RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
CHD9-205ENST00000562785 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHD9-205ENST00000562785 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
CHD9-205ENST00000562785 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
CHD9-205ENST00000562785 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
CHD9-205ENST00000562785 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
CHD9-205ENST00000562785 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
CHD9-205ENST00000562785 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
CHD9-205ENST00000562785 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
CHD9-205ENST00000562785 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
CHD9-205ENST00000562785 PAXIP1Q6ZW49 1069 aaPredicted RBP13.48□□□□□ -0.25
CHD9-205ENST00000562785 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
CHD9-205ENST00000562785 PYGBP11216 843 aa13.46□□□□□ -0.25
CHD9-205ENST00000562785 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
CHD9-205ENST00000562785 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
CHD9-205ENST00000562785 SPRYD3Q8NCJ5 442 aa13.43□□□□□ -0.26
CHD9-205ENST00000562785 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
CHD9-205ENST00000562785 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
CHD9-205ENST00000562785 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
CHD9-205ENST00000562785 STK25O00506 426 aa13.37□□□□□ -0.27
CHD9-205ENST00000562785 VSIG10Q8N0Z9 540 aa13.37□□□□□ -0.27
CHD9-205ENST00000562785 CCDC61Q9Y6R9 512 aa13.37□□□□□ -0.27
CHD9-205ENST00000562785 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.34□□□□□ -0.27
CHD9-205ENST00000562785 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
CHD9-205ENST00000562785 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
CHD9-205ENST00000562785 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
CHD9-205ENST00000562785 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
CHD9-205ENST00000562785 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
CHD9-205ENST00000562785 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
CHD9-205ENST00000562785 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
CHD9-205ENST00000562785 TSHZ2Q9NRE2 1034 aa13.25□□□□□ -0.29
CHD9-205ENST00000562785 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
CHD9-205ENST00000562785 PDAP1Q13442 181 aaKnown RBP13.24□□□□□ -0.29
CHD9-205ENST00000562785 PCDHB8Q9UN66 801 aa13.23□□□□□ -0.29
CHD9-205ENST00000562785 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
CHD9-205ENST00000562785 PCDHB13Q9Y5F0 798 aa13.23□□□□□ -0.29
CHD9-205ENST00000562785 KIF12Q96FN5 646 aa13.2□□□□□ -0.3
CHD9-205ENST00000562785 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
CHD9-205ENST00000562785 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
CHD9-205ENST00000562785 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
CHD9-205ENST00000562785 MAP3K13O43283 966 aa13.16□□□□□ -0.3
CHD9-205ENST00000562785 PSEN1P49768 467 aa13.16□□□□□ -0.3
CHD9-205ENST00000562785 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
CHD9-205ENST00000562785 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
CHD9-205ENST00000562785 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
CHD9-205ENST00000562785 BCANQ96GW7 911 aa13.07□□□□□ -0.32
CHD9-205ENST00000562785 MFRPQ9BY79 579 aa13.01□□□□□ -0.33
CHD9-205ENST00000562785 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
CHD9-205ENST00000562785 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
CHD9-205ENST00000562785 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
CHD9-205ENST00000562785 SOX12O15370 315 aa12.94□□□□□ -0.34
CHD9-205ENST00000562785 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
CHD9-205ENST00000562785 NLRP6P59044 892 aa12.92□□□□□ -0.34
CHD9-205ENST00000562785 TRPC6Q9Y210 931 aa12.91□□□□□ -0.34
CHD9-205ENST00000562785 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
CHD9-205ENST00000562785 POTEHQ6S545 545 aa12.89□□□□□ -0.35
CHD9-205ENST00000562785 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
CHD9-205ENST00000562785 TIE1P35590 1138 aa12.86□□□□□ -0.35
CHD9-205ENST00000562785 CADPS2Q86UW7 1296 aa12.85□□□□□ -0.35
CHD9-205ENST00000562785 HAX1O00165 279 aa12.84□□□□□ -0.35
CHD9-205ENST00000562785 PPP1R37O75864 691 aa12.84□□□□□ -0.35
CHD9-205ENST00000562785 GOLGA2Q08379 1002 aa12.83□□□□□ -0.36
CHD9-205ENST00000562785 CLCN6P51797 869 aa12.82□□□□□ -0.36
CHD9-205ENST00000562785 TTLL13PA6NNM8 815 aa12.81□□□□□ -0.36
CHD9-205ENST00000562785 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
CHD9-205ENST00000562785 EVX2Q03828 476 aa12.8□□□□□ -0.36
CHD9-205ENST00000562785 MS4A4AQ96JQ5 239 aa12.8□□□□□ -0.36
CHD9-205ENST00000562785 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
CHD9-205ENST00000562785 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
CHD9-205ENST00000562785 NBR1Q14596 966 aa12.78□□□□□ -0.36
CHD9-205ENST00000562785 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
CHD9-205ENST00000562785 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
CHD9-205ENST00000562785 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
CHD9-205ENST00000562785 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
CHD9-205ENST00000562785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHD9-205ENST00000562785 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
CHD9-205ENST00000562785 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
CHD9-205ENST00000562785 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
CHD9-205ENST00000562785 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
CHD9-205ENST00000562785 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
CHD9-205ENST00000562785 PRKCSHP14314 528 aaPredicted RBP12.63□□□□□ -0.39
CHD9-205ENST00000562785 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
CHD9-205ENST00000562785 PDE4AP27815 886 aa12.6□□□□□ -0.39
CHD9-205ENST00000562785 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
CHD9-205ENST00000562785 GABBR2O75899 941 aa12.59□□□□□ -0.39
CHD9-205ENST00000562785 MFSD10Q14728 455 aa12.59□□□□□ -0.39
CHD9-205ENST00000562785 IER5LQ5T953 404 aa12.59□□□□□ -0.39
CHD9-205ENST00000562785 E2F4Q16254 413 aa12.58□□□□□ -0.4
CHD9-205ENST00000562785 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
CHD9-205ENST00000562785 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
CHD9-205ENST00000562785 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
CHD9-205ENST00000562785 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
CHD9-205ENST00000562785 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
CHD9-205ENST00000562785 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
CHD9-205ENST00000562785 OCEL1Q9H607 264 aa12.53□□□□□ -0.4
CHD9-205ENST00000562785 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
CHD9-205ENST00000562785 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
CHD9-205ENST00000562785 CAMK2BQ13554 666 aa12.47□□□□□ -0.41
CHD9-205ENST00000562785 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
CHD9-205ENST00000562785 PLCG2P16885 1265 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms