RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
CAPN3-214ENST00000565274 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
CAPN3-214ENST00000565274 CCDC61Q9Y6R9 512 aa9.82□□□□□ -0.84
CAPN3-214ENST00000565274 ATMINO43313 823 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-214ENST00000565274 FKBP8Q14318 412 aa9.79□□□□□ -0.84
CAPN3-214ENST00000565274 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
CAPN3-214ENST00000565274 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
CAPN3-214ENST00000565274 ASTLQ6HA08 431 aaPredicted RBP9.78□□□□□ -0.84
CAPN3-214ENST00000565274 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
CAPN3-214ENST00000565274 METRNQ9UJH8 293 aa9.78□□□□□ -0.84
CAPN3-214ENST00000565274 MAP3K13O43283 966 aa9.75□□□□□ -0.85
CAPN3-214ENST00000565274 ATN1P54259 1190 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-214ENST00000565274 SLC39A7Q92504 469 aa9.74□□□□□ -0.85
CAPN3-214ENST00000565274 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
CAPN3-214ENST00000565274 C7P10643 843 aa9.73□□□□□ -0.85
CAPN3-214ENST00000565274 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
CAPN3-214ENST00000565274 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
CAPN3-214ENST00000565274 ZBTB47Q9UFB7 747 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-214ENST00000565274 NUBP1P53384 320 aa9.66□□□□□ -0.86
CAPN3-214ENST00000565274 PLSCR2Q9NRY7 297 aa9.65□□□□□ -0.86
CAPN3-214ENST00000565274 TIE1P35590 1138 aa9.64□□□□□ -0.87
CAPN3-214ENST00000565274 PCDHB13Q9Y5F0 798 aa9.64□□□□□ -0.87
CAPN3-214ENST00000565274 TTLL13PA6NNM8 815 aa9.62□□□□□ -0.87
CAPN3-214ENST00000565274 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
CAPN3-214ENST00000565274 FAM212AQ96EL1 285 aa9.61□□□□□ -0.87
CAPN3-214ENST00000565274 POTEFA5A3E0 1075 aa9.6□□□□□ -0.87
CAPN3-214ENST00000565274 SEC24BO95487 1268 aa9.6□□□□□ -0.87
CAPN3-214ENST00000565274 DCAF8Q5TAQ9 597 aa9.59□□□□□ -0.87
CAPN3-214ENST00000565274 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
CAPN3-214ENST00000565274 POTEMA6NI47 508 aa9.58□□□□□ -0.88
CAPN3-214ENST00000565274 IFNL1Q8IU54 200 aa9.58□□□□□ -0.88
CAPN3-214ENST00000565274 TRIM35Q9UPQ4 493 aa9.57□□□□□ -0.88
CAPN3-214ENST00000565274 COLQQ9Y215 455 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-214ENST00000565274 POTEGQ6S5H5 508 aa9.56□□□□□ -0.88
CAPN3-214ENST00000565274 SGIP1Q9BQI5 828 aa9.56□□□□□ -0.88
CAPN3-214ENST00000565274 FAM163AQ96GL9 167 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-214ENST00000565274 FBXO3Q9UK99 471 aa9.55□□□□□ -0.88
CAPN3-214ENST00000565274 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
CAPN3-214ENST00000565274 PYGBP11216 843 aa9.53□□□□□ -0.88
CAPN3-214ENST00000565274 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
CAPN3-214ENST00000565274 IER5LQ5T953 404 aa9.48□□□□□ -0.89
CAPN3-214ENST00000565274 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
CAPN3-214ENST00000565274 VASPP50552 380 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-214ENST00000565274 PLCG2P16885 1265 aa9.45□□□□□ -0.9
CAPN3-214ENST00000565274 LCE2DQ5TA82 110 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-214ENST00000565274 SLAIN1Q8ND83 568 aa9.4□□□□□ -0.9
CAPN3-214ENST00000565274 GSE1Q14687 1217 aa9.39□□□□□ -0.91
CAPN3-214ENST00000565274 IRX5P78411 483 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-214ENST00000565274 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
CAPN3-214ENST00000565274 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
CAPN3-214ENST00000565274 ZNF467Q7Z7K2 595 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-214ENST00000565274 GOLGA2Q08379 1002 aa9.32□□□□□ -0.92
CAPN3-214ENST00000565274 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-214ENST00000565274 MYT1Q01538 1121 aa9.3□□□□□ -0.92
CAPN3-214ENST00000565274 PSEN1P49768 467 aa9.29□□□□□ -0.92
CAPN3-214ENST00000565274 MKRN3Q13064 507 aaKnown RBP9.29□□□□□ -0.92
CAPN3-214ENST00000565274 IFNLR1Q8IU57 520 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-214ENST00000565274 ST18O60284 1047 aa9.28□□□□□ -0.92
CAPN3-214ENST00000565274 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
CAPN3-214ENST00000565274 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
CAPN3-214ENST00000565274 TTBK1Q5TCY1 1321 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-214ENST00000565274 CHRM1P11229 460 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-214ENST00000565274 CDAN1Q8IWY9 1227 aa9.26□□□□□ -0.93
CAPN3-214ENST00000565274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.25□□□□□ -0.93
CAPN3-214ENST00000565274 PDCD7Q8N8D1 485 aaKnown RBP9.24□□□□□ -0.93
CAPN3-214ENST00000565274 DAXXQ9UER7 740 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-214ENST00000565274 PDAP1Q13442 181 aaKnown RBP9.22□□□□□ -0.93
CAPN3-214ENST00000565274 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
CAPN3-214ENST00000565274 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-214ENST00000565274 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
CAPN3-214ENST00000565274 SNPHO15079 494 aa9.19□□□□□ -0.94
CAPN3-214ENST00000565274 MARVELD3Q96A59 401 aa9.18□□□□□ -0.94
CAPN3-214ENST00000565274 DPY19L2Q6NUT2 758 aa9.17□□□□□ -0.94
CAPN3-214ENST00000565274 G3V3G9 751 aa9.13□□□□□ -0.95
CAPN3-214ENST00000565274 TMEM121BQ9BXQ6 578 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-214ENST00000565274 EMP3P54852 163 aa9.08□□□□□ -0.96
CAPN3-214ENST00000565274 BOLA1Q9Y3E2 137 aa9.08□□□□□ -0.96
CAPN3-214ENST00000565274 ILDR1Q86SU0 546 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-214ENST00000565274 EFCAB3Q8N7B9 438 aa9.07□□□□□ -0.96
CAPN3-214ENST00000565274 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
CAPN3-214ENST00000565274 TRIM41Q8WV44 630 aa9.05□□□□□ -0.96
CAPN3-214ENST00000565274 FAM205CA6NFA0 338 aa9.03□□□□□ -0.96
CAPN3-214ENST00000565274 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
CAPN3-214ENST00000565274 HS3ST6Q96QI5 342 aa9□□□□□ -0.97
CAPN3-214ENST00000565274 POTEB3A0JP26 581 aa8.99□□□□□ -0.97
CAPN3-214ENST00000565274 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
CAPN3-214ENST00000565274 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
CAPN3-214ENST00000565274 POTEBQ6S5H4 581 aa8.99□□□□□ -0.97
CAPN3-214ENST00000565274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-214ENST00000565274 ZNF710Q8N1W2 664 aa8.98□□□□□ -0.97
CAPN3-214ENST00000565274 RNF25Q96BH1 459 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-214ENST00000565274 ZFP91Q96JP5 570 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-214ENST00000565274 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-214ENST00000565274 VGFO15240 615 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-214ENST00000565274 PHF8Q9UPP1 1060 aa8.94□□□□□ -0.98
CAPN3-214ENST00000565274 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
CAPN3-214ENST00000565274 MICALL2Q8IY33 904 aa8.93□□□□□ -0.98
CAPN3-214ENST00000565274 SOX12O15370 315 aa8.92□□□□□ -0.98
CAPN3-214ENST00000565274 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
CAPN3-214ENST00000565274 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms