RNA–Protein interactions for RNA: ENST00000562847.5

TCF4-217, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-217ENST00000562847 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
TCF4-217ENST00000562847 DCAF8Q5TAQ9 597 aa12.37□□□□□ -0.43
TCF4-217ENST00000562847 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
TCF4-217ENST00000562847 CIZ1Q9ULV3 898 aaPredicted RBP12.32□□□□□ -0.44
TCF4-217ENST00000562847 GSE1Q14687 1217 aa12.3□□□□□ -0.44
TCF4-217ENST00000562847 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
TCF4-217ENST00000562847 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
TCF4-217ENST00000562847 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
TCF4-217ENST00000562847 PYGBP11216 843 aa12.18□□□□□ -0.46
TCF4-217ENST00000562847 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
TCF4-217ENST00000562847 KIF12Q96FN5 646 aa12.14□□□□□ -0.47
TCF4-217ENST00000562847 MAP3K13O43283 966 aa12.13□□□□□ -0.47
TCF4-217ENST00000562847 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
TCF4-217ENST00000562847 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
TCF4-217ENST00000562847 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
TCF4-217ENST00000562847 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
TCF4-217ENST00000562847 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
TCF4-217ENST00000562847 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
TCF4-217ENST00000562847 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
TCF4-217ENST00000562847 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
TCF4-217ENST00000562847 IFNL1Q8IU54 200 aa12.02□□□□□ -0.49
TCF4-217ENST00000562847 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
TCF4-217ENST00000562847 LHX8Q68G74 356 aa12□□□□□ -0.49
TCF4-217ENST00000562847 PKD2Q13563 968 aa11.98□□□□□ -0.49
TCF4-217ENST00000562847 ASTLQ6HA08 431 aaPredicted RBP11.95□□□□□ -0.5
TCF4-217ENST00000562847 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
TCF4-217ENST00000562847 TIE1P35590 1138 aa11.93□□□□□ -0.5
TCF4-217ENST00000562847 RIOK3O14730 519 aaKnown RBP11.92□□□□□ -0.5
TCF4-217ENST00000562847 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
TCF4-217ENST00000562847 AMER1Q5JTC6 1135 aaPredicted RBP11.92□□□□□ -0.5
TCF4-217ENST00000562847 TMEM106CQ9BVX2 250 aa11.91□□□□□ -0.5
TCF4-217ENST00000562847 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
TCF4-217ENST00000562847 PSEN1P49768 467 aa11.9□□□□□ -0.5
TCF4-217ENST00000562847 PDAP1Q13442 181 aaKnown RBP11.9□□□□□ -0.5
TCF4-217ENST00000562847 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
TCF4-217ENST00000562847 TTLL13PA6NNM8 815 aa11.87□□□□□ -0.51
TCF4-217ENST00000562847 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
TCF4-217ENST00000562847 SLC39A7Q92504 469 aa11.87□□□□□ -0.51
TCF4-217ENST00000562847 RGL2O15211 777 aa11.86□□□□□ -0.51
TCF4-217ENST00000562847 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
TCF4-217ENST00000562847 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
TCF4-217ENST00000562847 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
TCF4-217ENST00000562847 C7P10643 843 aa11.85□□□□□ -0.51
TCF4-217ENST00000562847 ATN1P54259 1190 aaPredicted RBP11.85□□□□□ -0.51
TCF4-217ENST00000562847 DCAF8L2P0C7V8 631 aa11.84□□□□□ -0.51
TCF4-217ENST00000562847 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
TCF4-217ENST00000562847 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
TCF4-217ENST00000562847 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
TCF4-217ENST00000562847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
TCF4-217ENST00000562847 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
TCF4-217ENST00000562847 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
TCF4-217ENST00000562847 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
TCF4-217ENST00000562847 STK25O00506 426 aa11.76□□□□□ -0.53
TCF4-217ENST00000562847 SEC24BO95487 1268 aa11.75□□□□□ -0.53
TCF4-217ENST00000562847 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
TCF4-217ENST00000562847 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
TCF4-217ENST00000562847 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
TCF4-217ENST00000562847 IER5LQ5T953 404 aa11.71□□□□□ -0.53
TCF4-217ENST00000562847 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
TCF4-217ENST00000562847 PLCG2P16885 1265 aa11.68□□□□□ -0.54
TCF4-217ENST00000562847 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
TCF4-217ENST00000562847 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
TCF4-217ENST00000562847 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
TCF4-217ENST00000562847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.54
TCF4-217ENST00000562847 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
TCF4-217ENST00000562847 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
TCF4-217ENST00000562847 HS6ST3Q8IZP7 471 aa11.61□□□□□ -0.55
TCF4-217ENST00000562847 SCUBE2Q9NQ36 999 aa11.61□□□□□ -0.55
TCF4-217ENST00000562847 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
TCF4-217ENST00000562847 SOX12O15370 315 aa11.59□□□□□ -0.55
TCF4-217ENST00000562847 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
TCF4-217ENST00000562847 POTEJP0CG39 1038 aa11.57□□□□□ -0.56
TCF4-217ENST00000562847 G3V3G9 751 aa11.55□□□□□ -0.56
TCF4-217ENST00000562847 NLRP6P59044 892 aa11.54□□□□□ -0.56
TCF4-217ENST00000562847 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
TCF4-217ENST00000562847 PDCD7Q8N8D1 485 aaKnown RBP11.51□□□□□ -0.57
TCF4-217ENST00000562847 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
TCF4-217ENST00000562847 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
TCF4-217ENST00000562847 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
TCF4-217ENST00000562847 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
TCF4-217ENST00000562847 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
TCF4-217ENST00000562847 C3orf67Q6ZVT6 689 aa11.44□□□□□ -0.58
TCF4-217ENST00000562847 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
TCF4-217ENST00000562847 BOLA1Q9Y3E2 137 aa11.43□□□□□ -0.58
TCF4-217ENST00000562847 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
TCF4-217ENST00000562847 DNAJC5Q9H3Z4 198 aa11.42□□□□□ -0.58
TCF4-217ENST00000562847 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
TCF4-217ENST00000562847 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
TCF4-217ENST00000562847 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.41□□□□□ -0.58
TCF4-217ENST00000562847 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
TCF4-217ENST00000562847 SLAIN1Q8ND83 568 aa11.37□□□□□ -0.59
TCF4-217ENST00000562847 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
TCF4-217ENST00000562847 PPP1R37O75864 691 aa11.31□□□□□ -0.6
TCF4-217ENST00000562847 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
TCF4-217ENST00000562847 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
TCF4-217ENST00000562847 SPRYD3Q8NCJ5 442 aa11.3□□□□□ -0.6
TCF4-217ENST00000562847 CFAP44Q96MT7 982 aa11.3□□□□□ -0.6
TCF4-217ENST00000562847 PAXIP1Q6ZW49 1069 aaPredicted RBP11.29□□□□□ -0.6
TCF4-217ENST00000562847 TMEM121BQ9BXQ6 578 aaPredicted RBP11.28□□□□□ -0.6
TCF4-217ENST00000562847 POTEMA6NI47 508 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms