RNA–Protein interactions for RNA: ENST00000563253.5

NAE1-211, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-211ENST00000563253 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
NAE1-211ENST00000563253 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
NAE1-211ENST00000563253 CLCN6P51797 869 aa12.96□□□□□ -0.33
NAE1-211ENST00000563253 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
NAE1-211ENST00000563253 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
NAE1-211ENST00000563253 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
NAE1-211ENST00000563253 GSE1Q14687 1217 aa12.85□□□□□ -0.35
NAE1-211ENST00000563253 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
NAE1-211ENST00000563253 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
NAE1-211ENST00000563253 MAP3K13O43283 966 aa12.8□□□□□ -0.36
NAE1-211ENST00000563253 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
NAE1-211ENST00000563253 PYGBP11216 843 aa12.77□□□□□ -0.37
NAE1-211ENST00000563253 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
NAE1-211ENST00000563253 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
NAE1-211ENST00000563253 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
NAE1-211ENST00000563253 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
NAE1-211ENST00000563253 CHRM1P11229 460 aaPredicted RBP12.7□□□□□ -0.38
NAE1-211ENST00000563253 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
NAE1-211ENST00000563253 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
NAE1-211ENST00000563253 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
NAE1-211ENST00000563253 TIE1P35590 1138 aa12.62□□□□□ -0.39
NAE1-211ENST00000563253 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
NAE1-211ENST00000563253 PCDHB8Q9UN66 801 aa12.62□□□□□ -0.39
NAE1-211ENST00000563253 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
NAE1-211ENST00000563253 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
NAE1-211ENST00000563253 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
NAE1-211ENST00000563253 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
NAE1-211ENST00000563253 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
NAE1-211ENST00000563253 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
NAE1-211ENST00000563253 PKD2Q13563 968 aa12.54□□□□□ -0.4
NAE1-211ENST00000563253 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
NAE1-211ENST00000563253 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
NAE1-211ENST00000563253 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
NAE1-211ENST00000563253 PDAP1Q13442 181 aaKnown RBP12.48□□□□□ -0.41
NAE1-211ENST00000563253 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
NAE1-211ENST00000563253 PSEN1P49768 467 aa12.47□□□□□ -0.41
NAE1-211ENST00000563253 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
NAE1-211ENST00000563253 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.41
NAE1-211ENST00000563253 C7P10643 843 aa12.44□□□□□ -0.42
NAE1-211ENST00000563253 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
NAE1-211ENST00000563253 RGL2O15211 777 aa12.39□□□□□ -0.43
NAE1-211ENST00000563253 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
NAE1-211ENST00000563253 IER5LQ5T953 404 aa12.39□□□□□ -0.43
NAE1-211ENST00000563253 LHX8Q68G74 356 aa12.37□□□□□ -0.43
NAE1-211ENST00000563253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
NAE1-211ENST00000563253 GOLGA2Q08379 1002 aa12.35□□□□□ -0.43
NAE1-211ENST00000563253 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
NAE1-211ENST00000563253 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
NAE1-211ENST00000563253 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
NAE1-211ENST00000563253 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
NAE1-211ENST00000563253 SEC24BO95487 1268 aa12.32□□□□□ -0.44
NAE1-211ENST00000563253 COLQQ9Y215 455 aaPredicted RBP12.32□□□□□ -0.44
NAE1-211ENST00000563253 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
NAE1-211ENST00000563253 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
NAE1-211ENST00000563253 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
NAE1-211ENST00000563253 PLCG2P16885 1265 aa12.27□□□□□ -0.45
NAE1-211ENST00000563253 BCL11BQ9C0K0 894 aaPredicted RBP12.25□□□□□ -0.45
NAE1-211ENST00000563253 OCEL1Q9H607 264 aa12.25□□□□□ -0.45
NAE1-211ENST00000563253 STK25O00506 426 aa12.24□□□□□ -0.45
NAE1-211ENST00000563253 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
NAE1-211ENST00000563253 EFCAB3Q8N7B9 438 aa12.23□□□□□ -0.45
NAE1-211ENST00000563253 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
NAE1-211ENST00000563253 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
NAE1-211ENST00000563253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.453e-7■■■□□ 17
NAE1-211ENST00000563253 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
NAE1-211ENST00000563253 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
NAE1-211ENST00000563253 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
NAE1-211ENST00000563253 SOX12O15370 315 aa12.16□□□□□ -0.46
NAE1-211ENST00000563253 OTUD5Q96G74 571 aa12.16□□□□□ -0.46
NAE1-211ENST00000563253 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
NAE1-211ENST00000563253 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
NAE1-211ENST00000563253 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
NAE1-211ENST00000563253 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
NAE1-211ENST00000563253 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
NAE1-211ENST00000563253 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
NAE1-211ENST00000563253 DCAF8L2P0C7V8 631 aa12.09□□□□□ -0.47
NAE1-211ENST00000563253 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
NAE1-211ENST00000563253 NLRP6P59044 892 aa12.07□□□□□ -0.48
NAE1-211ENST00000563253 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
NAE1-211ENST00000563253 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
NAE1-211ENST00000563253 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
NAE1-211ENST00000563253 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
NAE1-211ENST00000563253 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.49
NAE1-211ENST00000563253 G3V3G9 751 aa12□□□□□ -0.49
NAE1-211ENST00000563253 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
NAE1-211ENST00000563253 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
NAE1-211ENST00000563253 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
NAE1-211ENST00000563253 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
NAE1-211ENST00000563253 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
NAE1-211ENST00000563253 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
NAE1-211ENST00000563253 PPP1R37O75864 691 aa11.88□□□□□ -0.51
NAE1-211ENST00000563253 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
NAE1-211ENST00000563253 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
NAE1-211ENST00000563253 TMEM92Q6UXU6 159 aa11.82□□□□□ -0.52
NAE1-211ENST00000563253 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
NAE1-211ENST00000563253 SNPHO15079 494 aa11.77□□□□□ -0.53
NAE1-211ENST00000563253 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
NAE1-211ENST00000563253 LCE2DQ5TA82 110 aaPredicted RBP11.73□□□□□ -0.53
NAE1-211ENST00000563253 KIF3CO14782 793 aa11.72□□□□□ -0.53
NAE1-211ENST00000563253 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms