RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
CHD9-206ENST00000562791 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
CHD9-206ENST00000562791 CLCN6P51797 869 aa14.33□□□□□ -0.12
CHD9-206ENST00000562791 POTEIP0CG38 1075 aa14.28□□□□□ -0.12
CHD9-206ENST00000562791 FAM212AQ96EL1 285 aa14.28□□□□□ -0.12
CHD9-206ENST00000562791 MS4A3Q96HJ5 214 aa14.28□□□□□ -0.12
CHD9-206ENST00000562791 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
CHD9-206ENST00000562791 MAP3K13O43283 966 aa14.21□□□□□ -0.13
CHD9-206ENST00000562791 DCAF8Q5TAQ9 597 aa14.2□□□□□ -0.14
CHD9-206ENST00000562791 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
CHD9-206ENST00000562791 DCBLD2Q96PD2 775 aa14.18□□□□□ -0.14
CHD9-206ENST00000562791 TRPC6Q9Y210 931 aa14.15□□□□□ -0.14
CHD9-206ENST00000562791 PYGBP11216 843 aa14.13□□□□□ -0.15
CHD9-206ENST00000562791 GSE1Q14687 1217 aa14.1□□□□□ -0.15
CHD9-206ENST00000562791 PCDHB13Q9Y5F0 798 aa14.1□□□□□ -0.15
CHD9-206ENST00000562791 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
CHD9-206ENST00000562791 SGIP1Q9BQI5 828 aa14.06□□□□□ -0.16
CHD9-206ENST00000562791 ATMINO43313 823 aaPredicted RBP14.05□□□□□ -0.16
CHD9-206ENST00000562791 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
CHD9-206ENST00000562791 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
CHD9-206ENST00000562791 CIZ1Q9ULV3 898 aaPredicted RBP14.05□□□□□ -0.16
CHD9-206ENST00000562791 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
CHD9-206ENST00000562791 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
CHD9-206ENST00000562791 TIE1P35590 1138 aa13.99□□□□□ -0.17
CHD9-206ENST00000562791 PCDHB8Q9UN66 801 aa13.98□□□□□ -0.17
CHD9-206ENST00000562791 TTLL13PA6NNM8 815 aa13.96□□□□□ -0.17
CHD9-206ENST00000562791 CHRM1P11229 460 aaPredicted RBP13.95□□□□□ -0.18
CHD9-206ENST00000562791 LHX8Q68G74 356 aa13.89□□□□□ -0.19
CHD9-206ENST00000562791 TMEM106CQ9BVX2 250 aa13.89□□□□□ -0.19
CHD9-206ENST00000562791 ZNF467Q7Z7K2 595 aaPredicted RBP13.88□□□□□ -0.19
CHD9-206ENST00000562791 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
CHD9-206ENST00000562791 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
CHD9-206ENST00000562791 SLC39A7Q92504 469 aa13.86□□□□□ -0.19
CHD9-206ENST00000562791 POTEB2H3BUK9 544 aa13.84□□□□□ -0.19
CHD9-206ENST00000562791 C7P10643 843 aa13.82□□□□□ -0.2
CHD9-206ENST00000562791 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
CHD9-206ENST00000562791 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
CHD9-206ENST00000562791 RNF25Q96BH1 459 aaPredicted RBP13.79□□□□□ -0.2
CHD9-206ENST00000562791 PSEN1P49768 467 aa13.78□□□□□ -0.2
CHD9-206ENST00000562791 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
CHD9-206ENST00000562791 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
CHD9-206ENST00000562791 PKD2Q13563 968 aa13.74□□□□□ -0.21
CHD9-206ENST00000562791 IER5LQ5T953 404 aa13.72□□□□□ -0.21
CHD9-206ENST00000562791 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
CHD9-206ENST00000562791 RIOK3O14730 519 aaKnown RBP13.68□□□□□ -0.22
CHD9-206ENST00000562791 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
CHD9-206ENST00000562791 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
CHD9-206ENST00000562791 SEC24BO95487 1268 aa13.66□□□□□ -0.22
CHD9-206ENST00000562791 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
CHD9-206ENST00000562791 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
CHD9-206ENST00000562791 RGL2O15211 777 aa13.61□□□□□ -0.23
CHD9-206ENST00000562791 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
CHD9-206ENST00000562791 PLCG2P16885 1265 aa13.6□□□□□ -0.23
CHD9-206ENST00000562791 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
CHD9-206ENST00000562791 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
CHD9-206ENST00000562791 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
CHD9-206ENST00000562791 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
CHD9-206ENST00000562791 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
CHD9-206ENST00000562791 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
CHD9-206ENST00000562791 EFCAB3Q8N7B9 438 aa13.52□□□□□ -0.25
CHD9-206ENST00000562791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.251e-8■■■■■ 29.2
CHD9-206ENST00000562791 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
CHD9-206ENST00000562791 MAMSTRQ6ZN01 415 aa13.48□□□□□ -0.25
CHD9-206ENST00000562791 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
CHD9-206ENST00000562791 SCUBE2Q9NQ36 999 aa13.48□□□□□ -0.25
CHD9-206ENST00000562791 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
CHD9-206ENST00000562791 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
CHD9-206ENST00000562791 STK24Q9Y6E0 443 aa13.44□□□□□ -0.26
CHD9-206ENST00000562791 STK25O00506 426 aa13.43□□□□□ -0.26
CHD9-206ENST00000562791 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
CHD9-206ENST00000562791 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
CHD9-206ENST00000562791 SOX12O15370 315 aa13.35□□□□□ -0.27
CHD9-206ENST00000562791 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
CHD9-206ENST00000562791 SLAIN1Q8ND83 568 aa13.32□□□□□ -0.28
CHD9-206ENST00000562791 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
CHD9-206ENST00000562791 MFRPQ9BY79 579 aa13.31□□□□□ -0.28
CHD9-206ENST00000562791 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
CHD9-206ENST00000562791 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
CHD9-206ENST00000562791 C3orf67Q6ZVT6 689 aa13.28□□□□□ -0.28
CHD9-206ENST00000562791 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
CHD9-206ENST00000562791 NLRP6P59044 892 aa13.26□□□□□ -0.29
CHD9-206ENST00000562791 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
CHD9-206ENST00000562791 TMEM121BQ9BXQ6 578 aaPredicted RBP13.24□□□□□ -0.29
CHD9-206ENST00000562791 LCE2DQ5TA82 110 aaPredicted RBP13.23□□□□□ -0.29
CHD9-206ENST00000562791 G3V3G9 751 aa13.22□□□□□ -0.29
CHD9-206ENST00000562791 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
CHD9-206ENST00000562791 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
CHD9-206ENST00000562791 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
CHD9-206ENST00000562791 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
CHD9-206ENST00000562791 DCAF8L2P0C7V8 631 aa13.15□□□□□ -0.3
CHD9-206ENST00000562791 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
CHD9-206ENST00000562791 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
CHD9-206ENST00000562791 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
CHD9-206ENST00000562791 PPP1R37O75864 691 aa13.12□□□□□ -0.31
CHD9-206ENST00000562791 POTEMA6NI47 508 aa13.07□□□□□ -0.32
CHD9-206ENST00000562791 ST18O60284 1047 aa13.07□□□□□ -0.32
CHD9-206ENST00000562791 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
CHD9-206ENST00000562791 SNPHO15079 494 aa13.02□□□□□ -0.33
CHD9-206ENST00000562791 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
CHD9-206ENST00000562791 KIF3CO14782 793 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 210.4 ms