RNA–Protein interactions for RNA: ENST00000562571.1

LRRC9-204, Transcript of leucine rich repeat containing 9, humanhuman

TSL 3

Gene LRRC9, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-204ENST00000562571 LHX8Q68G74 356 aa14.53□□□□□ -0.08
LRRC9-204ENST00000562571 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
LRRC9-204ENST00000562571 MS4A3Q96HJ5 214 aa14.46□□□□□ -0.09
LRRC9-204ENST00000562571 NUBP1P53384 320 aa14.44□□□□□ -0.1
LRRC9-204ENST00000562571 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
LRRC9-204ENST00000562571 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
LRRC9-204ENST00000562571 FAM212AQ96EL1 285 aa14.36□□□□□ -0.11
LRRC9-204ENST00000562571 MAP3K13O43283 966 aa14.34□□□□□ -0.11
LRRC9-204ENST00000562571 ATMINO43313 823 aaPredicted RBP14.34□□□□□ -0.11
LRRC9-204ENST00000562571 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
LRRC9-204ENST00000562571 SGIP1Q9BQI5 828 aa14.34□□□□□ -0.11
LRRC9-204ENST00000562571 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
LRRC9-204ENST00000562571 SLC39A7Q92504 469 aa14.28□□□□□ -0.12
LRRC9-204ENST00000562571 TIE1P35590 1138 aa14.27□□□□□ -0.13
LRRC9-204ENST00000562571 C7P10643 843 aa14.26□□□□□ -0.13
LRRC9-204ENST00000562571 PCDHB13Q9Y5F0 798 aa14.24□□□□□ -0.13
LRRC9-204ENST00000562571 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
LRRC9-204ENST00000562571 BMP2KQ9NSY1 1161 aaPredicted RBP14.23□□□□□ -0.13
LRRC9-204ENST00000562571 ATN1P54259 1190 aaPredicted RBP14.22□□□□□ -0.13
LRRC9-204ENST00000562571 DCAF8Q5TAQ9 597 aa14.22□□□□□ -0.13
LRRC9-204ENST00000562571 METRNQ9UJH8 293 aa14.22□□□□□ -0.13
LRRC9-204ENST00000562571 TRPC6Q9Y210 931 aa14.2□□□□□ -0.14
LRRC9-204ENST00000562571 POTEB2H3BUK9 544 aa14.16□□□□□ -0.14
LRRC9-204ENST00000562571 GSE1Q14687 1217 aa14.16□□□□□ -0.14
LRRC9-204ENST00000562571 TTLL13PA6NNM8 815 aa14.15□□□□□ -0.14
LRRC9-204ENST00000562571 IFNL1Q8IU54 200 aa14.14□□□□□ -0.15
LRRC9-204ENST00000562571 PYGBP11216 843 aa14.1□□□□□ -0.15
LRRC9-204ENST00000562571 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
LRRC9-204ENST00000562571 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
LRRC9-204ENST00000562571 IER5LQ5T953 404 aa14.06□□□□□ -0.16
LRRC9-204ENST00000562571 SPOCK2Q92563 424 aa14.06□□□□□ -0.16
LRRC9-204ENST00000562571 TRIM35Q9UPQ4 493 aa14.05□□□□□ -0.16
LRRC9-204ENST00000562571 CHRM1P11229 460 aaPredicted RBP14.04□□□□□ -0.16
LRRC9-204ENST00000562571 MAMSTRQ6ZN01 415 aa14.04□□□□□ -0.16
LRRC9-204ENST00000562571 TMEM106CQ9BVX2 250 aa14.03□□□□□ -0.16
LRRC9-204ENST00000562571 POTEFA5A3E0 1075 aa14□□□□□ -0.17
LRRC9-204ENST00000562571 SEC24BO95487 1268 aa13.99□□□□□ -0.17
LRRC9-204ENST00000562571 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
LRRC9-204ENST00000562571 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
LRRC9-204ENST00000562571 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
LRRC9-204ENST00000562571 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
LRRC9-204ENST00000562571 COLQQ9Y215 455 aaPredicted RBP13.94□□□□□ -0.18
LRRC9-204ENST00000562571 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
LRRC9-204ENST00000562571 PLCG2P16885 1265 aa13.86□□□□□ -0.19
LRRC9-204ENST00000562571 IRX5P78411 483 aaPredicted RBP13.86□□□□□ -0.19
LRRC9-204ENST00000562571 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
LRRC9-204ENST00000562571 OCEL1Q9H607 264 aa13.83□□□□□ -0.2
LRRC9-204ENST00000562571 PSEN1P49768 467 aa13.81□□□□□ -0.2
LRRC9-204ENST00000562571 PDAP1Q13442 181 aaKnown RBP13.8□□□□□ -0.2
LRRC9-204ENST00000562571 GOLGA2Q08379 1002 aa13.78□□□□□ -0.2
LRRC9-204ENST00000562571 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
LRRC9-204ENST00000562571 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
LRRC9-204ENST00000562571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.22
LRRC9-204ENST00000562571 POTEMA6NI47 508 aa13.64□□□□□ -0.23
LRRC9-204ENST00000562571 ILDR1Q86SU0 546 aaPredicted RBP13.64□□□□□ -0.23
LRRC9-204ENST00000562571 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
LRRC9-204ENST00000562571 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
LRRC9-204ENST00000562571 POTEGQ6S5H5 508 aa13.62□□□□□ -0.23
LRRC9-204ENST00000562571 FAM163AQ96GL9 167 aaPredicted RBP13.62□□□□□ -0.23
LRRC9-204ENST00000562571 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
LRRC9-204ENST00000562571 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.6□□□□□ -0.23
LRRC9-204ENST00000562571 LCE2DQ5TA82 110 aaPredicted RBP13.59□□□□□ -0.23
LRRC9-204ENST00000562571 RIOK3O14730 519 aaKnown RBP13.58□□□□□ -0.24
LRRC9-204ENST00000562571 RNF25Q96BH1 459 aaPredicted RBP13.54□□□□□ -0.24
LRRC9-204ENST00000562571 PCDH10Q9P2E7 1040 aa13.54□□□□□ -0.24
LRRC9-204ENST00000562571 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
LRRC9-204ENST00000562571 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
LRRC9-204ENST00000562571 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
LRRC9-204ENST00000562571 SNPHO15079 494 aa13.49□□□□□ -0.25
LRRC9-204ENST00000562571 EFCAB3Q8N7B9 438 aa13.48□□□□□ -0.25
LRRC9-204ENST00000562571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
LRRC9-204ENST00000562571 DPY19L2Q6NUT2 758 aa13.46□□□□□ -0.25
LRRC9-204ENST00000562571 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
LRRC9-204ENST00000562571 G3V3G9 751 aa13.45□□□□□ -0.26
LRRC9-204ENST00000562571 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
LRRC9-204ENST00000562571 SOX12O15370 315 aa13.44□□□□□ -0.26
LRRC9-204ENST00000562571 ST18O60284 1047 aa13.43□□□□□ -0.26
LRRC9-204ENST00000562571 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
LRRC9-204ENST00000562571 ECM2O94769 699 aaPredicted RBP13.4□□□□□ -0.26
LRRC9-204ENST00000562571 PKD2Q13563 968 aa13.36□□□□□ -0.27
LRRC9-204ENST00000562571 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
LRRC9-204ENST00000562571 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
LRRC9-204ENST00000562571 MS4A4AQ96JQ5 239 aa13.29□□□□□ -0.28
LRRC9-204ENST00000562571 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
LRRC9-204ENST00000562571 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
LRRC9-204ENST00000562571 NLRP6P59044 892 aa13.28□□□□□ -0.28
LRRC9-204ENST00000562571 STK25O00506 426 aa13.27□□□□□ -0.29
LRRC9-204ENST00000562571 MICALL2Q8IY33 904 aa13.27□□□□□ -0.29
LRRC9-204ENST00000562571 RGL2O15211 777 aa13.26□□□□□ -0.29
LRRC9-204ENST00000562571 CDAN1Q8IWY9 1227 aa13.26□□□□□ -0.29
LRRC9-204ENST00000562571 FBXO22Q8NEZ5 403 aa13.22□□□□□ -0.29
LRRC9-204ENST00000562571 MARVELD3Q96A59 401 aa13.19□□□□□ -0.3
LRRC9-204ENST00000562571 MFRPQ9BY79 579 aa13.19□□□□□ -0.3
LRRC9-204ENST00000562571 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
LRRC9-204ENST00000562571 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
LRRC9-204ENST00000562571 EMP3P54852 163 aa13.16□□□□□ -0.3
LRRC9-204ENST00000562571 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
LRRC9-204ENST00000562571 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
LRRC9-204ENST00000562571 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
LRRC9-204ENST00000562571 HOXB1P14653 301 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms