RNA–Protein interactions for RNA: ENST00000565548.1

TUBGCP4-210, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 762 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-210ENST00000565548 NUBP1P53384 320 aa14.24□□□□□ -0.13
TUBGCP4-210ENST00000565548 NKX1-1Q15270 411 aaPredicted RBP14.14□□□□□ -0.15
TUBGCP4-210ENST00000565548 RIOK3O14730 519 aaKnown RBP14.13□□□□□ -0.15
TUBGCP4-210ENST00000565548 DCAF8Q5TAQ9 597 aa14.13□□□□□ -0.15
TUBGCP4-210ENST00000565548 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP4-210ENST00000565548 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP4-210ENST00000565548 GTPBP6O43824 516 aaPredicted RBP14.08□□□□□ -0.16
TUBGCP4-210ENST00000565548 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
TUBGCP4-210ENST00000565548 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
TUBGCP4-210ENST00000565548 NBR1Q14596 966 aa14.06□□□□□ -0.16
TUBGCP4-210ENST00000565548 CHRM1P11229 460 aaPredicted RBP14.03□□□□□ -0.16
TUBGCP4-210ENST00000565548 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
TUBGCP4-210ENST00000565548 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
TUBGCP4-210ENST00000565548 VGFO15240 615 aaPredicted RBP14.02□□□□□ -0.17
TUBGCP4-210ENST00000565548 STK25O00506 426 aa14□□□□□ -0.17
TUBGCP4-210ENST00000565548 SGIP1Q9BQI5 828 aa13.99□□□□□ -0.17
TUBGCP4-210ENST00000565548 PRR29P0C7W0 189 aa13.98□□□□□ -0.17
TUBGCP4-210ENST00000565548 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
TUBGCP4-210ENST00000565548 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
TUBGCP4-210ENST00000565548 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
TUBGCP4-210ENST00000565548 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
TUBGCP4-210ENST00000565548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.9□□□□□ -0.18
TUBGCP4-210ENST00000565548 ZFP91Q96JP5 570 aaPredicted RBP13.9□□□□□ -0.18
TUBGCP4-210ENST00000565548 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
TUBGCP4-210ENST00000565548 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
TUBGCP4-210ENST00000565548 ABCC9O60706 1549 aa13.88□□□□□ -0.19
TUBGCP4-210ENST00000565548 PYGBP11216 843 aa13.84□□□□□ -0.19
TUBGCP4-210ENST00000565548 RYDENQ9NUL5 291 aaKnown RBP13.84□□□□□ -0.19
TUBGCP4-210ENST00000565548 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
TUBGCP4-210ENST00000565548 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
TUBGCP4-210ENST00000565548 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
TUBGCP4-210ENST00000565548 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
TUBGCP4-210ENST00000565548 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
TUBGCP4-210ENST00000565548 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
TUBGCP4-210ENST00000565548 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
TUBGCP4-210ENST00000565548 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
TUBGCP4-210ENST00000565548 WDR70Q9NW82 654 aa13.57□□□□□ -0.24
TUBGCP4-210ENST00000565548 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
TUBGCP4-210ENST00000565548 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
TUBGCP4-210ENST00000565548 FARP1Q9Y4F1 1045 aaPredicted RBP13.54□□□□□ -0.24
TUBGCP4-210ENST00000565548 MFRPQ9BY79 579 aa13.53□□□□□ -0.24
TUBGCP4-210ENST00000565548 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
TUBGCP4-210ENST00000565548 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
TUBGCP4-210ENST00000565548 PSEN1P49768 467 aa13.51□□□□□ -0.25
TUBGCP4-210ENST00000565548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
TUBGCP4-210ENST00000565548 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
TUBGCP4-210ENST00000565548 ZNF579Q8NAF0 562 aaKnown RBP13.5□□□□□ -0.25
TUBGCP4-210ENST00000565548 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
TUBGCP4-210ENST00000565548 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
TUBGCP4-210ENST00000565548 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
TUBGCP4-210ENST00000565548 PPP1R37O75864 691 aa13.42□□□□□ -0.26
TUBGCP4-210ENST00000565548 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
TUBGCP4-210ENST00000565548 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
TUBGCP4-210ENST00000565548 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
TUBGCP4-210ENST00000565548 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
TUBGCP4-210ENST00000565548 EFCAB3Q8N7B9 438 aa13.37□□□□□ -0.27
TUBGCP4-210ENST00000565548 NLRP6P59044 892 aa13.36□□□□□ -0.27
TUBGCP4-210ENST00000565548 SOX12O15370 315 aa13.35□□□□□ -0.27
TUBGCP4-210ENST00000565548 E2F4Q16254 413 aa13.34□□□□□ -0.27
TUBGCP4-210ENST00000565548 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
TUBGCP4-210ENST00000565548 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
TUBGCP4-210ENST00000565548 MAP3K13O43283 966 aa13.32□□□□□ -0.28
TUBGCP4-210ENST00000565548 ERICH6Q7L0X2 663 aa13.32□□□□□ -0.28
TUBGCP4-210ENST00000565548 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
TUBGCP4-210ENST00000565548 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
TUBGCP4-210ENST00000565548 CCDC180Q9P1Z9 1646 aa13.3□□□□□ -0.28
TUBGCP4-210ENST00000565548 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
TUBGCP4-210ENST00000565548 ZC3H15Q8WU90 426 aaKnown RBP13.29□□□□□ -0.28
TUBGCP4-210ENST00000565548 TESPA1A2RU30 521 aaPredicted RBP13.28□□□□□ -0.28
TUBGCP4-210ENST00000565548 SEMA3EO15041 775 aa13.26□□□□□ -0.29
TUBGCP4-210ENST00000565548 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
TUBGCP4-210ENST00000565548 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
TUBGCP4-210ENST00000565548 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
TUBGCP4-210ENST00000565548 MFSD10Q14728 455 aa13.2□□□□□ -0.3
TUBGCP4-210ENST00000565548 PDE4AP27815 886 aa13.18□□□□□ -0.3
TUBGCP4-210ENST00000565548 LARP6Q9BRS8 491 aaKnown RBP13.18□□□□□ -0.3
TUBGCP4-210ENST00000565548 CRISPLD2Q9H0B8 497 aa13.17□□□□□ -0.3
TUBGCP4-210ENST00000565548 ARIH1Q9Y4X5 557 aaPredicted RBP13.17□□□□□ -0.3
TUBGCP4-210ENST00000565548 SLC24A3Q9HC58 644 aa13.16□□□□□ -0.3
TUBGCP4-210ENST00000565548 PIP4P2Q8N4L2 257 aa13.13□□□□□ -0.31
TUBGCP4-210ENST00000565548 ZMYND10O75800 440 aa13.11□□□□□ -0.31
TUBGCP4-210ENST00000565548 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
TUBGCP4-210ENST00000565548 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
TUBGCP4-210ENST00000565548 SMYD5Q6GMV2 418 aa13.11□□□□□ -0.31
TUBGCP4-210ENST00000565548 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
TUBGCP4-210ENST00000565548 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
TUBGCP4-210ENST00000565548 C14orf37Q86TY3 774 aa13.1□□□□□ -0.31
TUBGCP4-210ENST00000565548 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
TUBGCP4-210ENST00000565548 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
TUBGCP4-210ENST00000565548 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
TUBGCP4-210ENST00000565548 ARXQ96QS3 562 aa13.04□□□□□ -0.32
TUBGCP4-210ENST00000565548 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
TUBGCP4-210ENST00000565548 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
TUBGCP4-210ENST00000565548 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
TUBGCP4-210ENST00000565548 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
TUBGCP4-210ENST00000565548 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
TUBGCP4-210ENST00000565548 ILDR1Q86SU0 546 aaPredicted RBP12.97□□□□□ -0.33
TUBGCP4-210ENST00000565548 MS4A3Q96HJ5 214 aa12.96□□□□□ -0.33
TUBGCP4-210ENST00000565548 MLLT3P42568 568 aaPredicted RBP12.95□□□□□ -0.34
TUBGCP4-210ENST00000565548 PPP1R15BQ5SWA1 713 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms