RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 GALR2O43603 387 aaPredicted RBP9.81□□□□□ -0.84
BBS4-215ENST00000569001 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
BBS4-215ENST00000569001 MS4A3Q96HJ5 214 aa9.77□□□□□ -0.85
BBS4-215ENST00000569001 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
BBS4-215ENST00000569001 FAM212AQ96EL1 285 aa9.75□□□□□ -0.85
BBS4-215ENST00000569001 POTEIP0CG38 1075 aa9.74□□□□□ -0.85
BBS4-215ENST00000569001 KIF12Q96FN5 646 aa9.74□□□□□ -0.85
BBS4-215ENST00000569001 MAP3K13O43283 966 aa9.73□□□□□ -0.85
BBS4-215ENST00000569001 SPOCK2Q92563 424 aa9.73□□□□□ -0.85
BBS4-215ENST00000569001 PYGBP11216 843 aa9.71□□□□□ -0.86
BBS4-215ENST00000569001 TRPC6Q9Y210 931 aa9.71□□□□□ -0.86
BBS4-215ENST00000569001 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
BBS4-215ENST00000569001 CIZ1Q9ULV3 898 aaPredicted RBP9.68□□□□□ -0.86
BBS4-215ENST00000569001 CLCN6P51797 869 aa9.65□□□□□ -0.86
BBS4-215ENST00000569001 PCDHB13Q9Y5F0 798 aa9.65□□□□□ -0.86
BBS4-215ENST00000569001 IFNL1Q8IU54 200 aa9.63□□□□□ -0.87
BBS4-215ENST00000569001 GSE1Q14687 1217 aa9.62□□□□□ -0.87
BBS4-215ENST00000569001 PELP1Q8IZL8 1130 aaKnown RBP9.62□□□□□ -0.87
BBS4-215ENST00000569001 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
BBS4-215ENST00000569001 BMP2KQ9NSY1 1161 aaPredicted RBP9.59□□□□□ -0.87
BBS4-215ENST00000569001 ATMINO43313 823 aaPredicted RBP9.58□□□□□ -0.88
BBS4-215ENST00000569001 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
BBS4-215ENST00000569001 ASTLQ6HA08 431 aaPredicted RBP9.55□□□□□ -0.88
BBS4-215ENST00000569001 TTLL13PA6NNM8 815 aa9.53□□□□□ -0.88
BBS4-215ENST00000569001 SGIP1Q9BQI5 828 aa9.53□□□□□ -0.88
BBS4-215ENST00000569001 TIE1P35590 1138 aa9.51□□□□□ -0.89
BBS4-215ENST00000569001 TMEM106CQ9BVX2 250 aa9.51□□□□□ -0.89
BBS4-215ENST00000569001 CHRM1P11229 460 aaPredicted RBP9.5□□□□□ -0.89
BBS4-215ENST00000569001 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
BBS4-215ENST00000569001 METRNQ9UJH8 293 aa9.47□□□□□ -0.89
BBS4-215ENST00000569001 POTEB2H3BUK9 544 aa9.46□□□□□ -0.9
BBS4-215ENST00000569001 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
BBS4-215ENST00000569001 LHX8Q68G74 356 aa9.45□□□□□ -0.9
BBS4-215ENST00000569001 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
BBS4-215ENST00000569001 PSEN1P49768 467 aa9.44□□□□□ -0.9
BBS4-215ENST00000569001 PKD2Q13563 968 aa9.44□□□□□ -0.9
BBS4-215ENST00000569001 SLC39A7Q92504 469 aa9.43□□□□□ -0.9
BBS4-215ENST00000569001 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
BBS4-215ENST00000569001 ECM2O94769 699 aaPredicted RBP9.41□□□□□ -0.9
BBS4-215ENST00000569001 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
BBS4-215ENST00000569001 C7P10643 843 aa9.4□□□□□ -0.9
BBS4-215ENST00000569001 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
BBS4-215ENST00000569001 PDAP1Q13442 181 aaKnown RBP9.39□□□□□ -0.91
BBS4-215ENST00000569001 POTEJP0CG39 1038 aa9.38□□□□□ -0.91
BBS4-215ENST00000569001 RIOK3O14730 519 aaKnown RBP9.37□□□□□ -0.91
BBS4-215ENST00000569001 RGL2O15211 777 aa9.37□□□□□ -0.91
BBS4-215ENST00000569001 SEC24BO95487 1268 aa9.35□□□□□ -0.91
BBS4-215ENST00000569001 CABP2Q9NPB3 220 aa9.35□□□□□ -0.91
BBS4-215ENST00000569001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
BBS4-215ENST00000569001 ZFP91Q96JP5 570 aaPredicted RBP9.34□□□□□ -0.91
BBS4-215ENST00000569001 IRX5P78411 483 aaPredicted RBP9.31□□□□□ -0.92
BBS4-215ENST00000569001 GOLGA2Q08379 1002 aa9.31□□□□□ -0.92
BBS4-215ENST00000569001 IER5LQ5T953 404 aa9.31□□□□□ -0.92
BBS4-215ENST00000569001 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
BBS4-215ENST00000569001 VGFO15240 615 aaPredicted RBP9.29□□□□□ -0.92
BBS4-215ENST00000569001 PLCG2P16885 1265 aa9.29□□□□□ -0.92
BBS4-215ENST00000569001 MKRN3Q13064 507 aaKnown RBP9.29□□□□□ -0.92
BBS4-215ENST00000569001 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
BBS4-215ENST00000569001 PDCD7Q8N8D1 485 aaKnown RBP9.26□□□□□ -0.93
BBS4-215ENST00000569001 BCL11BQ9C0K0 894 aaPredicted RBP9.26□□□□□ -0.93
BBS4-215ENST00000569001 OCEL1Q9H607 264 aa9.26□□□□□ -0.93
BBS4-215ENST00000569001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.26□□□□□ -0.93
BBS4-215ENST00000569001 STK25O00506 426 aa9.24□□□□□ -0.93
BBS4-215ENST00000569001 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
BBS4-215ENST00000569001 STK24Q9Y6E0 443 aa9.24□□□□□ -0.93
BBS4-215ENST00000569001 PHF8Q9UPP1 1060 aa9.19□□□□□ -0.94
BBS4-215ENST00000569001 SCUBE2Q9NQ36 999 aa9.18□□□□□ -0.94
BBS4-215ENST00000569001 ILDR1Q86SU0 546 aaPredicted RBP9.17□□□□□ -0.94
BBS4-215ENST00000569001 MS4A4AQ96JQ5 239 aa9.16□□□□□ -0.94
BBS4-215ENST00000569001 MAMSTRQ6ZN01 415 aa9.15□□□□□ -0.94
BBS4-215ENST00000569001 TAOK2Q9UL54 1235 aa9.15□□□□□ -0.94
BBS4-215ENST00000569001 DCAF8L2P0C7V8 631 aa9.14□□□□□ -0.95
BBS4-215ENST00000569001 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
BBS4-215ENST00000569001 RTN4Q9NQC3 1192 aaKnown RBP9.14□□□□□ -0.95
BBS4-215ENST00000569001 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
BBS4-215ENST00000569001 SOX12O15370 315 aa9.11□□□□□ -0.95
BBS4-215ENST00000569001 SLAIN1Q8ND83 568 aa9.11□□□□□ -0.95
BBS4-215ENST00000569001 FBXO22Q8NEZ5 403 aa9.1□□□□□ -0.95
BBS4-215ENST00000569001 HS6ST3Q8IZP7 471 aa9.09□□□□□ -0.95
BBS4-215ENST00000569001 BOLA1Q9Y3E2 137 aa9.09□□□□□ -0.95
BBS4-215ENST00000569001 C3orf67Q6ZVT6 689 aa9.08□□□□□ -0.96
BBS4-215ENST00000569001 L3MBTL3Q96JM7 780 aaPredicted RBP9.08□□□□□ -0.96
BBS4-215ENST00000569001 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.07□□□□□ -0.96
BBS4-215ENST00000569001 NLRP6P59044 892 aa9.06□□□□□ -0.96
BBS4-215ENST00000569001 NKX1-1Q15270 411 aaPredicted RBP9.05□□□□□ -0.96
BBS4-215ENST00000569001 G3V3G9 751 aa9.04□□□□□ -0.96
BBS4-215ENST00000569001 PPP1R37O75864 691 aa9.04□□□□□ -0.96
BBS4-215ENST00000569001 AMER1Q5JTC6 1135 aaPredicted RBP9.04□□□□□ -0.96
BBS4-215ENST00000569001 MICALL2Q8IY33 904 aa9.04□□□□□ -0.96
BBS4-215ENST00000569001 FAM163AQ96GL9 167 aaPredicted RBP9.03□□□□□ -0.96
BBS4-215ENST00000569001 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
BBS4-215ENST00000569001 TMEM121BQ9BXQ6 578 aaPredicted RBP9.01□□□□□ -0.97
BBS4-215ENST00000569001 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
BBS4-215ENST00000569001 ST18O60284 1047 aa8.92□□□□□ -0.98
BBS4-215ENST00000569001 DNAJC5Q9H3Z4 198 aa8.92□□□□□ -0.98
BBS4-215ENST00000569001 POTEMA6NI47 508 aa8.9□□□□□ -0.98
BBS4-215ENST00000569001 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.98
BBS4-215ENST00000569001 POTEGQ6S5H5 508 aa8.89□□□□□ -0.99
BBS4-215ENST00000569001 HOXB3P14651 431 aaPredicted RBP8.88□□□□□ -0.99
BBS4-215ENST00000569001 C2orf72A6NCS6 295 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms