RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
UBR1-211ENST00000569971 ATMINO43313 823 aaPredicted RBP9.89□□□□□ -0.83
UBR1-211ENST00000569971 C7P10643 843 aa9.89□□□□□ -0.83
UBR1-211ENST00000569971 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
UBR1-211ENST00000569971 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
UBR1-211ENST00000569971 PLCD3Q8N3E9 789 aa9.86□□□□□ -0.83
UBR1-211ENST00000569971 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
UBR1-211ENST00000569971 OTUD5Q96G74 571 aa9.85□□□□□ -0.83
UBR1-211ENST00000569971 SGIP1Q9BQI5 828 aa9.85□□□□□ -0.83
UBR1-211ENST00000569971 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
UBR1-211ENST00000569971 TIE1P35590 1138 aa9.83□□□□□ -0.84
UBR1-211ENST00000569971 POTEB2H3BUK9 544 aa9.82□□□□□ -0.84
UBR1-211ENST00000569971 FKBP8Q14318 412 aa9.81□□□□□ -0.84
UBR1-211ENST00000569971 MAMSTRQ6ZN01 415 aa9.81□□□□□ -0.84
UBR1-211ENST00000569971 MAP3K13O43283 966 aa9.79□□□□□ -0.84
UBR1-211ENST00000569971 ATN1P54259 1190 aaPredicted RBP9.78□□□□□ -0.84
UBR1-211ENST00000569971 NUBP1P53384 320 aa9.77□□□□□ -0.85
UBR1-211ENST00000569971 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
UBR1-211ENST00000569971 FBXO3Q9UK99 471 aa9.77□□□□□ -0.85
UBR1-211ENST00000569971 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
UBR1-211ENST00000569971 IER5LQ5T953 404 aa9.73□□□□□ -0.85
UBR1-211ENST00000569971 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.86
UBR1-211ENST00000569971 SCUBE2Q9NQ36 999 aa9.71□□□□□ -0.86
UBR1-211ENST00000569971 PCDHB13Q9Y5F0 798 aa9.71□□□□□ -0.86
UBR1-211ENST00000569971 TRPC6Q9Y210 931 aa9.69□□□□□ -0.86
UBR1-211ENST00000569971 POTEJP0CG39 1038 aa9.68□□□□□ -0.86
UBR1-211ENST00000569971 POTEFA5A3E0 1075 aa9.65□□□□□ -0.86
UBR1-211ENST00000569971 IFNL1Q8IU54 200 aa9.64□□□□□ -0.87
UBR1-211ENST00000569971 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
UBR1-211ENST00000569971 SEC24BO95487 1268 aa9.63□□□□□ -0.87
UBR1-211ENST00000569971 PCDH10Q9P2E7 1040 aa9.62□□□□□ -0.87
UBR1-211ENST00000569971 POTEMA6NI47 508 aa9.61□□□□□ -0.87
UBR1-211ENST00000569971 VASPP50552 380 aaPredicted RBP9.58□□□□□ -0.88
UBR1-211ENST00000569971 POTEGQ6S5H5 508 aa9.58□□□□□ -0.88
UBR1-211ENST00000569971 TMEM106CQ9BVX2 250 aa9.58□□□□□ -0.88
UBR1-211ENST00000569971 COLQQ9Y215 455 aaPredicted RBP9.58□□□□□ -0.88
UBR1-211ENST00000569971 GSE1Q14687 1217 aa9.57□□□□□ -0.88
UBR1-211ENST00000569971 DCAF8Q5TAQ9 597 aa9.56□□□□□ -0.88
UBR1-211ENST00000569971 PLCG2P16885 1265 aa9.53□□□□□ -0.88
UBR1-211ENST00000569971 IRX5P78411 483 aaPredicted RBP9.52□□□□□ -0.89
UBR1-211ENST00000569971 ZNF467Q7Z7K2 595 aaPredicted RBP9.52□□□□□ -0.89
UBR1-211ENST00000569971 PYGBP11216 843 aa9.51□□□□□ -0.89
UBR1-211ENST00000569971 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
UBR1-211ENST00000569971 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
UBR1-211ENST00000569971 KLHL34Q8N239 644 aa9.5□□□□□ -0.89
UBR1-211ENST00000569971 PLSCR2Q9NRY7 297 aa9.5□□□□□ -0.89
UBR1-211ENST00000569971 OCEL1Q9H607 264 aa9.48□□□□□ -0.89
UBR1-211ENST00000569971 FAM163AQ96GL9 167 aaPredicted RBP9.45□□□□□ -0.9
UBR1-211ENST00000569971 PCDHB8Q9UN66 801 aa9.44□□□□□ -0.9
UBR1-211ENST00000569971 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
UBR1-211ENST00000569971 RTN4Q9NQC3 1192 aaKnown RBP9.41□□□□□ -0.9
UBR1-211ENST00000569971 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
UBR1-211ENST00000569971 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
UBR1-211ENST00000569971 SNPHO15079 494 aa9.38□□□□□ -0.91
UBR1-211ENST00000569971 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
UBR1-211ENST00000569971 TMEM121BQ9BXQ6 578 aaPredicted RBP9.37□□□□□ -0.91
UBR1-211ENST00000569971 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
UBR1-211ENST00000569971 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
UBR1-211ENST00000569971 AMER1Q5JTC6 1135 aaPredicted RBP9.36□□□□□ -0.91
UBR1-211ENST00000569971 PDCD7Q8N8D1 485 aaKnown RBP9.36□□□□□ -0.91
UBR1-211ENST00000569971 PSEN1P49768 467 aa9.35□□□□□ -0.91
UBR1-211ENST00000569971 IFNLR1Q8IU57 520 aaPredicted RBP9.35□□□□□ -0.91
UBR1-211ENST00000569971 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
UBR1-211ENST00000569971 L3MBTL3Q96JM7 780 aaPredicted RBP9.35□□□□□ -0.91
UBR1-211ENST00000569971 ILDR1Q86SU0 546 aaPredicted RBP9.34□□□□□ -0.91
UBR1-211ENST00000569971 ST18O60284 1047 aa9.32□□□□□ -0.92
UBR1-211ENST00000569971 C3orf67Q6ZVT6 689 aa9.3□□□□□ -0.92
UBR1-211ENST00000569971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.927e-7■■■■□ 24.8
UBR1-211ENST00000569971 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
UBR1-211ENST00000569971 CIZ1Q9ULV3 898 aaPredicted RBP9.28□□□□□ -0.92
UBR1-211ENST00000569971 CABP2Q9NPB3 220 aa9.21□□□□□ -0.94
UBR1-211ENST00000569971 G3V3G9 751 aa9.19□□□□□ -0.94
UBR1-211ENST00000569971 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
UBR1-211ENST00000569971 BOLA1Q9Y3E2 137 aa9.18□□□□□ -0.94
UBR1-211ENST00000569971 RIOK3O14730 519 aaKnown RBP9.12□□□□□ -0.95
UBR1-211ENST00000569971 EMP3P54852 163 aa9.12□□□□□ -0.95
UBR1-211ENST00000569971 DPY19L2Q6NUT2 758 aa9.12□□□□□ -0.95
UBR1-211ENST00000569971 SOX12O15370 315 aa9.11□□□□□ -0.95
UBR1-211ENST00000569971 VGFO15240 615 aaPredicted RBP9.1□□□□□ -0.95
UBR1-211ENST00000569971 MARVELD3Q96A59 401 aa9.1□□□□□ -0.95
UBR1-211ENST00000569971 EFCAB3Q8N7B9 438 aa9.09□□□□□ -0.95
UBR1-211ENST00000569971 TAOK2Q9UL54 1235 aa9.09□□□□□ -0.95
UBR1-211ENST00000569971 DOK7Q18PE1 504 aa9.08□□□□□ -0.96
UBR1-211ENST00000569971 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
UBR1-211ENST00000569971 SPNS2Q8IVW8 549 aa9.06□□□□□ -0.96
UBR1-211ENST00000569971 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
UBR1-211ENST00000569971 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
UBR1-211ENST00000569971 RIMBP2O15034 1052 aa9.04□□□□□ -0.96
UBR1-211ENST00000569971 HOXB1P14653 301 aaPredicted RBP9.04□□□□□ -0.96
UBR1-211ENST00000569971 MMRN1Q13201 1228 aa9.04□□□□□ -0.96
UBR1-211ENST00000569971 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
UBR1-211ENST00000569971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.03□□□□□ -0.96
UBR1-211ENST00000569971 MICALL2Q8IY33 904 aa9.03□□□□□ -0.96
UBR1-211ENST00000569971 ZNF710Q8N1W2 664 aa9.03□□□□□ -0.96
UBR1-211ENST00000569971 ZFP91Q96JP5 570 aaPredicted RBP9.03□□□□□ -0.96
UBR1-211ENST00000569971 FAM205CA6NFA0 338 aa9□□□□□ -0.97
UBR1-211ENST00000569971 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
UBR1-211ENST00000569971 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
UBR1-211ENST00000569971 MS4A4AQ96JQ5 239 aa8.98□□□□□ -0.97
UBR1-211ENST00000569971 NLRP6P59044 892 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms