RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
ERCC4-204ENST00000573018 ASTLQ6HA08 431 aaPredicted RBP12.65□□□□□ -0.38
ERCC4-204ENST00000573018 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
ERCC4-204ENST00000573018 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
ERCC4-204ENST00000573018 KIF12Q96FN5 646 aa12.6□□□□□ -0.39
ERCC4-204ENST00000573018 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
ERCC4-204ENST00000573018 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
ERCC4-204ENST00000573018 C7P10643 843 aa12.56□□□□□ -0.4
ERCC4-204ENST00000573018 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
ERCC4-204ENST00000573018 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
ERCC4-204ENST00000573018 TRPC6Q9Y210 931 aa12.55□□□□□ -0.4
ERCC4-204ENST00000573018 MAP3K13O43283 966 aa12.54□□□□□ -0.4
ERCC4-204ENST00000573018 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
ERCC4-204ENST00000573018 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
ERCC4-204ENST00000573018 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
ERCC4-204ENST00000573018 FKBP8Q14318 412 aa12.47□□□□□ -0.41
ERCC4-204ENST00000573018 TIE1P35590 1138 aa12.43□□□□□ -0.42
ERCC4-204ENST00000573018 POTEMA6NI47 508 aa12.42□□□□□ -0.42
ERCC4-204ENST00000573018 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
ERCC4-204ENST00000573018 NUBP1P53384 320 aa12.41□□□□□ -0.42
ERCC4-204ENST00000573018 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
ERCC4-204ENST00000573018 TTLL13PA6NNM8 815 aa12.4□□□□□ -0.42
ERCC4-204ENST00000573018 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
ERCC4-204ENST00000573018 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
ERCC4-204ENST00000573018 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
ERCC4-204ENST00000573018 SCUBE2Q9NQ36 999 aa12.37□□□□□ -0.43
ERCC4-204ENST00000573018 SEC24BO95487 1268 aa12.34□□□□□ -0.43
ERCC4-204ENST00000573018 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
ERCC4-204ENST00000573018 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
ERCC4-204ENST00000573018 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
ERCC4-204ENST00000573018 IFNL1Q8IU54 200 aa12.32□□□□□ -0.44
ERCC4-204ENST00000573018 SGIP1Q9BQI5 828 aa12.32□□□□□ -0.44
ERCC4-204ENST00000573018 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
ERCC4-204ENST00000573018 LCE2DQ5TA82 110 aaPredicted RBP12.26□□□□□ -0.45
ERCC4-204ENST00000573018 TMEM106CQ9BVX2 250 aa12.26□□□□□ -0.45
ERCC4-204ENST00000573018 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
ERCC4-204ENST00000573018 IER5LQ5T953 404 aa12.23□□□□□ -0.45
ERCC4-204ENST00000573018 PYGBP11216 843 aa12.22□□□□□ -0.45
ERCC4-204ENST00000573018 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
ERCC4-204ENST00000573018 PLCG2P16885 1265 aa12.15□□□□□ -0.46
ERCC4-204ENST00000573018 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
ERCC4-204ENST00000573018 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
ERCC4-204ENST00000573018 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
ERCC4-204ENST00000573018 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
ERCC4-204ENST00000573018 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
ERCC4-204ENST00000573018 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
ERCC4-204ENST00000573018 OCEL1Q9H607 264 aa12.04□□□□□ -0.48
ERCC4-204ENST00000573018 GSE1Q14687 1217 aa12.02□□□□□ -0.49
ERCC4-204ENST00000573018 ST18O60284 1047 aa12□□□□□ -0.49
ERCC4-204ENST00000573018 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
ERCC4-204ENST00000573018 ZNF467Q7Z7K2 595 aaPredicted RBP11.97□□□□□ -0.49
ERCC4-204ENST00000573018 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
ERCC4-204ENST00000573018 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
ERCC4-204ENST00000573018 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
ERCC4-204ENST00000573018 PDCD7Q8N8D1 485 aaKnown RBP11.91□□□□□ -0.5
ERCC4-204ENST00000573018 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
ERCC4-204ENST00000573018 PSEN1P49768 467 aa11.9□□□□□ -0.5
ERCC4-204ENST00000573018 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
ERCC4-204ENST00000573018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.51
ERCC4-204ENST00000573018 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
ERCC4-204ENST00000573018 C3orf67Q6ZVT6 689 aa11.86□□□□□ -0.51
ERCC4-204ENST00000573018 SPOCK2Q92563 424 aa11.85□□□□□ -0.51
ERCC4-204ENST00000573018 SNPHO15079 494 aa11.84□□□□□ -0.51
ERCC4-204ENST00000573018 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
ERCC4-204ENST00000573018 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
ERCC4-204ENST00000573018 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
ERCC4-204ENST00000573018 TMEM121BQ9BXQ6 578 aaPredicted RBP11.81□□□□□ -0.52
ERCC4-204ENST00000573018 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
ERCC4-204ENST00000573018 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
ERCC4-204ENST00000573018 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
ERCC4-204ENST00000573018 EMP3P54852 163 aa11.71□□□□□ -0.53
ERCC4-204ENST00000573018 G3V3G9 751 aa11.68□□□□□ -0.54
ERCC4-204ENST00000573018 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
ERCC4-204ENST00000573018 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
ERCC4-204ENST00000573018 MMRN1Q13201 1228 aa11.66□□□□□ -0.54
ERCC4-204ENST00000573018 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
ERCC4-204ENST00000573018 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
ERCC4-204ENST00000573018 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
ERCC4-204ENST00000573018 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
ERCC4-204ENST00000573018 HS3ST6Q96QI5 342 aa11.62□□□□□ -0.55
ERCC4-204ENST00000573018 HOXB3P14651 431 aaPredicted RBP11.58□□□□□ -0.56
ERCC4-204ENST00000573018 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
ERCC4-204ENST00000573018 KRTAP3-3Q9BYR6 98 aa11.56□□□□□ -0.56
ERCC4-204ENST00000573018 KRTAP3-2Q9BYR7 98 aa11.56□□□□□ -0.56
ERCC4-204ENST00000573018 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
ERCC4-204ENST00000573018 RIOK3O14730 519 aaKnown RBP11.51□□□□□ -0.57
ERCC4-204ENST00000573018 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
ERCC4-204ENST00000573018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
ERCC4-204ENST00000573018 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
ERCC4-204ENST00000573018 MICALL2Q8IY33 904 aa11.49□□□□□ -0.57
ERCC4-204ENST00000573018 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
ERCC4-204ENST00000573018 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
ERCC4-204ENST00000573018 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
ERCC4-204ENST00000573018 ERBB3P21860 1342 aa11.46□□□□□ -0.57
ERCC4-204ENST00000573018 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
ERCC4-204ENST00000573018 MS4A4AQ96JQ5 239 aa11.45□□□□□ -0.58
ERCC4-204ENST00000573018 SOX12O15370 315 aa11.44□□□□□ -0.58
ERCC4-204ENST00000573018 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
ERCC4-204ENST00000573018 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
ERCC4-204ENST00000573018 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms