RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 KLHL34Q8N239 644 aa18.92■□□□□ 0.62
CCP110-208ENST00000566523 IFNLR1Q8IU57 520 aaPredicted RBP18.91■□□□□ 0.62
CCP110-208ENST00000566523 GALR2O43603 387 aaPredicted RBP18.88■□□□□ 0.61
CCP110-208ENST00000566523 FAM212AQ96EL1 285 aa18.84■□□□□ 0.61
CCP110-208ENST00000566523 KIF12Q96FN5 646 aa18.82■□□□□ 0.6
CCP110-208ENST00000566523 POTEIP0CG38 1075 aa18.8■□□□□ 0.6
CCP110-208ENST00000566523 MS4A3Q96HJ5 214 aa18.78■□□□□ 0.6
CCP110-208ENST00000566523 DCAF8Q5TAQ9 597 aa18.75■□□□□ 0.59
CCP110-208ENST00000566523 SPOCK2Q92563 424 aa18.74■□□□□ 0.59
CCP110-208ENST00000566523 DCBLD2Q96PD2 775 aa18.73■□□□□ 0.59
CCP110-208ENST00000566523 MAP3K13O43283 966 aa18.72■□□□□ 0.59
CCP110-208ENST00000566523 GSE1Q14687 1217 aa18.65■□□□□ 0.58
CCP110-208ENST00000566523 SGIP1Q9BQI5 828 aa18.63■□□□□ 0.57
CCP110-208ENST00000566523 PYGBP11216 843 aa18.59■□□□□ 0.57
CCP110-208ENST00000566523 PCDHB13Q9Y5F0 798 aa18.59■□□□□ 0.57
CCP110-208ENST00000566523 TRPC6Q9Y210 931 aa18.57■□□□□ 0.56
CCP110-208ENST00000566523 ASTLQ6HA08 431 aaPredicted RBP18.55■□□□□ 0.56
CCP110-208ENST00000566523 IFNL1Q8IU54 200 aa18.53■□□□□ 0.56
CCP110-208ENST00000566523 ATMINO43313 823 aaPredicted RBP18.52■□□□□ 0.56
CCP110-208ENST00000566523 CHRM1P11229 460 aaPredicted RBP18.49■□□□□ 0.55
CCP110-208ENST00000566523 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
CCP110-208ENST00000566523 CIZ1Q9ULV3 898 aaPredicted RBP18.49■□□□□ 0.55
CCP110-208ENST00000566523 TIE1P35590 1138 aa18.48■□□□□ 0.55
CCP110-208ENST00000566523 BMP2KQ9NSY1 1161 aaPredicted RBP18.47■□□□□ 0.55
CCP110-208ENST00000566523 ATN1P54259 1190 aaPredicted RBP18.43■□□□□ 0.54
CCP110-208ENST00000566523 PCDHB8Q9UN66 801 aa18.4■□□□□ 0.54
CCP110-208ENST00000566523 TTLL13PA6NNM8 815 aa18.39■□□□□ 0.53
CCP110-208ENST00000566523 LHX8Q68G74 356 aa18.34■□□□□ 0.53
CCP110-208ENST00000566523 ZNF467Q7Z7K2 595 aaPredicted RBP18.34■□□□□ 0.53
CCP110-208ENST00000566523 SLC39A7Q92504 469 aa18.32■□□□□ 0.52
CCP110-208ENST00000566523 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
CCP110-208ENST00000566523 TMEM106CQ9BVX2 250 aa18.3■□□□□ 0.52
CCP110-208ENST00000566523 C7P10643 843 aa18.29■□□□□ 0.52
CCP110-208ENST00000566523 METRNQ9UJH8 293 aa18.28■□□□□ 0.52
CCP110-208ENST00000566523 TRIM35Q9UPQ4 493 aa18.25■□□□□ 0.51
CCP110-208ENST00000566523 POTEB2H3BUK9 544 aa18.19■□□□□ 0.5
CCP110-208ENST00000566523 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
CCP110-208ENST00000566523 PSEN1P49768 467 aa18.16■□□□□ 0.5
CCP110-208ENST00000566523 IER5LQ5T953 404 aa18.15■□□□□ 0.5
CCP110-208ENST00000566523 PDAP1Q13442 181 aaKnown RBP18.14■□□□□ 0.49
CCP110-208ENST00000566523 RNF25Q96BH1 459 aaPredicted RBP18.11■□□□□ 0.49
CCP110-208ENST00000566523 PKD2Q13563 968 aa18.1■□□□□ 0.49
CCP110-208ENST00000566523 COLQQ9Y215 455 aaPredicted RBP18.09■□□□□ 0.49
CCP110-208ENST00000566523 RIOK3O14730 519 aaKnown RBP18.04■□□□□ 0.48
CCP110-208ENST00000566523 SEC24BO95487 1268 aa18.04■□□□□ 0.48
CCP110-208ENST00000566523 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
CCP110-208ENST00000566523 IRX5P78411 483 aaPredicted RBP18.02■□□□□ 0.48
CCP110-208ENST00000566523 ECM2O94769 699 aaPredicted RBP18.01■□□□□ 0.47
CCP110-208ENST00000566523 OTUD5Q96G74 571 aa17.99■□□□□ 0.47
CCP110-208ENST00000566523 VGFO15240 615 aaPredicted RBP17.95■□□□□ 0.46
CCP110-208ENST00000566523 GOLGA2Q08379 1002 aa17.95■□□□□ 0.46
CCP110-208ENST00000566523 PLCG2P16885 1265 aa17.94■□□□□ 0.46
CCP110-208ENST00000566523 MKRN3Q13064 507 aaKnown RBP17.93■□□□□ 0.46
CCP110-208ENST00000566523 OCEL1Q9H607 264 aa17.93■□□□□ 0.46
CCP110-208ENST00000566523 CABP2Q9NPB3 220 aa17.93■□□□□ 0.46
CCP110-208ENST00000566523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.9■□□□□ 0.46
CCP110-208ENST00000566523 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
CCP110-208ENST00000566523 RGL2O15211 777 aa17.89■□□□□ 0.45
CCP110-208ENST00000566523 MAMSTRQ6ZN01 415 aa17.87■□□□□ 0.45
CCP110-208ENST00000566523 ILDR1Q86SU0 546 aaPredicted RBP17.85■□□□□ 0.45
CCP110-208ENST00000566523 PDCD7Q8N8D1 485 aaKnown RBP17.85■□□□□ 0.45
CCP110-208ENST00000566523 TAOK2Q9UL54 1235 aa17.83■□□□□ 0.44
CCP110-208ENST00000566523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.445e-7■■■■■ 27
CCP110-208ENST00000566523 EFCAB3Q8N7B9 438 aa17.8■□□□□ 0.44
CCP110-208ENST00000566523 SCUBE2Q9NQ36 999 aa17.8■□□□□ 0.44
CCP110-208ENST00000566523 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
CCP110-208ENST00000566523 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
CCP110-208ENST00000566523 STK24Q9Y6E0 443 aa17.69■□□□□ 0.42
CCP110-208ENST00000566523 STK25O00506 426 aa17.68■□□□□ 0.42
CCP110-208ENST00000566523 SOX12O15370 315 aa17.68■□□□□ 0.42
CCP110-208ENST00000566523 L3MBTL3Q96JM7 780 aaPredicted RBP17.66■□□□□ 0.42
CCP110-208ENST00000566523 PHF8Q9UPP1 1060 aa17.6■□□□□ 0.41
CCP110-208ENST00000566523 MS4A4AQ96JQ5 239 aa17.58■□□□□ 0.4
CCP110-208ENST00000566523 SLAIN1Q8ND83 568 aa17.56■□□□□ 0.4
CCP110-208ENST00000566523 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.55■□□□□ 0.4
CCP110-208ENST00000566523 BOLA1Q9Y3E2 137 aa17.54■□□□□ 0.4
CCP110-208ENST00000566523 FBXO22Q8NEZ5 403 aa17.53■□□□□ 0.4
CCP110-208ENST00000566523 NLRP6P59044 892 aa17.52■□□□□ 0.4
CCP110-208ENST00000566523 HS6ST3Q8IZP7 471 aa17.52■□□□□ 0.4
CCP110-208ENST00000566523 MFRPQ9BY79 579 aa17.52■□□□□ 0.4
CCP110-208ENST00000566523 C3orf67Q6ZVT6 689 aa17.5■□□□□ 0.39
CCP110-208ENST00000566523 TMEM121BQ9BXQ6 578 aaPredicted RBP17.5■□□□□ 0.39
CCP110-208ENST00000566523 G3V3G9 751 aa17.46■□□□□ 0.39
CCP110-208ENST00000566523 CHGAP10645 457 aaKnown RBP17.45■□□□□ 0.38
CCP110-208ENST00000566523 MICALL2Q8IY33 904 aa17.42■□□□□ 0.38
CCP110-208ENST00000566523 LCE2DQ5TA82 110 aaPredicted RBP17.38■□□□□ 0.37
CCP110-208ENST00000566523 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
CCP110-208ENST00000566523 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
CCP110-208ENST00000566523 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
CCP110-208ENST00000566523 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
CCP110-208ENST00000566523 RTN4Q9NQC3 1192 aaKnown RBP17.29■□□□□ 0.36
CCP110-208ENST00000566523 TMEM92Q6UXU6 159 aa17.28■□□□□ 0.36
CCP110-208ENST00000566523 SNPHO15079 494 aa17.27■□□□□ 0.36
CCP110-208ENST00000566523 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
CCP110-208ENST00000566523 PPP1R37O75864 691 aa17.25■□□□□ 0.35
CCP110-208ENST00000566523 ST18O60284 1047 aa17.23■□□□□ 0.35
CCP110-208ENST00000566523 POTEMA6NI47 508 aa17.21■□□□□ 0.35
CCP110-208ENST00000566523 POTEGQ6S5H5 508 aa17.2■□□□□ 0.34
CCP110-208ENST00000566523 HOXB3P14651 431 aaPredicted RBP17.14■□□□□ 0.33
CCP110-208ENST00000566523 RYDENQ9NUL5 291 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms