RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
TNRC6A-218ENST00000569634 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
TNRC6A-218ENST00000569634 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
TNRC6A-218ENST00000569634 C7P10643 843 aa13.53□□□□□ -0.24
TNRC6A-218ENST00000569634 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
TNRC6A-218ENST00000569634 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
TNRC6A-218ENST00000569634 SGIP1Q9BQI5 828 aa13.5□□□□□ -0.25
TNRC6A-218ENST00000569634 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
TNRC6A-218ENST00000569634 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
TNRC6A-218ENST00000569634 FAM212AQ96EL1 285 aa13.47□□□□□ -0.25
TNRC6A-218ENST00000569634 TIE1P35590 1138 aa13.43□□□□□ -0.26
TNRC6A-218ENST00000569634 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
TNRC6A-218ENST00000569634 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
TNRC6A-218ENST00000569634 MAP3K13O43283 966 aa13.41□□□□□ -0.26
TNRC6A-218ENST00000569634 NUBP1P53384 320 aa13.4□□□□□ -0.26
TNRC6A-218ENST00000569634 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
TNRC6A-218ENST00000569634 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
TNRC6A-218ENST00000569634 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
TNRC6A-218ENST00000569634 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
TNRC6A-218ENST00000569634 BMP2KQ9NSY1 1161 aaPredicted RBP13.33□□□□□ -0.28
TNRC6A-218ENST00000569634 POTEB2H3BUK9 544 aa13.29□□□□□ -0.28
TNRC6A-218ENST00000569634 DCAF8Q5TAQ9 597 aa13.29□□□□□ -0.28
TNRC6A-218ENST00000569634 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
TNRC6A-218ENST00000569634 IER5LQ5T953 404 aa13.28□□□□□ -0.28
TNRC6A-218ENST00000569634 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
TNRC6A-218ENST00000569634 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
TNRC6A-218ENST00000569634 SEC24BO95487 1268 aa13.26□□□□□ -0.29
TNRC6A-218ENST00000569634 GSE1Q14687 1217 aa13.25□□□□□ -0.29
TNRC6A-218ENST00000569634 VASPP50552 380 aaPredicted RBP13.24□□□□□ -0.29
TNRC6A-218ENST00000569634 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
TNRC6A-218ENST00000569634 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
TNRC6A-218ENST00000569634 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
TNRC6A-218ENST00000569634 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
TNRC6A-218ENST00000569634 PYGBP11216 843 aa13.12□□□□□ -0.31
TNRC6A-218ENST00000569634 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
TNRC6A-218ENST00000569634 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
TNRC6A-218ENST00000569634 PLCG2P16885 1265 aa13.09□□□□□ -0.31
TNRC6A-218ENST00000569634 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
TNRC6A-218ENST00000569634 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
TNRC6A-218ENST00000569634 POTEFA5A3E0 1075 aa13.07□□□□□ -0.32
TNRC6A-218ENST00000569634 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
TNRC6A-218ENST00000569634 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
TNRC6A-218ENST00000569634 POTEMA6NI47 508 aa13.02□□□□□ -0.33
TNRC6A-218ENST00000569634 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
TNRC6A-218ENST00000569634 OCEL1Q9H607 264 aa13.02□□□□□ -0.33
TNRC6A-218ENST00000569634 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
TNRC6A-218ENST00000569634 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
TNRC6A-218ENST00000569634 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
TNRC6A-218ENST00000569634 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
TNRC6A-218ENST00000569634 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
TNRC6A-218ENST00000569634 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
TNRC6A-218ENST00000569634 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
TNRC6A-218ENST00000569634 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
TNRC6A-218ENST00000569634 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
TNRC6A-218ENST00000569634 PSEN1P49768 467 aa12.89□□□□□ -0.35
TNRC6A-218ENST00000569634 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
TNRC6A-218ENST00000569634 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
TNRC6A-218ENST00000569634 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
TNRC6A-218ENST00000569634 SNPHO15079 494 aa12.88□□□□□ -0.35
TNRC6A-218ENST00000569634 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.88□□□□□ -0.35
TNRC6A-218ENST00000569634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
TNRC6A-218ENST00000569634 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
TNRC6A-218ENST00000569634 G3V3G9 751 aa12.77□□□□□ -0.37
TNRC6A-218ENST00000569634 TMEM121BQ9BXQ6 578 aaPredicted RBP12.76□□□□□ -0.37
TNRC6A-218ENST00000569634 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
TNRC6A-218ENST00000569634 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
TNRC6A-218ENST00000569634 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
TNRC6A-218ENST00000569634 ST18O60284 1047 aa12.69□□□□□ -0.38
TNRC6A-218ENST00000569634 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
TNRC6A-218ENST00000569634 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
TNRC6A-218ENST00000569634 CDAN1Q8IWY9 1227 aa12.62□□□□□ -0.39
TNRC6A-218ENST00000569634 BOLA1Q9Y3E2 137 aa12.62□□□□□ -0.39
TNRC6A-218ENST00000569634 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
TNRC6A-218ENST00000569634 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
TNRC6A-218ENST00000569634 SOX12O15370 315 aa12.58□□□□□ -0.4
TNRC6A-218ENST00000569634 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
TNRC6A-218ENST00000569634 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
TNRC6A-218ENST00000569634 RIMBP2O15034 1052 aa12.47□□□□□ -0.41
TNRC6A-218ENST00000569634 EMP3P54852 163 aa12.47□□□□□ -0.41
TNRC6A-218ENST00000569634 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
TNRC6A-218ENST00000569634 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-218ENST00000569634 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-218ENST00000569634 ZNF710Q8N1W2 664 aa12.45□□□□□ -0.42
TNRC6A-218ENST00000569634 MARVELD3Q96A59 401 aa12.42□□□□□ -0.42
TNRC6A-218ENST00000569634 NLRP6P59044 892 aa12.41□□□□□ -0.42
TNRC6A-218ENST00000569634 RNF25Q96BH1 459 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-218ENST00000569634 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
TNRC6A-218ENST00000569634 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
TNRC6A-218ENST00000569634 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
TNRC6A-218ENST00000569634 HOXB1P14653 301 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-218ENST00000569634 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
TNRC6A-218ENST00000569634 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
TNRC6A-218ENST00000569634 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
TNRC6A-218ENST00000569634 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
TNRC6A-218ENST00000569634 PHF8Q9UPP1 1060 aa12.33□□□□□ -0.44
TNRC6A-218ENST00000569634 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
TNRC6A-218ENST00000569634 STK25O00506 426 aa12.3□□□□□ -0.44
TNRC6A-218ENST00000569634 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
TNRC6A-218ENST00000569634 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
TNRC6A-218ENST00000569634 ERBB3P21860 1342 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms