RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 CCDC61Q9Y6R9 512 aa14.22□□□□□ -0.13
TOM1L1-215ENST00000572905 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
TOM1L1-215ENST00000572905 NUBP1P53384 320 aa14.18□□□□□ -0.14
TOM1L1-215ENST00000572905 MS4A3Q96HJ5 214 aa14.17□□□□□ -0.14
TOM1L1-215ENST00000572905 KLHL34Q8N239 644 aa14.12□□□□□ -0.15
TOM1L1-215ENST00000572905 KIF12Q96FN5 646 aa14.11□□□□□ -0.15
TOM1L1-215ENST00000572905 FAM212AQ96EL1 285 aa14.1□□□□□ -0.15
TOM1L1-215ENST00000572905 MAP3K13O43283 966 aa14.07□□□□□ -0.16
TOM1L1-215ENST00000572905 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
TOM1L1-215ENST00000572905 LHX8Q68G74 356 aa14.03□□□□□ -0.16
TOM1L1-215ENST00000572905 TRPC6Q9Y210 931 aa13.99□□□□□ -0.17
TOM1L1-215ENST00000572905 IFNLR1Q8IU57 520 aaPredicted RBP13.98□□□□□ -0.17
TOM1L1-215ENST00000572905 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
TOM1L1-215ENST00000572905 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
TOM1L1-215ENST00000572905 ATMINO43313 823 aaPredicted RBP13.97□□□□□ -0.17
TOM1L1-215ENST00000572905 ASTLQ6HA08 431 aaPredicted RBP13.97□□□□□ -0.17
TOM1L1-215ENST00000572905 PYGBP11216 843 aa13.95□□□□□ -0.18
TOM1L1-215ENST00000572905 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
TOM1L1-215ENST00000572905 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
TOM1L1-215ENST00000572905 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
TOM1L1-215ENST00000572905 SGIP1Q9BQI5 828 aa13.9□□□□□ -0.18
TOM1L1-215ENST00000572905 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
TOM1L1-215ENST00000572905 GSE1Q14687 1217 aa13.88□□□□□ -0.19
TOM1L1-215ENST00000572905 TIE1P35590 1138 aa13.87□□□□□ -0.19
TOM1L1-215ENST00000572905 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
TOM1L1-215ENST00000572905 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
TOM1L1-215ENST00000572905 SLC39A7Q92504 469 aa13.84□□□□□ -0.19
TOM1L1-215ENST00000572905 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
TOM1L1-215ENST00000572905 C7P10643 843 aa13.81□□□□□ -0.2
TOM1L1-215ENST00000572905 POTEB2H3BUK9 544 aa13.8□□□□□ -0.2
TOM1L1-215ENST00000572905 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
TOM1L1-215ENST00000572905 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
TOM1L1-215ENST00000572905 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
TOM1L1-215ENST00000572905 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
TOM1L1-215ENST00000572905 ZNF467Q7Z7K2 595 aaPredicted RBP13.69□□□□□ -0.22
TOM1L1-215ENST00000572905 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
TOM1L1-215ENST00000572905 SEC24BO95487 1268 aa13.68□□□□□ -0.22
TOM1L1-215ENST00000572905 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
TOM1L1-215ENST00000572905 POTEJP0CG39 1038 aa13.65□□□□□ -0.22
TOM1L1-215ENST00000572905 COLQQ9Y215 455 aaPredicted RBP13.65□□□□□ -0.22
TOM1L1-215ENST00000572905 IER5LQ5T953 404 aa13.63□□□□□ -0.23
TOM1L1-215ENST00000572905 PSEN1P49768 467 aa13.58□□□□□ -0.24
TOM1L1-215ENST00000572905 PLCG2P16885 1265 aa13.54□□□□□ -0.24
TOM1L1-215ENST00000572905 GOLGA2Q08379 1002 aa13.54□□□□□ -0.24
TOM1L1-215ENST00000572905 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
TOM1L1-215ENST00000572905 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
TOM1L1-215ENST00000572905 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
TOM1L1-215ENST00000572905 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
TOM1L1-215ENST00000572905 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
TOM1L1-215ENST00000572905 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
TOM1L1-215ENST00000572905 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
TOM1L1-215ENST00000572905 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
TOM1L1-215ENST00000572905 RNF25Q96BH1 459 aaPredicted RBP13.43□□□□□ -0.26
TOM1L1-215ENST00000572905 RIOK3O14730 519 aaKnown RBP13.41□□□□□ -0.26
TOM1L1-215ENST00000572905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.27
TOM1L1-215ENST00000572905 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
TOM1L1-215ENST00000572905 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
TOM1L1-215ENST00000572905 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
TOM1L1-215ENST00000572905 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
TOM1L1-215ENST00000572905 ZFP91Q96JP5 570 aaPredicted RBP13.33□□□□□ -0.28
TOM1L1-215ENST00000572905 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
TOM1L1-215ENST00000572905 PKD2Q13563 968 aa13.3□□□□□ -0.28
TOM1L1-215ENST00000572905 EFCAB3Q8N7B9 438 aa13.3□□□□□ -0.28
TOM1L1-215ENST00000572905 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
TOM1L1-215ENST00000572905 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
TOM1L1-215ENST00000572905 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
TOM1L1-215ENST00000572905 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
TOM1L1-215ENST00000572905 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
TOM1L1-215ENST00000572905 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.26□□□□□ -0.29
TOM1L1-215ENST00000572905 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
TOM1L1-215ENST00000572905 RGL2O15211 777 aa13.22□□□□□ -0.29
TOM1L1-215ENST00000572905 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
TOM1L1-215ENST00000572905 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
TOM1L1-215ENST00000572905 POTEMA6NI47 508 aa13.2□□□□□ -0.3
TOM1L1-215ENST00000572905 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
TOM1L1-215ENST00000572905 G3V3G9 751 aa13.19□□□□□ -0.3
TOM1L1-215ENST00000572905 LCE2DQ5TA82 110 aaPredicted RBP13.19□□□□□ -0.3
TOM1L1-215ENST00000572905 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
TOM1L1-215ENST00000572905 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
TOM1L1-215ENST00000572905 STK25O00506 426 aa13.17□□□□□ -0.3
TOM1L1-215ENST00000572905 BOLA1Q9Y3E2 137 aa13.17□□□□□ -0.3
TOM1L1-215ENST00000572905 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
TOM1L1-215ENST00000572905 SOX12O15370 315 aa13.14□□□□□ -0.31
TOM1L1-215ENST00000572905 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
TOM1L1-215ENST00000572905 ST18O60284 1047 aa13.08□□□□□ -0.32
TOM1L1-215ENST00000572905 SNPHO15079 494 aa13.05□□□□□ -0.32
TOM1L1-215ENST00000572905 NLRP6P59044 892 aa13.05□□□□□ -0.32
TOM1L1-215ENST00000572905 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
TOM1L1-215ENST00000572905 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
TOM1L1-215ENST00000572905 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
TOM1L1-215ENST00000572905 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
TOM1L1-215ENST00000572905 PLSCR2Q9NRY7 297 aa12.99□□□□□ -0.33
TOM1L1-215ENST00000572905 TMEM92Q6UXU6 159 aa12.94□□□□□ -0.34
TOM1L1-215ENST00000572905 MARVELD3Q96A59 401 aa12.93□□□□□ -0.34
TOM1L1-215ENST00000572905 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
TOM1L1-215ENST00000572905 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
TOM1L1-215ENST00000572905 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
TOM1L1-215ENST00000572905 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
TOM1L1-215ENST00000572905 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
TOM1L1-215ENST00000572905 EMP3P54852 163 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms