RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.29	□□□□□ -0.28
CBFB-208	ENST00000567947	GALR2	O43603	387 aa	Predicted RBP	13.28	□□□□□ -0.28
CBFB-208	ENST00000567947	FAM212A	Q96EL1	285 aa		13.28	□□□□□ -0.28
CBFB-208	ENST00000567947	KLHL34	Q8N239	644 aa		13.26	□□□□□ -0.29
CBFB-208	ENST00000567947	KIF12	Q96FN5	646 aa		13.25	□□□□□ -0.29
CBFB-208	ENST00000567947	POTEI	P0CG38	1075 aa		13.23	□□□□□ -0.29
CBFB-208	ENST00000567947	MS4A3	Q96HJ5	214 aa		13.22	□□□□□ -0.29
CBFB-208	ENST00000567947	SPOCK2	Q92563	424 aa		13.19	□□□□□ -0.3
CBFB-208	ENST00000567947	DCBLD2	Q96PD2	775 aa		13.18	□□□□□ -0.3
CBFB-208	ENST00000567947	SGIP1	Q9BQI5	828 aa		13.18	□□□□□ -0.3
CBFB-208	ENST00000567947	MAP3K13	O43283	966 aa		13.17	□□□□□ -0.3
CBFB-208	ENST00000567947	GSE1	Q14687	1217 aa		13.15	□□□□□ -0.3
CBFB-208	ENST00000567947	DCAF8	Q5TAQ9	597 aa		13.15	□□□□□ -0.3
CBFB-208	ENST00000567947	ASTL	Q6HA08	431 aa	Predicted RBP	13.1	□□□□□ -0.31
CBFB-208	ENST00000567947	PCDHB13	Q9Y5F0	798 aa		13.08	□□□□□ -0.32
CBFB-208	ENST00000567947	CHRM1	P11229	460 aa	Predicted RBP	13.06	□□□□□ -0.32
CBFB-208	ENST00000567947	ATMIN	O43313	823 aa	Predicted RBP	13.05	□□□□□ -0.32
CBFB-208	ENST00000567947	TIE1	P35590	1138 aa		13.05	□□□□□ -0.32
CBFB-208	ENST00000567947	PYGB	P11216	843 aa		13.04	□□□□□ -0.32
CBFB-208	ENST00000567947	IFNL1	Q8IU54	200 aa		13.04	□□□□□ -0.32
CBFB-208	ENST00000567947	TRPC6	Q9Y210	931 aa		13.04	□□□□□ -0.32
CBFB-208	ENST00000567947	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.02	□□□□□ -0.33
CBFB-208	ENST00000567947	PELP1	Q8IZL8	1130 aa	Known RBP	13	□□□□□ -0.33
CBFB-208	ENST00000567947	ATN1	P54259	1190 aa	Predicted RBP	12.97	□□□□□ -0.33
CBFB-208	ENST00000567947	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.97	□□□□□ -0.33
CBFB-208	ENST00000567947	TTLL13P	A6NNM8	815 aa		12.96	□□□□□ -0.33
CBFB-208	ENST00000567947	TRIM41	Q8WV44	630 aa		12.96	□□□□□ -0.33
CBFB-208	ENST00000567947	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.94	□□□□□ -0.34
CBFB-208	ENST00000567947	SLC39A7	Q92504	469 aa		12.93	□□□□□ -0.34
CBFB-208	ENST00000567947	LHX8	Q68G74	356 aa		12.91	□□□□□ -0.34
CBFB-208	ENST00000567947	PCDHB8	Q9UN66	801 aa		12.91	□□□□□ -0.34
CBFB-208	ENST00000567947	C7	P10643	843 aa		12.9	□□□□□ -0.34
CBFB-208	ENST00000567947	METRN	Q9UJH8	293 aa		12.88	□□□□□ -0.35
CBFB-208	ENST00000567947	TMEM106C	Q9BVX2	250 aa		12.87	□□□□□ -0.35
CBFB-208	ENST00000567947	TRIM35	Q9UPQ4	493 aa		12.85	□□□□□ -0.35
CBFB-208	ENST00000567947	IER5L	Q5T953	404 aa		12.84	□□□□□ -0.35
CBFB-208	ENST00000567947	POTEF	A5A3E0	1075 aa		12.79	□□□□□ -0.36
CBFB-208	ENST00000567947	POTEB2	H3BUK9	544 aa		12.79	□□□□□ -0.36
CBFB-208	ENST00000567947	PDAP1	Q13442	181 aa	Known RBP	12.79	□□□□□ -0.36
CBFB-208	ENST00000567947	PSEN1	P49768	467 aa		12.78	□□□□□ -0.36
CBFB-208	ENST00000567947	RNF25	Q96BH1	459 aa	Predicted RBP	12.75	□□□□□ -0.37
CBFB-208	ENST00000567947	RIOK3	O14730	519 aa	Known RBP	12.72	□□□□□ -0.37
CBFB-208	ENST00000567947	PKD2	Q13563	968 aa		12.72	□□□□□ -0.37
CBFB-208	ENST00000567947	COLQ	Q9Y215	455 aa	Predicted RBP	12.72	□□□□□ -0.37
CBFB-208	ENST00000567947	IRX5	P78411	483 aa	Predicted RBP	12.71	□□□□□ -0.37
CBFB-208	ENST00000567947	POTEJ	P0CG39	1038 aa		12.68	□□□□□ -0.38
CBFB-208	ENST00000567947	SEC24B	O95487	1268 aa		12.67	□□□□□ -0.38
CBFB-208	ENST00000567947	VGF	O15240	615 aa	Predicted RBP	12.66	□□□□□ -0.38
CBFB-208	ENST00000567947	OTUD5	Q96G74	571 aa		12.66	□□□□□ -0.38
CBFB-208	ENST00000567947	ECM2	O94769	699 aa	Predicted RBP	12.65	□□□□□ -0.38
CBFB-208	ENST00000567947	PLCG2	P16885	1265 aa		12.63	□□□□□ -0.39
CBFB-208	ENST00000567947	MAMSTR	Q6ZN01	415 aa		12.63	□□□□□ -0.39
CBFB-208	ENST00000567947	ILDR1	Q86SU0	546 aa	Predicted RBP	12.63	□□□□□ -0.39
CBFB-208	ENST00000567947	OCEL1	Q9H607	264 aa		12.63	□□□□□ -0.39
CBFB-208	ENST00000567947	GOLGA2	Q08379	1002 aa		12.62	□□□□□ -0.39
CBFB-208	ENST00000567947	MKRN3	Q13064	507 aa	Known RBP	12.61	□□□□□ -0.39
CBFB-208	ENST00000567947	CABP2	Q9NPB3	220 aa		12.6	□□□□□ -0.39
CBFB-208	ENST00000567947	TAOK2	Q9UL54	1235 aa		12.6	□□□□□ -0.39
CBFB-208	ENST00000567947	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.59	□□□□□ -0.39
CBFB-208	ENST00000567947	PDCD7	Q8N8D1	485 aa	Known RBP	12.59	□□□□□ -0.39
CBFB-208	ENST00000567947	ZFP91	Q96JP5	570 aa	Predicted RBP	12.59	□□□□□ -0.39
CBFB-208	ENST00000567947	RGL2	O15211	777 aa		12.57	□□□□□ -0.4
CBFB-208	ENST00000567947	SCUBE2	Q9NQ36	999 aa		12.55	□□□□□ -0.4
CBFB-208	ENST00000567947	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
CBFB-208	ENST00000567947	EFCAB3	Q8N7B9	438 aa		12.5	□□□□□ -0.41
CBFB-208	ENST00000567947	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.48	□□□□□ -0.41
CBFB-208	ENST00000567947	SOX12	O15370	315 aa		12.46	□□□□□ -0.41
CBFB-208	ENST00000567947	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.45	□□□□□ -0.42
CBFB-208	ENST00000567947	STK25	O00506	426 aa		12.44	□□□□□ -0.42
CBFB-208	ENST00000567947	STK24	Q9Y6E0	443 aa		12.42	□□□□□ -0.42
CBFB-208	ENST00000567947	DPY19L2	Q6NUT2	758 aa		12.4	□□□□□ -0.42
CBFB-208	ENST00000567947	MS4A4A	Q96JQ5	239 aa		12.38	□□□□□ -0.43
CBFB-208	ENST00000567947	PHF8	Q9UPP1	1060 aa		12.37	□□□□□ -0.43
CBFB-208	ENST00000567947	HS6ST3	Q8IZP7	471 aa		12.36	□□□□□ -0.43
CBFB-208	ENST00000567947	FBXO22	Q8NEZ5	403 aa		12.36	□□□□□ -0.43
CBFB-208	ENST00000567947	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.36	□□□□□ -0.43
CBFB-208	ENST00000567947	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.36	□□□□□ -0.43
CBFB-208	ENST00000567947	BOLA1	Q9Y3E2	137 aa		12.36	□□□□□ -0.43
CBFB-208	ENST00000567947	SLAIN1	Q8ND83	568 aa		12.35	□□□□□ -0.43
CBFB-208	ENST00000567947	NLRP6	P59044	892 aa		12.34	□□□□□ -0.43
CBFB-208	ENST00000567947	C3orf67	Q6ZVT6	689 aa		12.34	□□□□□ -0.43
CBFB-208	ENST00000567947	MFRP	Q9BY79	579 aa		12.34	□□□□□ -0.43
CBFB-208	ENST00000567947	DNAJC5	Q9H3Z4	198 aa		12.31	□□□□□ -0.44
CBFB-208	ENST00000567947		G3V3G9	751 aa		12.29	□□□□□ -0.44
CBFB-208	ENST00000567947	MICALL2	Q8IY33	904 aa		12.27	□□□□□ -0.45
CBFB-208	ENST00000567947	LCE2D	Q5TA82	110 aa	Predicted RBP	12.25	□□□□□ -0.45
CBFB-208	ENST00000567947	CHGA	P10645	457 aa	Known RBP	12.24	□□□□□ -0.45
CBFB-208	ENST00000567947	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.24	□□□□□ -0.45
CBFB-208	ENST00000567947	SNPH	O15079	494 aa		12.19	□□□□□ -0.46
CBFB-208	ENST00000567947	NKX1-1	Q15270	411 aa	Predicted RBP	12.16	□□□□□ -0.46
CBFB-208	ENST00000567947	TMEM92	Q6UXU6	159 aa		12.16	□□□□□ -0.46
CBFB-208	ENST00000567947	FAM163A	Q96GL9	167 aa	Predicted RBP	12.16	□□□□□ -0.46
CBFB-208	ENST00000567947	POTEM	A6NI47	508 aa		12.15	□□□□□ -0.46
CBFB-208	ENST00000567947	RTN4	Q9NQC3	1192 aa	Known RBP	12.13	□□□□□ -0.47
CBFB-208	ENST00000567947	ST18	O60284	1047 aa		12.12	□□□□□ -0.47
CBFB-208	ENST00000567947	POTEG	Q6S5H5	508 aa		12.12	□□□□□ -0.47
CBFB-208	ENST00000567947	PPP1R37	O75864	691 aa		12.11	□□□□□ -0.47
CBFB-208	ENST00000567947	RYDEN	Q9NUL5	291 aa	Known RBP	12.11	□□□□□ -0.47
CBFB-208	ENST00000567947	HOXB3	P14651	431 aa	Predicted RBP	12.08	□□□□□ -0.48
CBFB-208	ENST00000567947	KIF3C	O14782	793 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms