RNA–Protein interactions for RNA: ENST00000564022.1

SCAPER-210, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-210ENST00000564022 HAX1O00165 279 aa11.97□□□□□ -0.49
SCAPER-210ENST00000564022 ECM2O94769 699 aaPredicted RBP11.96□□□□□ -0.49
SCAPER-210ENST00000564022 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
SCAPER-210ENST00000564022 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
SCAPER-210ENST00000564022 PYGBP11216 843 aa11.9□□□□□ -0.5
SCAPER-210ENST00000564022 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
SCAPER-210ENST00000564022 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
SCAPER-210ENST00000564022 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
SCAPER-210ENST00000564022 EVX2Q03828 476 aa11.83□□□□□ -0.52
SCAPER-210ENST00000564022 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
SCAPER-210ENST00000564022 RGL2O15211 777 aa11.82□□□□□ -0.52
SCAPER-210ENST00000564022 CHRM1P11229 460 aaPredicted RBP11.79□□□□□ -0.52
SCAPER-210ENST00000564022 ZNF579Q8NAF0 562 aaKnown RBP11.78□□□□□ -0.52
SCAPER-210ENST00000564022 MAP3K13O43283 966 aa11.76□□□□□ -0.53
SCAPER-210ENST00000564022 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
SCAPER-210ENST00000564022 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
SCAPER-210ENST00000564022 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
SCAPER-210ENST00000564022 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
SCAPER-210ENST00000564022 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
SCAPER-210ENST00000564022 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
SCAPER-210ENST00000564022 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
SCAPER-210ENST00000564022 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
SCAPER-210ENST00000564022 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
SCAPER-210ENST00000564022 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
SCAPER-210ENST00000564022 VGFO15240 615 aaPredicted RBP11.64□□□□□ -0.55
SCAPER-210ENST00000564022 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
SCAPER-210ENST00000564022 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
SCAPER-210ENST00000564022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
SCAPER-210ENST00000564022 GABBR2O75899 941 aa11.6□□□□□ -0.55
SCAPER-210ENST00000564022 PSEN1P49768 467 aa11.6□□□□□ -0.55
SCAPER-210ENST00000564022 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
SCAPER-210ENST00000564022 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
SCAPER-210ENST00000564022 STK25O00506 426 aa11.59□□□□□ -0.55
SCAPER-210ENST00000564022 CLCN6P51797 869 aa11.59□□□□□ -0.55
SCAPER-210ENST00000564022 TRPC6Q9Y210 931 aa11.59□□□□□ -0.55
SCAPER-210ENST00000564022 SP7Q8TDD2 431 aaPredicted RBP11.58□□□□□ -0.56
SCAPER-210ENST00000564022 STK24Q9Y6E0 443 aa11.56□□□□□ -0.56
SCAPER-210ENST00000564022 BCL11BQ9C0K0 894 aaPredicted RBP11.55□□□□□ -0.56
SCAPER-210ENST00000564022 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
SCAPER-210ENST00000564022 HS6ST3Q8IZP7 471 aa11.52□□□□□ -0.57
SCAPER-210ENST00000564022 TIE1P35590 1138 aa11.49□□□□□ -0.57
SCAPER-210ENST00000564022 DCBLD2Q96PD2 775 aa11.48□□□□□ -0.57
SCAPER-210ENST00000564022 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
SCAPER-210ENST00000564022 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
SCAPER-210ENST00000564022 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
SCAPER-210ENST00000564022 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
SCAPER-210ENST00000564022 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
SCAPER-210ENST00000564022 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
SCAPER-210ENST00000564022 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
SCAPER-210ENST00000564022 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
SCAPER-210ENST00000564022 EFCAB3Q8N7B9 438 aa11.41□□□□□ -0.58
SCAPER-210ENST00000564022 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
SCAPER-210ENST00000564022 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
SCAPER-210ENST00000564022 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
SCAPER-210ENST00000564022 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
SCAPER-210ENST00000564022 PAXIP1Q6ZW49 1069 aaPredicted RBP11.36□□□□□ -0.59
SCAPER-210ENST00000564022 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
SCAPER-210ENST00000564022 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
SCAPER-210ENST00000564022 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
SCAPER-210ENST00000564022 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
SCAPER-210ENST00000564022 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
SCAPER-210ENST00000564022 SOX12O15370 315 aa11.31□□□□□ -0.6
SCAPER-210ENST00000564022 PHF8Q9UPP1 1060 aa11.31□□□□□ -0.6
SCAPER-210ENST00000564022 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
SCAPER-210ENST00000564022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.65e-7■■□□□ 14.5
SCAPER-210ENST00000564022 NLRP6P59044 892 aa11.28□□□□□ -0.6
SCAPER-210ENST00000564022 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
SCAPER-210ENST00000564022 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
SCAPER-210ENST00000564022 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
SCAPER-210ENST00000564022 SEC24BO95487 1268 aa11.25□□□□□ -0.61
SCAPER-210ENST00000564022 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
SCAPER-210ENST00000564022 IER5LQ5T953 404 aa11.24□□□□□ -0.61
SCAPER-210ENST00000564022 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
SCAPER-210ENST00000564022 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
SCAPER-210ENST00000564022 C7P10643 843 aa11.22□□□□□ -0.61
SCAPER-210ENST00000564022 PLCG2P16885 1265 aa11.22□□□□□ -0.61
SCAPER-210ENST00000564022 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
SCAPER-210ENST00000564022 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
SCAPER-210ENST00000564022 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
SCAPER-210ENST00000564022 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
SCAPER-210ENST00000564022 COLQQ9Y215 455 aaPredicted RBP11.19□□□□□ -0.62
SCAPER-210ENST00000564022 PPP1R37O75864 691 aa11.18□□□□□ -0.62
SCAPER-210ENST00000564022 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
SCAPER-210ENST00000564022 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
SCAPER-210ENST00000564022 ILDR1Q86SU0 546 aaPredicted RBP11.15□□□□□ -0.62
SCAPER-210ENST00000564022 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
SCAPER-210ENST00000564022 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
SCAPER-210ENST00000564022 G3V3G9 751 aa11.11□□□□□ -0.63
SCAPER-210ENST00000564022 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
SCAPER-210ENST00000564022 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
SCAPER-210ENST00000564022 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
SCAPER-210ENST00000564022 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
SCAPER-210ENST00000564022 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
SCAPER-210ENST00000564022 POTEB2H3BUK9 544 aa11□□□□□ -0.65
SCAPER-210ENST00000564022 C3orf67Q6ZVT6 689 aa10.98□□□□□ -0.65
SCAPER-210ENST00000564022 TMEM121BQ9BXQ6 578 aaPredicted RBP10.97□□□□□ -0.65
SCAPER-210ENST00000564022 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
SCAPER-210ENST00000564022 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
SCAPER-210ENST00000564022 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
SCAPER-210ENST00000564022 KDM2AQ9Y2K7 1162 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms