RNA–Protein interactions for RNA: ENST00000569341.1

CFDP1-208, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-208ENST00000569341 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
CFDP1-208ENST00000569341 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
CFDP1-208ENST00000569341 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
CFDP1-208ENST00000569341 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
CFDP1-208ENST00000569341 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
CFDP1-208ENST00000569341 METRNQ9UJH8 293 aa12.06□□□□□ -0.48
CFDP1-208ENST00000569341 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
CFDP1-208ENST00000569341 MAP3K13O43283 966 aa12.04□□□□□ -0.48
CFDP1-208ENST00000569341 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
CFDP1-208ENST00000569341 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
CFDP1-208ENST00000569341 FKBP8Q14318 412 aa12.04□□□□□ -0.48
CFDP1-208ENST00000569341 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
CFDP1-208ENST00000569341 SLC39A7Q92504 469 aa12.03□□□□□ -0.48
CFDP1-208ENST00000569341 C7P10643 843 aa12.02□□□□□ -0.49
CFDP1-208ENST00000569341 BMP2KQ9NSY1 1161 aaPredicted RBP12.01□□□□□ -0.49
CFDP1-208ENST00000569341 NUBP1P53384 320 aa12□□□□□ -0.49
CFDP1-208ENST00000569341 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
CFDP1-208ENST00000569341 TIE1P35590 1138 aa11.94□□□□□ -0.5
CFDP1-208ENST00000569341 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
CFDP1-208ENST00000569341 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
CFDP1-208ENST00000569341 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
CFDP1-208ENST00000569341 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
CFDP1-208ENST00000569341 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
CFDP1-208ENST00000569341 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
CFDP1-208ENST00000569341 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
CFDP1-208ENST00000569341 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
CFDP1-208ENST00000569341 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
CFDP1-208ENST00000569341 POTEMA6NI47 508 aa11.8□□□□□ -0.52
CFDP1-208ENST00000569341 LCE2DQ5TA82 110 aaPredicted RBP11.78□□□□□ -0.52
CFDP1-208ENST00000569341 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
CFDP1-208ENST00000569341 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
CFDP1-208ENST00000569341 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
CFDP1-208ENST00000569341 IER5LQ5T953 404 aa11.75□□□□□ -0.53
CFDP1-208ENST00000569341 SEC24BO95487 1268 aa11.74□□□□□ -0.53
CFDP1-208ENST00000569341 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
CFDP1-208ENST00000569341 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
CFDP1-208ENST00000569341 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
CFDP1-208ENST00000569341 PYGBP11216 843 aa11.71□□□□□ -0.53
CFDP1-208ENST00000569341 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
CFDP1-208ENST00000569341 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
CFDP1-208ENST00000569341 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
CFDP1-208ENST00000569341 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
CFDP1-208ENST00000569341 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
CFDP1-208ENST00000569341 PLCG2P16885 1265 aa11.6□□□□□ -0.55
CFDP1-208ENST00000569341 PCDH10Q9P2E7 1040 aa11.58□□□□□ -0.56
CFDP1-208ENST00000569341 GSE1Q14687 1217 aa11.57□□□□□ -0.56
CFDP1-208ENST00000569341 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
CFDP1-208ENST00000569341 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
CFDP1-208ENST00000569341 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
CFDP1-208ENST00000569341 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
CFDP1-208ENST00000569341 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
CFDP1-208ENST00000569341 ST18O60284 1047 aa11.47□□□□□ -0.57
CFDP1-208ENST00000569341 PDCD7Q8N8D1 485 aaKnown RBP11.47□□□□□ -0.57
CFDP1-208ENST00000569341 PSEN1P49768 467 aa11.44□□□□□ -0.58
CFDP1-208ENST00000569341 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
CFDP1-208ENST00000569341 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
CFDP1-208ENST00000569341 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
CFDP1-208ENST00000569341 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
CFDP1-208ENST00000569341 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
CFDP1-208ENST00000569341 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
CFDP1-208ENST00000569341 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
CFDP1-208ENST00000569341 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
CFDP1-208ENST00000569341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.593e-6■■■□□ 15.8
CFDP1-208ENST00000569341 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
CFDP1-208ENST00000569341 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
CFDP1-208ENST00000569341 SNPHO15079 494 aa11.3□□□□□ -0.6
CFDP1-208ENST00000569341 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
CFDP1-208ENST00000569341 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
CFDP1-208ENST00000569341 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
CFDP1-208ENST00000569341 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
CFDP1-208ENST00000569341 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
CFDP1-208ENST00000569341 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
CFDP1-208ENST00000569341 EFCAB3Q8N7B9 438 aa11.18□□□□□ -0.62
CFDP1-208ENST00000569341 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
CFDP1-208ENST00000569341 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
CFDP1-208ENST00000569341 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
CFDP1-208ENST00000569341 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
CFDP1-208ENST00000569341 SPNS2Q8IVW8 549 aa11.14□□□□□ -0.63
CFDP1-208ENST00000569341 EMP3P54852 163 aa11.13□□□□□ -0.63
CFDP1-208ENST00000569341 G3V3G9 751 aa11.1□□□□□ -0.63
CFDP1-208ENST00000569341 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
CFDP1-208ENST00000569341 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
CFDP1-208ENST00000569341 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
CFDP1-208ENST00000569341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.08□□□□□ -0.64
CFDP1-208ENST00000569341 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
CFDP1-208ENST00000569341 ZFP91Q96JP5 570 aaPredicted RBP11.08□□□□□ -0.64
CFDP1-208ENST00000569341 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
CFDP1-208ENST00000569341 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
CFDP1-208ENST00000569341 KRTAP3-2Q9BYR7 98 aa11.07□□□□□ -0.64
CFDP1-208ENST00000569341 TMEM92Q6UXU6 159 aa11.06□□□□□ -0.64
CFDP1-208ENST00000569341 SOX12O15370 315 aa11.04□□□□□ -0.64
CFDP1-208ENST00000569341 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
CFDP1-208ENST00000569341 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
CFDP1-208ENST00000569341 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
CFDP1-208ENST00000569341 PHF8Q9UPP1 1060 aa11.02□□□□□ -0.65
CFDP1-208ENST00000569341 DOK7Q18PE1 504 aa10.98□□□□□ -0.65
CFDP1-208ENST00000569341 ZNF710Q8N1W2 664 aa10.98□□□□□ -0.65
CFDP1-208ENST00000569341 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
CFDP1-208ENST00000569341 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
CFDP1-208ENST00000569341 ERBB3P21860 1342 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms