RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
KARS-203ENST00000562875 RGL2O15211 777 aa14.59□□□□□ -0.07
KARS-203ENST00000562875 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
KARS-203ENST00000562875 PYGBP11216 843 aa14.46□□□□□ -0.09
KARS-203ENST00000562875 CHRM1P11229 460 aaPredicted RBP14.44□□□□□ -0.1
KARS-203ENST00000562875 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
KARS-203ENST00000562875 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
KARS-203ENST00000562875 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
KARS-203ENST00000562875 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
KARS-203ENST00000562875 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
KARS-203ENST00000562875 CHGAP10645 457 aaKnown RBP14.34□□□□□ -0.11
KARS-203ENST00000562875 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
KARS-203ENST00000562875 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
KARS-203ENST00000562875 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
KARS-203ENST00000562875 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
KARS-203ENST00000562875 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
KARS-203ENST00000562875 C19orf67A6NJJ6 358 aa14.26□□□□□ -0.13
KARS-203ENST00000562875 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
KARS-203ENST00000562875 HS6ST3Q8IZP7 471 aa14.26□□□□□ -0.13
KARS-203ENST00000562875 PLCB2Q00722 1185 aa14.24□□□□□ -0.13
KARS-203ENST00000562875 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.24□□□□□ -0.13
KARS-203ENST00000562875 KIF12Q96FN5 646 aa14.23□□□□□ -0.13
KARS-203ENST00000562875 PHF12Q96QT6 1004 aa14.22□□□□□ -0.13
KARS-203ENST00000562875 PCDHB8Q9UN66 801 aa14.22□□□□□ -0.13
KARS-203ENST00000562875 PCDHB13Q9Y5F0 798 aa14.22□□□□□ -0.13
KARS-203ENST00000562875 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
KARS-203ENST00000562875 STK25O00506 426 aa14.21□□□□□ -0.13
KARS-203ENST00000562875 MAP3K13O43283 966 aa14.21□□□□□ -0.13
KARS-203ENST00000562875 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
KARS-203ENST00000562875 ZNF579Q8NAF0 562 aaKnown RBP14.2□□□□□ -0.14
KARS-203ENST00000562875 SGIP1Q9BQI5 828 aa14.2□□□□□ -0.14
KARS-203ENST00000562875 HAX1O00165 279 aa14.17□□□□□ -0.14
KARS-203ENST00000562875 IFNL1Q8IU54 200 aa14.16□□□□□ -0.14
KARS-203ENST00000562875 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
KARS-203ENST00000562875 PDAP1Q13442 181 aaKnown RBP14.15□□□□□ -0.14
KARS-203ENST00000562875 STK24Q9Y6E0 443 aa14.15□□□□□ -0.14
KARS-203ENST00000562875 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
KARS-203ENST00000562875 CFAP44Q96MT7 982 aa14.12□□□□□ -0.15
KARS-203ENST00000562875 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
KARS-203ENST00000562875 PSEN1P49768 467 aa14.11□□□□□ -0.15
KARS-203ENST00000562875 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
KARS-203ENST00000562875 SPRYD3Q8NCJ5 442 aa14.09□□□□□ -0.15
KARS-203ENST00000562875 HAP1P54257 671 aaPredicted RBP14.06□□□□□ -0.16
KARS-203ENST00000562875 EVX2Q03828 476 aa14.06□□□□□ -0.16
KARS-203ENST00000562875 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
KARS-203ENST00000562875 MS4A3Q96HJ5 214 aa14.05□□□□□ -0.16
KARS-203ENST00000562875 TRPC6Q9Y210 931 aa13.97□□□□□ -0.17
KARS-203ENST00000562875 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
KARS-203ENST00000562875 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
KARS-203ENST00000562875 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
KARS-203ENST00000562875 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
KARS-203ENST00000562875 CLCN6P51797 869 aa13.91□□□□□ -0.18
KARS-203ENST00000562875 RYDENQ9NUL5 291 aaKnown RBP13.9□□□□□ -0.18
KARS-203ENST00000562875 EFCAB3Q8N7B9 438 aa13.89□□□□□ -0.19
KARS-203ENST00000562875 TIE1P35590 1138 aa13.88□□□□□ -0.19
KARS-203ENST00000562875 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
KARS-203ENST00000562875 GOLGA2Q08379 1002 aa13.85□□□□□ -0.19
KARS-203ENST00000562875 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
KARS-203ENST00000562875 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
KARS-203ENST00000562875 BMP2KQ9NSY1 1161 aaPredicted RBP13.84□□□□□ -0.19
KARS-203ENST00000562875 SOX12O15370 315 aa13.82□□□□□ -0.2
KARS-203ENST00000562875 GABBR2O75899 941 aa13.81□□□□□ -0.2
KARS-203ENST00000562875 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
KARS-203ENST00000562875 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
KARS-203ENST00000562875 NLRP6P59044 892 aa13.78□□□□□ -0.2
KARS-203ENST00000562875 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
KARS-203ENST00000562875 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
KARS-203ENST00000562875 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
KARS-203ENST00000562875 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
KARS-203ENST00000562875 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
KARS-203ENST00000562875 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
KARS-203ENST00000562875 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
KARS-203ENST00000562875 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
KARS-203ENST00000562875 PPP1R37O75864 691 aa13.68□□□□□ -0.22
KARS-203ENST00000562875 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
KARS-203ENST00000562875 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
KARS-203ENST00000562875 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
KARS-203ENST00000562875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.223e-7■■■■□ 20.5
KARS-203ENST00000562875 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
KARS-203ENST00000562875 ILDR1Q86SU0 546 aaPredicted RBP13.6□□□□□ -0.23
KARS-203ENST00000562875 IER5LQ5T953 404 aa13.59□□□□□ -0.23
KARS-203ENST00000562875 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
KARS-203ENST00000562875 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
KARS-203ENST00000562875 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
KARS-203ENST00000562875 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
KARS-203ENST00000562875 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
KARS-203ENST00000562875 OCEL1Q9H607 264 aa13.53□□□□□ -0.24
KARS-203ENST00000562875 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
KARS-203ENST00000562875 PLCG2P16885 1265 aa13.51□□□□□ -0.25
KARS-203ENST00000562875 SLC39A7Q92504 469 aa13.49□□□□□ -0.25
KARS-203ENST00000562875 SEC24BO95487 1268 aa13.48□□□□□ -0.25
KARS-203ENST00000562875 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
KARS-203ENST00000562875 C7P10643 843 aa13.45□□□□□ -0.26
KARS-203ENST00000562875 WDR70Q9NW82 654 aa13.45□□□□□ -0.26
KARS-203ENST00000562875 COLQQ9Y215 455 aaPredicted RBP13.45□□□□□ -0.26
KARS-203ENST00000562875 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
KARS-203ENST00000562875 MICALL2Q8IY33 904 aa13.43□□□□□ -0.26
KARS-203ENST00000562875 G3V3G9 751 aa13.41□□□□□ -0.26
KARS-203ENST00000562875 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
KARS-203ENST00000562875 BCANQ96GW7 911 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms