RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
CYLD-213ENST00000568744 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
CYLD-213ENST00000568744 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
CYLD-213ENST00000568744 PYGBP11216 843 aa14.48□□□□□ -0.09
CYLD-213ENST00000568744 CHGAP10645 457 aaKnown RBP14.44□□□□□ -0.1
CYLD-213ENST00000568744 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
CYLD-213ENST00000568744 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
CYLD-213ENST00000568744 RIOK3O14730 519 aaKnown RBP14.41□□□□□ -0.1
CYLD-213ENST00000568744 CHRM1P11229 460 aaPredicted RBP14.4□□□□□ -0.1
CYLD-213ENST00000568744 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
CYLD-213ENST00000568744 PLCB2Q00722 1185 aa14.38□□□□□ -0.11
CYLD-213ENST00000568744 TAOK2Q9UL54 1235 aa14.38□□□□□ -0.11
CYLD-213ENST00000568744 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
CYLD-213ENST00000568744 VGFO15240 615 aaPredicted RBP14.31□□□□□ -0.12
CYLD-213ENST00000568744 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
CYLD-213ENST00000568744 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
CYLD-213ENST00000568744 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
CYLD-213ENST00000568744 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
CYLD-213ENST00000568744 CFAP44Q96MT7 982 aa14.29□□□□□ -0.12
CYLD-213ENST00000568744 ZRANB1Q9UGI0 708 aa14.29□□□□□ -0.12
CYLD-213ENST00000568744 STK25O00506 426 aa14.28□□□□□ -0.12
CYLD-213ENST00000568744 HAP1P54257 671 aaPredicted RBP14.28□□□□□ -0.12
CYLD-213ENST00000568744 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
CYLD-213ENST00000568744 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
CYLD-213ENST00000568744 PCDHB8Q9UN66 801 aa14.24□□□□□ -0.13
CYLD-213ENST00000568744 PCDHB13Q9Y5F0 798 aa14.24□□□□□ -0.13
CYLD-213ENST00000568744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
CYLD-213ENST00000568744 ZFP91Q96JP5 570 aaPredicted RBP14.23□□□□□ -0.13
CYLD-213ENST00000568744 STK24Q9Y6E0 443 aa14.22□□□□□ -0.13
CYLD-213ENST00000568744 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
CYLD-213ENST00000568744 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
CYLD-213ENST00000568744 MAP3K13O43283 966 aa14.18□□□□□ -0.14
CYLD-213ENST00000568744 PHF12Q96QT6 1004 aa14.18□□□□□ -0.14
CYLD-213ENST00000568744 PDAP1Q13442 181 aaKnown RBP14.16□□□□□ -0.14
CYLD-213ENST00000568744 KIF12Q96FN5 646 aa14.16□□□□□ -0.14
CYLD-213ENST00000568744 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
CYLD-213ENST00000568744 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
CYLD-213ENST00000568744 C19orf67A6NJJ6 358 aa14.13□□□□□ -0.15
CYLD-213ENST00000568744 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
CYLD-213ENST00000568744 PSEN1P49768 467 aa14.11□□□□□ -0.15
CYLD-213ENST00000568744 HAX1O00165 279 aa14.1□□□□□ -0.15
CYLD-213ENST00000568744 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
CYLD-213ENST00000568744 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
CYLD-213ENST00000568744 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
CYLD-213ENST00000568744 TSHZ2Q9NRE2 1034 aa14□□□□□ -0.17
CYLD-213ENST00000568744 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
CYLD-213ENST00000568744 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
CYLD-213ENST00000568744 VSIG10Q8N0Z9 540 aa13.95□□□□□ -0.18
CYLD-213ENST00000568744 RYDENQ9NUL5 291 aaKnown RBP13.95□□□□□ -0.18
CYLD-213ENST00000568744 EVX2Q03828 476 aa13.93□□□□□ -0.18
CYLD-213ENST00000568744 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
CYLD-213ENST00000568744 TRPC6Q9Y210 931 aa13.91□□□□□ -0.18
CYLD-213ENST00000568744 GOLGA2Q08379 1002 aa13.9□□□□□ -0.18
CYLD-213ENST00000568744 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
CYLD-213ENST00000568744 GALR2O43603 387 aaPredicted RBP13.85□□□□□ -0.19
CYLD-213ENST00000568744 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
CYLD-213ENST00000568744 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
CYLD-213ENST00000568744 SOX12O15370 315 aa13.81□□□□□ -0.2
CYLD-213ENST00000568744 TIE1P35590 1138 aa13.81□□□□□ -0.2
CYLD-213ENST00000568744 NLRP6P59044 892 aa13.81□□□□□ -0.2
CYLD-213ENST00000568744 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
CYLD-213ENST00000568744 MKRN3Q13064 507 aaKnown RBP13.79□□□□□ -0.2
CYLD-213ENST00000568744 TTLL13PA6NNM8 815 aa13.78□□□□□ -0.2
CYLD-213ENST00000568744 CLCN6P51797 869 aa13.78□□□□□ -0.2
CYLD-213ENST00000568744 BMP2KQ9NSY1 1161 aaPredicted RBP13.77□□□□□ -0.21
CYLD-213ENST00000568744 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
CYLD-213ENST00000568744 TRIM35Q9UPQ4 493 aa13.72□□□□□ -0.21
CYLD-213ENST00000568744 PPP1R37O75864 691 aa13.7□□□□□ -0.22
CYLD-213ENST00000568744 GABBR2O75899 941 aa13.69□□□□□ -0.22
CYLD-213ENST00000568744 ATN1P54259 1190 aaPredicted RBP13.66□□□□□ -0.22
CYLD-213ENST00000568744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.22
CYLD-213ENST00000568744 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
CYLD-213ENST00000568744 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
CYLD-213ENST00000568744 CADPS2Q86UW7 1296 aa13.63□□□□□ -0.23
CYLD-213ENST00000568744 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
CYLD-213ENST00000568744 BCANQ96GW7 911 aa13.61□□□□□ -0.23
CYLD-213ENST00000568744 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
CYLD-213ENST00000568744 WDR70Q9NW82 654 aa13.58□□□□□ -0.24
CYLD-213ENST00000568744 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
CYLD-213ENST00000568744 IER5LQ5T953 404 aa13.5□□□□□ -0.25
CYLD-213ENST00000568744 PLCG2P16885 1265 aa13.49□□□□□ -0.25
CYLD-213ENST00000568744 NBR1Q14596 966 aa13.48□□□□□ -0.25
CYLD-213ENST00000568744 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
CYLD-213ENST00000568744 OCEL1Q9H607 264 aa13.48□□□□□ -0.25
CYLD-213ENST00000568744 SEC24BO95487 1268 aa13.47□□□□□ -0.25
CYLD-213ENST00000568744 IRX5P78411 483 aaPredicted RBP13.47□□□□□ -0.25
CYLD-213ENST00000568744 PELP1Q8IZL8 1130 aaKnown RBP13.47□□□□□ -0.25
CYLD-213ENST00000568744 G3V3G9 751 aa13.46□□□□□ -0.25
CYLD-213ENST00000568744 PDCD7Q8N8D1 485 aaKnown RBP13.46□□□□□ -0.25
CYLD-213ENST00000568744 PDE4AP27815 886 aa13.44□□□□□ -0.26
CYLD-213ENST00000568744 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
CYLD-213ENST00000568744 P3H3Q8IVL6 736 aa13.41□□□□□ -0.26
CYLD-213ENST00000568744 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
CYLD-213ENST00000568744 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
CYLD-213ENST00000568744 MICALL2Q8IY33 904 aa13.4□□□□□ -0.26
CYLD-213ENST00000568744 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
CYLD-213ENST00000568744 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
CYLD-213ENST00000568744 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
CYLD-213ENST00000568744 C7P10643 843 aa13.36□□□□□ -0.27
CYLD-213ENST00000568744 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms