST00000573550 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
CDC27-215ENST00000573550 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
CDC27-215ENST00000573550 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
CDC27-215ENST00000573550 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
CDC27-215ENST00000573550 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
CDC27-215ENST00000573550 EFCAB3Q8N7B9 438 aa12.77□□□□□ -0.37
CDC27-215ENST00000573550 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
CDC27-215ENST00000573550 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
CDC27-215ENST00000573550 IER5LQ5T953 404 aa12.75□□□□□ -0.37
CDC27-215ENST00000573550 SLC39A7Q92504 469 aa12.75□□□□□ -0.37
CDC27-215ENST00000573550 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
CDC27-215ENST00000573550 C7P10643 843 aa12.72□□□□□ -0.37
CDC27-215ENST00000573550 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
CDC27-215ENST00000573550 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
CDC27-215ENST00000573550 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.37
CDC27-215ENST00000573550 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
CDC27-215ENST00000573550 SOX12O15370 315 aa12.69□□□□□ -0.38
CDC27-215ENST00000573550 POTEFA5A3E0 1075 aa12.68□□□□□ -0.38
CDC27-215ENST00000573550 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
CDC27-215ENST00000573550 COLQQ9Y215 455 aaPredicted RBP12.67□□□□□ -0.38
CDC27-215ENST00000573550 BBXQ8WY36 941 aaPredicted RBP12.66□□□□□ -0.38
CDC27-215ENST00000573550 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
CDC27-215ENST00000573550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.387e-8■■■■■ 28.7
CDC27-215ENST00000573550 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
CDC27-215ENST00000573550 FBXO22Q8NEZ5 403 aa12.64□□□□□ -0.39
CDC27-215ENST00000573550 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
CDC27-215ENST00000573550 SEC24BO95487 1268 aa12.62□□□□□ -0.39
CDC27-215ENST00000573550 PLCG2P16885 1265 aa12.62□□□□□ -0.39
CDC27-215ENST00000573550 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
CDC27-215ENST00000573550 NLRP6P59044 892 aa12.61□□□□□ -0.39
CDC27-215ENST00000573550 GTPBP6O43824 516 aaPredicted RBP12.57□□□□□ -0.4
CDC27-215ENST00000573550 POTEB2H3BUK9 544 aa12.55□□□□□ -0.4
CDC27-215ENST00000573550 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
CDC27-215ENST00000573550 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.54□□□□□ -0.4
CDC27-215ENST00000573550 RYDENQ9NUL5 291 aaKnown RBP12.52□□□□□ -0.41
CDC27-215ENST00000573550 POTEJP0CG39 1038 aa12.5□□□□□ -0.41
CDC27-215ENST00000573550 PPP1R37O75864 691 aa12.49□□□□□ -0.41
CDC27-215ENST00000573550 SPRYD3Q8NCJ5 442 aa12.47□□□□□ -0.41
CDC27-215ENST00000573550 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
CDC27-215ENST00000573550 L3MBTL3Q96JM7 780 aaPredicted RBP12.45□□□□□ -0.42
CDC27-215ENST00000573550 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
CDC27-215ENST00000573550 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CDC27-215ENST00000573550 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
CDC27-215ENST00000573550 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
CDC27-215ENST00000573550 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
CDC27-215ENST00000573550 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
CDC27-215ENST00000573550 G3V3G9 751 aa12.37□□□□□ -0.43
CDC27-215ENST00000573550 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
CDC27-215ENST00000573550 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
CDC27-215ENST00000573550 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
CDC27-215ENST00000573550 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
CDC27-215ENST00000573550 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.3□□□□□ -0.44
CDC27-215ENST00000573550 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
CDC27-215ENST00000573550 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms