RNA–Protein interactions for RNA: ENST00000570231.1

THUMPD1-205, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 1,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-205ENST00000570231 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
THUMPD1-205ENST00000570231 MIER1Q8N108 512 aa12.97□□□□□ -0.33
THUMPD1-205ENST00000570231 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
THUMPD1-205ENST00000570231 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
THUMPD1-205ENST00000570231 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
THUMPD1-205ENST00000570231 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
THUMPD1-205ENST00000570231 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
THUMPD1-205ENST00000570231 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
THUMPD1-205ENST00000570231 GALR2O43603 387 aaPredicted RBP12.78□□□□□ -0.36
THUMPD1-205ENST00000570231 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
THUMPD1-205ENST00000570231 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
THUMPD1-205ENST00000570231 LHX8Q68G74 356 aa12.71□□□□□ -0.37
THUMPD1-205ENST00000570231 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
THUMPD1-205ENST00000570231 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.37
THUMPD1-205ENST00000570231 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
THUMPD1-205ENST00000570231 MS4A3Q96HJ5 214 aa12.68□□□□□ -0.38
THUMPD1-205ENST00000570231 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
THUMPD1-205ENST00000570231 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
THUMPD1-205ENST00000570231 NUBP1P53384 320 aa12.61□□□□□ -0.39
THUMPD1-205ENST00000570231 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
THUMPD1-205ENST00000570231 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
THUMPD1-205ENST00000570231 MAP3K13O43283 966 aa12.56□□□□□ -0.4
THUMPD1-205ENST00000570231 ASTLQ6HA08 431 aaPredicted RBP12.56□□□□□ -0.4
THUMPD1-205ENST00000570231 SGIP1Q9BQI5 828 aa12.54□□□□□ -0.4
THUMPD1-205ENST00000570231 ATMINO43313 823 aaPredicted RBP12.53□□□□□ -0.4
THUMPD1-205ENST00000570231 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
THUMPD1-205ENST00000570231 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
THUMPD1-205ENST00000570231 CECR2Q9BXF3 1484 aa12.52□□□□□ -0.41
THUMPD1-205ENST00000570231 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
THUMPD1-205ENST00000570231 TIE1P35590 1138 aa12.5□□□□□ -0.41
THUMPD1-205ENST00000570231 C7P10643 843 aa12.49□□□□□ -0.41
THUMPD1-205ENST00000570231 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
THUMPD1-205ENST00000570231 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
THUMPD1-205ENST00000570231 GSE1Q14687 1217 aa12.45□□□□□ -0.42
THUMPD1-205ENST00000570231 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
THUMPD1-205ENST00000570231 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
THUMPD1-205ENST00000570231 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
THUMPD1-205ENST00000570231 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
THUMPD1-205ENST00000570231 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
THUMPD1-205ENST00000570231 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
THUMPD1-205ENST00000570231 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
THUMPD1-205ENST00000570231 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
THUMPD1-205ENST00000570231 PYGBP11216 843 aa12.38□□□□□ -0.43
THUMPD1-205ENST00000570231 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
THUMPD1-205ENST00000570231 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
THUMPD1-205ENST00000570231 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
THUMPD1-205ENST00000570231 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
THUMPD1-205ENST00000570231 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
THUMPD1-205ENST00000570231 POTEB2H3BUK9 544 aa12.33□□□□□ -0.44
THUMPD1-205ENST00000570231 SEC24BO95487 1268 aa12.32□□□□□ -0.44
THUMPD1-205ENST00000570231 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
THUMPD1-205ENST00000570231 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
THUMPD1-205ENST00000570231 IER5LQ5T953 404 aa12.31□□□□□ -0.44
THUMPD1-205ENST00000570231 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
THUMPD1-205ENST00000570231 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
THUMPD1-205ENST00000570231 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
THUMPD1-205ENST00000570231 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.45
THUMPD1-205ENST00000570231 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
THUMPD1-205ENST00000570231 WIZO95785 1651 aa12.26□□□□□ -0.45
THUMPD1-205ENST00000570231 SCUBE2Q9NQ36 999 aa12.26□□□□□ -0.45
THUMPD1-205ENST00000570231 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
THUMPD1-205ENST00000570231 ATAD2BQ9ULI0 1458 aa12.24□□□□□ -0.45
THUMPD1-205ENST00000570231 CC2D2AQ9P2K1 1620 aa12.23□□□□□ -0.45
THUMPD1-205ENST00000570231 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
THUMPD1-205ENST00000570231 PLCG2P16885 1265 aa12.2□□□□□ -0.46
THUMPD1-205ENST00000570231 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
THUMPD1-205ENST00000570231 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
THUMPD1-205ENST00000570231 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
THUMPD1-205ENST00000570231 GOLGA2Q08379 1002 aa12.18□□□□□ -0.46
THUMPD1-205ENST00000570231 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
THUMPD1-205ENST00000570231 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
THUMPD1-205ENST00000570231 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
THUMPD1-205ENST00000570231 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
THUMPD1-205ENST00000570231 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
THUMPD1-205ENST00000570231 PSEN1P49768 467 aa12.12□□□□□ -0.47
THUMPD1-205ENST00000570231 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
THUMPD1-205ENST00000570231 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
THUMPD1-205ENST00000570231 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
THUMPD1-205ENST00000570231 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
THUMPD1-205ENST00000570231 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
THUMPD1-205ENST00000570231 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
THUMPD1-205ENST00000570231 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
THUMPD1-205ENST00000570231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.99□□□□□ -0.498e-10■□□□□ 10.5
THUMPD1-205ENST00000570231 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
THUMPD1-205ENST00000570231 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
THUMPD1-205ENST00000570231 FAM163AQ96GL9 167 aaPredicted RBP11.97□□□□□ -0.49
THUMPD1-205ENST00000570231 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
THUMPD1-205ENST00000570231 POTEMA6NI47 508 aa11.95□□□□□ -0.5
THUMPD1-205ENST00000570231 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
THUMPD1-205ENST00000570231 PDCD7Q8N8D1 485 aaKnown RBP11.93□□□□□ -0.5
THUMPD1-205ENST00000570231 G3V3G9 751 aa11.92□□□□□ -0.5
THUMPD1-205ENST00000570231 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
THUMPD1-205ENST00000570231 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
THUMPD1-205ENST00000570231 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
THUMPD1-205ENST00000570231 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
THUMPD1-205ENST00000570231 SNPHO15079 494 aa11.87□□□□□ -0.51
THUMPD1-205ENST00000570231 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
THUMPD1-205ENST00000570231 NESP48681 1621 aa11.85□□□□□ -0.51
THUMPD1-205ENST00000570231 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
THUMPD1-205ENST00000570231 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms