RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
CNOT1-209ENST00000566240 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
CNOT1-209ENST00000566240 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
CNOT1-209ENST00000566240 RGL2O15211 777 aa11.52□□□□□ -0.57
CNOT1-209ENST00000566240 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
CNOT1-209ENST00000566240 LHX8Q68G74 356 aa11.51□□□□□ -0.57
CNOT1-209ENST00000566240 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
CNOT1-209ENST00000566240 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
CNOT1-209ENST00000566240 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
CNOT1-209ENST00000566240 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
CNOT1-209ENST00000566240 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
CNOT1-209ENST00000566240 CLCN6P51797 869 aa11.43□□□□□ -0.58
CNOT1-209ENST00000566240 BCANQ96GW7 911 aa11.43□□□□□ -0.58
CNOT1-209ENST00000566240 CFAP44Q96MT7 982 aa11.43□□□□□ -0.58
CNOT1-209ENST00000566240 SPRYD3Q8NCJ5 442 aa11.38□□□□□ -0.59
CNOT1-209ENST00000566240 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
CNOT1-209ENST00000566240 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
CNOT1-209ENST00000566240 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
CNOT1-209ENST00000566240 CHGAP10645 457 aaKnown RBP11.36□□□□□ -0.59
CNOT1-209ENST00000566240 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-209ENST00000566240 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
CNOT1-209ENST00000566240 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
CNOT1-209ENST00000566240 GSE1Q14687 1217 aa11.31□□□□□ -0.6
CNOT1-209ENST00000566240 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
CNOT1-209ENST00000566240 TSHZ2Q9NRE2 1034 aa11.28□□□□□ -0.6
CNOT1-209ENST00000566240 NUBP1P53384 320 aa11.27□□□□□ -0.61
CNOT1-209ENST00000566240 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
CNOT1-209ENST00000566240 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
CNOT1-209ENST00000566240 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
CNOT1-209ENST00000566240 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
CNOT1-209ENST00000566240 PRKCSHP14314 528 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-209ENST00000566240 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
CNOT1-209ENST00000566240 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
CNOT1-209ENST00000566240 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
CNOT1-209ENST00000566240 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
CNOT1-209ENST00000566240 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
CNOT1-209ENST00000566240 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
CNOT1-209ENST00000566240 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
CNOT1-209ENST00000566240 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-209ENST00000566240 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
CNOT1-209ENST00000566240 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
CNOT1-209ENST00000566240 RASEFQ8IZ41 740 aa11.09□□□□□ -0.63
CNOT1-209ENST00000566240 VGFO15240 615 aaPredicted RBP11.08□□□□□ -0.64
CNOT1-209ENST00000566240 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
CNOT1-209ENST00000566240 ASTLQ6HA08 431 aaPredicted RBP11.08□□□□□ -0.64
CNOT1-209ENST00000566240 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
CNOT1-209ENST00000566240 STK25O00506 426 aa11.07□□□□□ -0.64
CNOT1-209ENST00000566240 ATMINO43313 823 aaPredicted RBP11.06□□□□□ -0.64
CNOT1-209ENST00000566240 GTPBP6O43824 516 aaPredicted RBP11.05□□□□□ -0.64
CNOT1-209ENST00000566240 METRNQ9UJH8 293 aa11.04□□□□□ -0.64
CNOT1-209ENST00000566240 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
CNOT1-209ENST00000566240 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
CNOT1-209ENST00000566240 PYGBP11216 843 aa11□□□□□ -0.65
CNOT1-209ENST00000566240 SLC39A7Q92504 469 aa11□□□□□ -0.65
CNOT1-209ENST00000566240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-209ENST00000566240 NBR1Q14596 966 aa10.99□□□□□ -0.65
CNOT1-209ENST00000566240 ZFP91Q96JP5 570 aaPredicted RBP10.99□□□□□ -0.65
CNOT1-209ENST00000566240 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
CNOT1-209ENST00000566240 C7P10643 843 aa10.98□□□□□ -0.65
CNOT1-209ENST00000566240 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
CNOT1-209ENST00000566240 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
CNOT1-209ENST00000566240 ATN1P54259 1190 aaPredicted RBP10.97□□□□□ -0.65
CNOT1-209ENST00000566240 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
CNOT1-209ENST00000566240 MAP3K13O43283 966 aa10.95□□□□□ -0.66
CNOT1-209ENST00000566240 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
CNOT1-209ENST00000566240 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
CNOT1-209ENST00000566240 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
CNOT1-209ENST00000566240 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
CNOT1-209ENST00000566240 TIE1P35590 1138 aa10.88□□□□□ -0.67
CNOT1-209ENST00000566240 POTEMA6NI47 508 aa10.85□□□□□ -0.67
CNOT1-209ENST00000566240 MAMSTRQ6ZN01 415 aa10.85□□□□□ -0.67
CNOT1-209ENST00000566240 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
CNOT1-209ENST00000566240 TTLL13PA6NNM8 815 aa10.84□□□□□ -0.67
CNOT1-209ENST00000566240 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
CNOT1-209ENST00000566240 PDAP1Q13442 181 aaKnown RBP10.81□□□□□ -0.68
CNOT1-209ENST00000566240 PCDHB13Q9Y5F0 798 aa10.81□□□□□ -0.68
CNOT1-209ENST00000566240 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
CNOT1-209ENST00000566240 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-209ENST00000566240 PCDHB8Q9UN66 801 aa10.78□□□□□ -0.68
CNOT1-209ENST00000566240 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
CNOT1-209ENST00000566240 IFNL1Q8IU54 200 aa10.76□□□□□ -0.69
CNOT1-209ENST00000566240 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
CNOT1-209ENST00000566240 SEC24BO95487 1268 aa10.74□□□□□ -0.69
CNOT1-209ENST00000566240 PSEN1P49768 467 aa10.73□□□□□ -0.69
CNOT1-209ENST00000566240 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
CNOT1-209ENST00000566240 IER5LQ5T953 404 aa10.71□□□□□ -0.69
CNOT1-209ENST00000566240 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
CNOT1-209ENST00000566240 WDR70Q9NW82 654 aa10.71□□□□□ -0.69
CNOT1-209ENST00000566240 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
CNOT1-209ENST00000566240 TMEM106CQ9BVX2 250 aa10.69□□□□□ -0.7
CNOT1-209ENST00000566240 MFRPQ9BY79 579 aa10.69□□□□□ -0.7
CNOT1-209ENST00000566240 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
CNOT1-209ENST00000566240 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
CNOT1-209ENST00000566240 PLCG2P16885 1265 aa10.61□□□□□ -0.71
CNOT1-209ENST00000566240 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
CNOT1-209ENST00000566240 PPP1R37O75864 691 aa10.6□□□□□ -0.71
CNOT1-209ENST00000566240 NLRP6P59044 892 aa10.6□□□□□ -0.71
CNOT1-209ENST00000566240 SOX12O15370 315 aa10.59□□□□□ -0.71
CNOT1-209ENST00000566240 IRX5P78411 483 aaPredicted RBP10.59□□□□□ -0.71
CNOT1-209ENST00000566240 FBXO22Q8NEZ5 403 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms