RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
ATP2A1-207ENST00000564470 CCDC61Q9Y6R9 512 aa9.83□□□□□ -0.84
ATP2A1-207ENST00000564470 MS4A3Q96HJ5 214 aa9.82□□□□□ -0.84
ATP2A1-207ENST00000564470 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
ATP2A1-207ENST00000564470 NUBP1P53384 320 aa9.77□□□□□ -0.85
ATP2A1-207ENST00000564470 MAP3K13O43283 966 aa9.75□□□□□ -0.85
ATP2A1-207ENST00000564470 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
ATP2A1-207ENST00000564470 KLHL34Q8N239 644 aa9.73□□□□□ -0.85
ATP2A1-207ENST00000564470 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
ATP2A1-207ENST00000564470 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
ATP2A1-207ENST00000564470 ATMINO43313 823 aaPredicted RBP9.71□□□□□ -0.86
ATP2A1-207ENST00000564470 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
ATP2A1-207ENST00000564470 ASTLQ6HA08 431 aaPredicted RBP9.7□□□□□ -0.86
ATP2A1-207ENST00000564470 PCDHB13Q9Y5F0 798 aa9.68□□□□□ -0.86
ATP2A1-207ENST00000564470 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
ATP2A1-207ENST00000564470 ATN1P54259 1190 aaPredicted RBP9.66□□□□□ -0.86
ATP2A1-207ENST00000564470 C7P10643 843 aa9.65□□□□□ -0.86
ATP2A1-207ENST00000564470 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
ATP2A1-207ENST00000564470 SGIP1Q9BQI5 828 aa9.64□□□□□ -0.87
ATP2A1-207ENST00000564470 BMP2KQ9NSY1 1161 aaPredicted RBP9.64□□□□□ -0.87
ATP2A1-207ENST00000564470 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
ATP2A1-207ENST00000564470 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
ATP2A1-207ENST00000564470 PYGBP11216 843 aa9.62□□□□□ -0.87
ATP2A1-207ENST00000564470 TIE1P35590 1138 aa9.62□□□□□ -0.87
ATP2A1-207ENST00000564470 IFNL1Q8IU54 200 aa9.6□□□□□ -0.87
ATP2A1-207ENST00000564470 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
ATP2A1-207ENST00000564470 GSE1Q14687 1217 aa9.57□□□□□ -0.88
ATP2A1-207ENST00000564470 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
ATP2A1-207ENST00000564470 IFNLR1Q8IU57 520 aaPredicted RBP9.55□□□□□ -0.88
ATP2A1-207ENST00000564470 SEC24BO95487 1268 aa9.54□□□□□ -0.88
ATP2A1-207ENST00000564470 SPOCK2Q92563 424 aa9.54□□□□□ -0.88
ATP2A1-207ENST00000564470 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
ATP2A1-207ENST00000564470 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
ATP2A1-207ENST00000564470 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
ATP2A1-207ENST00000564470 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
ATP2A1-207ENST00000564470 POTEJP0CG39 1038 aa9.5□□□□□ -0.89
ATP2A1-207ENST00000564470 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
ATP2A1-207ENST00000564470 MAMSTRQ6ZN01 415 aa9.49□□□□□ -0.89
ATP2A1-207ENST00000564470 COLQQ9Y215 455 aaPredicted RBP9.48□□□□□ -0.89
ATP2A1-207ENST00000564470 CHRM1P11229 460 aaPredicted RBP9.46□□□□□ -0.9
ATP2A1-207ENST00000564470 IER5LQ5T953 404 aa9.46□□□□□ -0.9
ATP2A1-207ENST00000564470 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
ATP2A1-207ENST00000564470 SCUBE2Q9NQ36 999 aa9.45□□□□□ -0.9
ATP2A1-207ENST00000564470 PLCG2P16885 1265 aa9.4□□□□□ -0.9
ATP2A1-207ENST00000564470 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
ATP2A1-207ENST00000564470 PSEN1P49768 467 aa9.37□□□□□ -0.91
ATP2A1-207ENST00000564470 IRX5P78411 483 aaPredicted RBP9.36□□□□□ -0.91
ATP2A1-207ENST00000564470 OCEL1Q9H607 264 aa9.36□□□□□ -0.91
ATP2A1-207ENST00000564470 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
ATP2A1-207ENST00000564470 PDAP1Q13442 181 aaKnown RBP9.33□□□□□ -0.92
ATP2A1-207ENST00000564470 FAM163AQ96GL9 167 aaPredicted RBP9.33□□□□□ -0.92
ATP2A1-207ENST00000564470 TRIM41Q8WV44 630 aa9.31□□□□□ -0.92
ATP2A1-207ENST00000564470 SLAIN1Q8ND83 568 aa9.29□□□□□ -0.92
ATP2A1-207ENST00000564470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATP2A1-207ENST00000564470 POTEMA6NI47 508 aa9.27□□□□□ -0.93
ATP2A1-207ENST00000564470 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
ATP2A1-207ENST00000564470 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
ATP2A1-207ENST00000564470 PDCD7Q8N8D1 485 aaKnown RBP9.24□□□□□ -0.93
ATP2A1-207ENST00000564470 L3MBTL3Q96JM7 780 aaPredicted RBP9.23□□□□□ -0.93
ATP2A1-207ENST00000564470 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.23□□□□□ -0.93
ATP2A1-207ENST00000564470 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
ATP2A1-207ENST00000564470 DPY19L2Q6NUT2 758 aa9.19□□□□□ -0.94
ATP2A1-207ENST00000564470 LCE2DQ5TA82 110 aaPredicted RBP9.18□□□□□ -0.94
ATP2A1-207ENST00000564470 C3orf67Q6ZVT6 689 aa9.18□□□□□ -0.94
ATP2A1-207ENST00000564470 G3V3G9 751 aa9.17□□□□□ -0.94
ATP2A1-207ENST00000564470 EFCAB3Q8N7B9 438 aa9.17□□□□□ -0.94
ATP2A1-207ENST00000564470 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
ATP2A1-207ENST00000564470 RNF25Q96BH1 459 aaPredicted RBP9.16□□□□□ -0.94
ATP2A1-207ENST00000564470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.15□□□□□ -0.94
ATP2A1-207ENST00000564470 VGFO15240 615 aaPredicted RBP9.15□□□□□ -0.94
ATP2A1-207ENST00000564470 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
ATP2A1-207ENST00000564470 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
ATP2A1-207ENST00000564470 SNPHO15079 494 aa9.13□□□□□ -0.95
ATP2A1-207ENST00000564470 ST18O60284 1047 aa9.13□□□□□ -0.95
ATP2A1-207ENST00000564470 ECM2O94769 699 aaPredicted RBP9.13□□□□□ -0.95
ATP2A1-207ENST00000564470 BOLA1Q9Y3E2 137 aa9.12□□□□□ -0.95
ATP2A1-207ENST00000564470 TAOK2Q9UL54 1235 aa9.11□□□□□ -0.95
ATP2A1-207ENST00000564470 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
ATP2A1-207ENST00000564470 SOX12O15370 315 aa9.09□□□□□ -0.95
ATP2A1-207ENST00000564470 BCL11BQ9C0K0 894 aaPredicted RBP9.06□□□□□ -0.96
ATP2A1-207ENST00000564470 PKD2Q13563 968 aa9.05□□□□□ -0.96
ATP2A1-207ENST00000564470 PHF8Q9UPP1 1060 aa9.05□□□□□ -0.96
ATP2A1-207ENST00000564470 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
ATP2A1-207ENST00000564470 STK25O00506 426 aa9.03□□□□□ -0.96
ATP2A1-207ENST00000564470 CDAN1Q8IWY9 1227 aa9.03□□□□□ -0.96
ATP2A1-207ENST00000564470 RGL2O15211 777 aa9.01□□□□□ -0.97
ATP2A1-207ENST00000564470 MARVELD3Q96A59 401 aa9.01□□□□□ -0.97
ATP2A1-207ENST00000564470 TMEM121BQ9BXQ6 578 aaPredicted RBP9.01□□□□□ -0.97
ATP2A1-207ENST00000564470 NLRP6P59044 892 aa9□□□□□ -0.97
ATP2A1-207ENST00000564470 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
ATP2A1-207ENST00000564470 MICALL2Q8IY33 904 aa8.99□□□□□ -0.97
ATP2A1-207ENST00000564470 EMP3P54852 163 aa8.95□□□□□ -0.98
ATP2A1-207ENST00000564470 ZNF710Q8N1W2 664 aa8.95□□□□□ -0.98
ATP2A1-207ENST00000564470 HOXB3P14651 431 aaPredicted RBP8.93□□□□□ -0.98
ATP2A1-207ENST00000564470 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
ATP2A1-207ENST00000564470 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
ATP2A1-207ENST00000564470 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
ATP2A1-207ENST00000564470 TMEM92Q6UXU6 159 aa8.92□□□□□ -0.98
ATP2A1-207ENST00000564470 FAM205CA6NFA0 338 aa8.91□□□□□ -0.98
ATP2A1-207ENST00000564470 RIMBP2O15034 1052 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms