RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
SCAPER-208ENST00000563688 PHF12Q96QT6 1004 aa13.63□□□□□ -0.23
SCAPER-208ENST00000563688 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
SCAPER-208ENST00000563688 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
SCAPER-208ENST00000563688 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
SCAPER-208ENST00000563688 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
SCAPER-208ENST00000563688 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
SCAPER-208ENST00000563688 MS4A3Q96HJ5 214 aa13.47□□□□□ -0.25
SCAPER-208ENST00000563688 MAP3K13O43283 966 aa13.46□□□□□ -0.25
SCAPER-208ENST00000563688 POTEIP0CG38 1075 aa13.46□□□□□ -0.25
SCAPER-208ENST00000563688 GSE1Q14687 1217 aa13.44□□□□□ -0.26
SCAPER-208ENST00000563688 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
SCAPER-208ENST00000563688 PYGBP11216 843 aa13.39□□□□□ -0.27
SCAPER-208ENST00000563688 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
SCAPER-208ENST00000563688 PCDHB13Q9Y5F0 798 aa13.36□□□□□ -0.27
SCAPER-208ENST00000563688 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
SCAPER-208ENST00000563688 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
SCAPER-208ENST00000563688 TRPC6Q9Y210 931 aa13.34□□□□□ -0.27
SCAPER-208ENST00000563688 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
SCAPER-208ENST00000563688 ASTLQ6HA08 431 aaPredicted RBP13.3□□□□□ -0.28
SCAPER-208ENST00000563688 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
SCAPER-208ENST00000563688 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
SCAPER-208ENST00000563688 TIE1P35590 1138 aa13.26□□□□□ -0.29
SCAPER-208ENST00000563688 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
SCAPER-208ENST00000563688 PCDHB8Q9UN66 801 aa13.25□□□□□ -0.29
SCAPER-208ENST00000563688 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
SCAPER-208ENST00000563688 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
SCAPER-208ENST00000563688 TTLL13PA6NNM8 815 aa13.2□□□□□ -0.3
SCAPER-208ENST00000563688 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
SCAPER-208ENST00000563688 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
SCAPER-208ENST00000563688 PKD2Q13563 968 aa13.12□□□□□ -0.31
SCAPER-208ENST00000563688 C7P10643 843 aa13.11□□□□□ -0.31
SCAPER-208ENST00000563688 SLC39A7Q92504 469 aa13.11□□□□□ -0.31
SCAPER-208ENST00000563688 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
SCAPER-208ENST00000563688 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
SCAPER-208ENST00000563688 PSEN1P49768 467 aa13.08□□□□□ -0.32
SCAPER-208ENST00000563688 LHX8Q68G74 356 aa13.08□□□□□ -0.32
SCAPER-208ENST00000563688 METRNQ9UJH8 293 aa13.08□□□□□ -0.32
SCAPER-208ENST00000563688 PDAP1Q13442 181 aaKnown RBP13.06□□□□□ -0.32
SCAPER-208ENST00000563688 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
SCAPER-208ENST00000563688 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
SCAPER-208ENST00000563688 ECM2O94769 699 aaPredicted RBP13.03□□□□□ -0.32
SCAPER-208ENST00000563688 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
SCAPER-208ENST00000563688 IER5LQ5T953 404 aa13.02□□□□□ -0.33
SCAPER-208ENST00000563688 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
SCAPER-208ENST00000563688 RGL2O15211 777 aa12.95□□□□□ -0.34
SCAPER-208ENST00000563688 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
SCAPER-208ENST00000563688 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
SCAPER-208ENST00000563688 POTEJP0CG39 1038 aa12.94□□□□□ -0.34
SCAPER-208ENST00000563688 SEC24BO95487 1268 aa12.93□□□□□ -0.34
SCAPER-208ENST00000563688 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.92□□□□□ -0.34
SCAPER-208ENST00000563688 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
SCAPER-208ENST00000563688 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
SCAPER-208ENST00000563688 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
SCAPER-208ENST00000563688 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
SCAPER-208ENST00000563688 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
SCAPER-208ENST00000563688 OTUD5Q96G74 571 aa12.87□□□□□ -0.35
SCAPER-208ENST00000563688 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
SCAPER-208ENST00000563688 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
SCAPER-208ENST00000563688 PLCG2P16885 1265 aa12.85□□□□□ -0.35
SCAPER-208ENST00000563688 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
SCAPER-208ENST00000563688 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
SCAPER-208ENST00000563688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.81□□□□□ -0.364e-7■■■□□ 18.1
SCAPER-208ENST00000563688 BCL11BQ9C0K0 894 aaPredicted RBP12.8□□□□□ -0.36
SCAPER-208ENST00000563688 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
SCAPER-208ENST00000563688 STK25O00506 426 aa12.77□□□□□ -0.37
SCAPER-208ENST00000563688 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
SCAPER-208ENST00000563688 SOX12O15370 315 aa12.74□□□□□ -0.37
SCAPER-208ENST00000563688 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
SCAPER-208ENST00000563688 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
SCAPER-208ENST00000563688 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
SCAPER-208ENST00000563688 PHF8Q9UPP1 1060 aa12.68□□□□□ -0.38
SCAPER-208ENST00000563688 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
SCAPER-208ENST00000563688 MS4A4AQ96JQ5 239 aa12.67□□□□□ -0.38
SCAPER-208ENST00000563688 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
SCAPER-208ENST00000563688 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
SCAPER-208ENST00000563688 MFRPQ9BY79 579 aa12.65□□□□□ -0.38
SCAPER-208ENST00000563688 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
SCAPER-208ENST00000563688 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
SCAPER-208ENST00000563688 NLRP6P59044 892 aa12.62□□□□□ -0.39
SCAPER-208ENST00000563688 BOLA1Q9Y3E2 137 aa12.61□□□□□ -0.39
SCAPER-208ENST00000563688 TMEM121BQ9BXQ6 578 aaPredicted RBP12.6□□□□□ -0.39
SCAPER-208ENST00000563688 DNAJC5Q9H3Z4 198 aa12.59□□□□□ -0.39
SCAPER-208ENST00000563688 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
SCAPER-208ENST00000563688 SLAIN1Q8ND83 568 aa12.57□□□□□ -0.4
SCAPER-208ENST00000563688 C3orf67Q6ZVT6 689 aa12.54□□□□□ -0.4
SCAPER-208ENST00000563688 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
SCAPER-208ENST00000563688 MICALL2Q8IY33 904 aa12.53□□□□□ -0.4
SCAPER-208ENST00000563688 G3V3G9 751 aa12.52□□□□□ -0.41
SCAPER-208ENST00000563688 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
SCAPER-208ENST00000563688 PPP1R37O75864 691 aa12.47□□□□□ -0.41
SCAPER-208ENST00000563688 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
SCAPER-208ENST00000563688 TMEM92Q6UXU6 159 aa12.43□□□□□ -0.42
SCAPER-208ENST00000563688 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
SCAPER-208ENST00000563688 GTPBP6O43824 516 aaPredicted RBP12.38□□□□□ -0.43
SCAPER-208ENST00000563688 SNPHO15079 494 aa12.36□□□□□ -0.43
SCAPER-208ENST00000563688 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
SCAPER-208ENST00000563688 ST18O60284 1047 aa12.33□□□□□ -0.44
SCAPER-208ENST00000563688 KIF3CO14782 793 aa12.32□□□□□ -0.44
SCAPER-208ENST00000563688 BBXQ8WY36 941 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms