RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 CLCN6P51797 869 aa11.06□□□□□ -0.64
HERPUD1-212ENST00000567944 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
HERPUD1-212ENST00000567944 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
HERPUD1-212ENST00000567944 PKD2Q13563 968 aa11.02□□□□□ -0.65
HERPUD1-212ENST00000567944 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
HERPUD1-212ENST00000567944 RASEFQ8IZ41 740 aa10.99□□□□□ -0.65
HERPUD1-212ENST00000567944 NPM1P06748 294 aaKnown RBP eCLIP10.96□□□□□ -0.65
HERPUD1-212ENST00000567944 POTEB2H3BUK9 544 aa10.94□□□□□ -0.66
HERPUD1-212ENST00000567944 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
HERPUD1-212ENST00000567944 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
HERPUD1-212ENST00000567944 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
HERPUD1-212ENST00000567944 GSE1Q14687 1217 aa10.87□□□□□ -0.67
HERPUD1-212ENST00000567944 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
HERPUD1-212ENST00000567944 FAM212AQ96EL1 285 aa10.86□□□□□ -0.67
HERPUD1-212ENST00000567944 TSPYL2Q9H2G4 693 aaPredicted RBP10.84□□□□□ -0.67
HERPUD1-212ENST00000567944 POTEMA6NI47 508 aa10.83□□□□□ -0.68
HERPUD1-212ENST00000567944 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
HERPUD1-212ENST00000567944 PELP1Q8IZL8 1130 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-212ENST00000567944 PAK3O75914 559 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-212ENST00000567944 CCDC61Q9Y6R9 512 aa10.81□□□□□ -0.68
HERPUD1-212ENST00000567944 RGL2O15211 777 aa10.79□□□□□ -0.68
HERPUD1-212ENST00000567944 CHRM1P11229 460 aaPredicted RBP10.78□□□□□ -0.68
HERPUD1-212ENST00000567944 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
HERPUD1-212ENST00000567944 RNF25Q96BH1 459 aaPredicted RBP10.78□□□□□ -0.68
HERPUD1-212ENST00000567944 TRIM41Q8WV44 630 aa10.77□□□□□ -0.69
HERPUD1-212ENST00000567944 PYGBP11216 843 aa10.76□□□□□ -0.69
HERPUD1-212ENST00000567944 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
HERPUD1-212ENST00000567944 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
HERPUD1-212ENST00000567944 METRNQ9UJH8 293 aa10.7□□□□□ -0.7
HERPUD1-212ENST00000567944 KIF12Q96FN5 646 aa10.69□□□□□ -0.7
HERPUD1-212ENST00000567944 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-212ENST00000567944 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-212ENST00000567944 MAP3K13O43283 966 aa10.66□□□□□ -0.7
HERPUD1-212ENST00000567944 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.7
HERPUD1-212ENST00000567944 SLC39A7Q92504 469 aa10.64□□□□□ -0.71
HERPUD1-212ENST00000567944 C7P10643 843 aa10.63□□□□□ -0.71
HERPUD1-212ENST00000567944 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
HERPUD1-212ENST00000567944 PCDHB8Q9UN66 801 aa10.62□□□□□ -0.71
HERPUD1-212ENST00000567944 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
HERPUD1-212ENST00000567944 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
HERPUD1-212ENST00000567944 DCAF8L2P0C7V8 631 aa10.59□□□□□ -0.71
HERPUD1-212ENST00000567944 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
HERPUD1-212ENST00000567944 FAM163AQ96GL9 167 aaPredicted RBP10.59□□□□□ -0.71
HERPUD1-212ENST00000567944 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-212ENST00000567944 ZNF467Q7Z7K2 595 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-212ENST00000567944 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
HERPUD1-212ENST00000567944 VGFO15240 615 aaPredicted RBP10.56□□□□□ -0.72
HERPUD1-212ENST00000567944 MAMSTRQ6ZN01 415 aa10.56□□□□□ -0.72
HERPUD1-212ENST00000567944 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
HERPUD1-212ENST00000567944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-212ENST00000567944 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-212ENST00000567944 CHGAP10645 457 aaKnown RBP10.53□□□□□ -0.72
HERPUD1-212ENST00000567944 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
HERPUD1-212ENST00000567944 SCUBE2Q9NQ36 999 aa10.52□□□□□ -0.73
HERPUD1-212ENST00000567944 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
HERPUD1-212ENST00000567944 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
HERPUD1-212ENST00000567944 PSEN1P49768 467 aa10.5□□□□□ -0.73
HERPUD1-212ENST00000567944 DNAJC5Q9H3Z4 198 aa10.48□□□□□ -0.73
HERPUD1-212ENST00000567944 BMP2KQ9NSY1 1161 aaPredicted RBP10.48□□□□□ -0.73
HERPUD1-212ENST00000567944 TAOK2Q9UL54 1235 aa10.48□□□□□ -0.73
HERPUD1-212ENST00000567944 STK25O00506 426 aa10.47□□□□□ -0.73
HERPUD1-212ENST00000567944 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-212ENST00000567944 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
HERPUD1-212ENST00000567944 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
HERPUD1-212ENST00000567944 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
HERPUD1-212ENST00000567944 TIE1P35590 1138 aa10.41□□□□□ -0.74
HERPUD1-212ENST00000567944 TTLL13PA6NNM8 815 aa10.4□□□□□ -0.74
HERPUD1-212ENST00000567944 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
HERPUD1-212ENST00000567944 COLQQ9Y215 455 aaPredicted RBP10.4□□□□□ -0.74
HERPUD1-212ENST00000567944 SEC24BO95487 1268 aa10.36□□□□□ -0.75
HERPUD1-212ENST00000567944 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
HERPUD1-212ENST00000567944 PLCB2Q00722 1185 aa10.35□□□□□ -0.75
HERPUD1-212ENST00000567944 CDAN1Q8IWY9 1227 aa10.35□□□□□ -0.75
HERPUD1-212ENST00000567944 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
HERPUD1-212ENST00000567944 GTPBP6O43824 516 aaPredicted RBP10.33□□□□□ -0.76
HERPUD1-212ENST00000567944 MFRPQ9BY79 579 aa10.32□□□□□ -0.76
HERPUD1-212ENST00000567944 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
HERPUD1-212ENST00000567944 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
HERPUD1-212ENST00000567944 PAXIP1Q6ZW49 1069 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-212ENST00000567944 FBXO22Q8NEZ5 403 aa10.29□□□□□ -0.76
HERPUD1-212ENST00000567944 SPRYD3Q8NCJ5 442 aa10.28□□□□□ -0.76
HERPUD1-212ENST00000567944 SOX12O15370 315 aa10.27□□□□□ -0.77
HERPUD1-212ENST00000567944 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
HERPUD1-212ENST00000567944 CFAP44Q96MT7 982 aa10.27□□□□□ -0.77
HERPUD1-212ENST00000567944 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
HERPUD1-212ENST00000567944 ST18O60284 1047 aa10.25□□□□□ -0.77
HERPUD1-212ENST00000567944 SLAIN1Q8ND83 568 aa10.25□□□□□ -0.77
HERPUD1-212ENST00000567944 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
HERPUD1-212ENST00000567944 IER5LQ5T953 404 aa10.23□□□□□ -0.77
HERPUD1-212ENST00000567944 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
HERPUD1-212ENST00000567944 PPP1R37O75864 691 aa10.21□□□□□ -0.77
HERPUD1-212ENST00000567944 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
HERPUD1-212ENST00000567944 GOLGA2Q08379 1002 aa10.21□□□□□ -0.77
HERPUD1-212ENST00000567944 NLRP6P59044 892 aa10.2□□□□□ -0.78
HERPUD1-212ENST00000567944 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
HERPUD1-212ENST00000567944 SLC24A1O60721 1099 aa10.18□□□□□ -0.78
HERPUD1-212ENST00000567944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.18□□□□□ -0.78
HERPUD1-212ENST00000567944 TSHZ2Q9NRE2 1034 aa10.17□□□□□ -0.78
HERPUD1-212ENST00000567944 DPY19L2Q6NUT2 758 aa10.16□□□□□ -0.78
HERPUD1-212ENST00000567944 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms