RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 CCDC61Q9Y6R9 512 aa16.9■□□□□ 0.3
LINC01243-201ENST00000562065 MS4A3Q96HJ5 214 aa16.89■□□□□ 0.29
LINC01243-201ENST00000562065 LHX8Q68G74 356 aa16.85■□□□□ 0.29
LINC01243-201ENST00000562065 NUBP1P53384 320 aa16.81■□□□□ 0.28
LINC01243-201ENST00000562065 VASPP50552 380 aaPredicted RBP16.79■□□□□ 0.28
LINC01243-201ENST00000562065 KIF12Q96FN5 646 aa16.79■□□□□ 0.28
LINC01243-201ENST00000562065 FAM212AQ96EL1 285 aa16.77■□□□□ 0.28
LINC01243-201ENST00000562065 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
LINC01243-201ENST00000562065 MAP3K13O43283 966 aa16.74■□□□□ 0.27
LINC01243-201ENST00000562065 DCAF8Q5TAQ9 597 aa16.67■□□□□ 0.26
LINC01243-201ENST00000562065 ATMINO43313 823 aaPredicted RBP16.66■□□□□ 0.26
LINC01243-201ENST00000562065 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
LINC01243-201ENST00000562065 ASTLQ6HA08 431 aaPredicted RBP16.65■□□□□ 0.26
LINC01243-201ENST00000562065 TRPC6Q9Y210 931 aa16.64■□□□□ 0.25
LINC01243-201ENST00000562065 PCDHB13Q9Y5F0 798 aa16.63■□□□□ 0.25
LINC01243-201ENST00000562065 ATN1P54259 1190 aaPredicted RBP16.58■□□□□ 0.24
LINC01243-201ENST00000562065 BMP2KQ9NSY1 1161 aaPredicted RBP16.58■□□□□ 0.24
LINC01243-201ENST00000562065 METRNQ9UJH8 293 aa16.57■□□□□ 0.24
LINC01243-201ENST00000562065 SLC39A7Q92504 469 aa16.55■□□□□ 0.24
LINC01243-201ENST00000562065 PYGBP11216 843 aa16.54■□□□□ 0.24
LINC01243-201ENST00000562065 TIE1P35590 1138 aa16.54■□□□□ 0.24
LINC01243-201ENST00000562065 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
LINC01243-201ENST00000562065 IFNL1Q8IU54 200 aa16.52■□□□□ 0.24
LINC01243-201ENST00000562065 C7P10643 843 aa16.51■□□□□ 0.23
LINC01243-201ENST00000562065 TTLL13PA6NNM8 815 aa16.48■□□□□ 0.23
LINC01243-201ENST00000562065 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
LINC01243-201ENST00000562065 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
LINC01243-201ENST00000562065 GSE1Q14687 1217 aa16.47■□□□□ 0.23
LINC01243-201ENST00000562065 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
LINC01243-201ENST00000562065 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
LINC01243-201ENST00000562065 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
LINC01243-201ENST00000562065 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
LINC01243-201ENST00000562065 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
LINC01243-201ENST00000562065 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
LINC01243-201ENST00000562065 SEC24BO95487 1268 aa16.35■□□□□ 0.21
LINC01243-201ENST00000562065 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
LINC01243-201ENST00000562065 ZNF467Q7Z7K2 595 aaPredicted RBP16.27■□□□□ 0.2
LINC01243-201ENST00000562065 COLQQ9Y215 455 aaPredicted RBP16.27■□□□□ 0.2
LINC01243-201ENST00000562065 POTEJP0CG39 1038 aa16.26■□□□□ 0.19
LINC01243-201ENST00000562065 IER5LQ5T953 404 aa16.26■□□□□ 0.19
LINC01243-201ENST00000562065 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
LINC01243-201ENST00000562065 CHRM1P11229 460 aaPredicted RBP16.22■□□□□ 0.19
LINC01243-201ENST00000562065 SCUBE2Q9NQ36 999 aa16.21■□□□□ 0.19
LINC01243-201ENST00000562065 PLCG2P16885 1265 aa16.18■□□□□ 0.18
LINC01243-201ENST00000562065 PSEN1P49768 467 aa16.14■□□□□ 0.17
LINC01243-201ENST00000562065 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
LINC01243-201ENST00000562065 IRX5P78411 483 aaPredicted RBP16.09■□□□□ 0.17
LINC01243-201ENST00000562065 PDAP1Q13442 181 aaKnown RBP16.08■□□□□ 0.16
LINC01243-201ENST00000562065 MKRN3Q13064 507 aaKnown RBP16.06■□□□□ 0.16
LINC01243-201ENST00000562065 OCEL1Q9H607 264 aa16.06■□□□□ 0.16
LINC01243-201ENST00000562065 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
LINC01243-201ENST00000562065 CABP2Q9NPB3 220 aa15.98■□□□□ 0.15
LINC01243-201ENST00000562065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC01243-201ENST00000562065 SLAIN1Q8ND83 568 aa15.94■□□□□ 0.14
LINC01243-201ENST00000562065 FAM163AQ96GL9 167 aaPredicted RBP15.93■□□□□ 0.14
LINC01243-201ENST00000562065 PDCD7Q8N8D1 485 aaKnown RBP15.9■□□□□ 0.14
LINC01243-201ENST00000562065 POTEMA6NI47 508 aa15.86■□□□□ 0.13
LINC01243-201ENST00000562065 RIOK3O14730 519 aaKnown RBP15.86■□□□□ 0.13
LINC01243-201ENST00000562065 POTEGQ6S5H5 508 aa15.85■□□□□ 0.13
LINC01243-201ENST00000562065 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.85■□□□□ 0.13
LINC01243-201ENST00000562065 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
LINC01243-201ENST00000562065 C3orf67Q6ZVT6 689 aa15.82■□□□□ 0.12
LINC01243-201ENST00000562065 L3MBTL3Q96JM7 780 aaPredicted RBP15.82■□□□□ 0.12
LINC01243-201ENST00000562065 EFCAB3Q8N7B9 438 aa15.79■□□□□ 0.12
LINC01243-201ENST00000562065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.78■□□□□ 0.12
LINC01243-201ENST00000562065 VGFO15240 615 aaPredicted RBP15.78■□□□□ 0.12
LINC01243-201ENST00000562065 ZFP91Q96JP5 570 aaPredicted RBP15.78■□□□□ 0.12
LINC01243-201ENST00000562065 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
LINC01243-201ENST00000562065 G3V3G9 751 aa15.76■□□□□ 0.11
LINC01243-201ENST00000562065 LCE2DQ5TA82 110 aaPredicted RBP15.76■□□□□ 0.11
LINC01243-201ENST00000562065 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
LINC01243-201ENST00000562065 ILDR1Q86SU0 546 aaPredicted RBP15.72■□□□□ 0.11
LINC01243-201ENST00000562065 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
LINC01243-201ENST00000562065 BOLA1Q9Y3E2 137 aa15.67■□□□□ 0.1
LINC01243-201ENST00000562065 PLSCR2Q9NRY7 297 aa15.65■□□□□ 0.1
LINC01243-201ENST00000562065 PKD2Q13563 968 aa15.64■□□□□ 0.09
LINC01243-201ENST00000562065 BCL11BQ9C0K0 894 aaPredicted RBP15.64■□□□□ 0.09
LINC01243-201ENST00000562065 SNPHO15079 494 aa15.63■□□□□ 0.09
LINC01243-201ENST00000562065 ST18O60284 1047 aa15.63■□□□□ 0.09
LINC01243-201ENST00000562065 STK24Q9Y6E0 443 aa15.63■□□□□ 0.09
LINC01243-201ENST00000562065 SOX12O15370 315 aa15.6■□□□□ 0.09
LINC01243-201ENST00000562065 PHF8Q9UPP1 1060 aa15.59■□□□□ 0.09
LINC01243-201ENST00000562065 STK25O00506 426 aa15.58■□□□□ 0.08
LINC01243-201ENST00000562065 RGL2O15211 777 aa15.58■□□□□ 0.08
LINC01243-201ENST00000562065 MS4A4AQ96JQ5 239 aa15.51■□□□□ 0.07
LINC01243-201ENST00000562065 PCDH10Q9P2E7 1040 aa15.51■□□□□ 0.07
LINC01243-201ENST00000562065 NLRP6P59044 892 aa15.49■□□□□ 0.07
LINC01243-201ENST00000562065 MICALL2Q8IY33 904 aa15.49■□□□□ 0.07
LINC01243-201ENST00000562065 TMEM121BQ9BXQ6 578 aaPredicted RBP15.48■□□□□ 0.07
LINC01243-201ENST00000562065 MARVELD3Q96A59 401 aa15.47■□□□□ 0.07
LINC01243-201ENST00000562065 CDAN1Q8IWY9 1227 aa15.43■□□□□ 0.06
LINC01243-201ENST00000562065 FBXO22Q8NEZ5 403 aa15.4■□□□□ 0.06
LINC01243-201ENST00000562065 MFRPQ9BY79 579 aa15.4■□□□□ 0.06
LINC01243-201ENST00000562065 EMP3P54852 163 aa15.38■□□□□ 0.05
LINC01243-201ENST00000562065 ZNF710Q8N1W2 664 aa15.36■□□□□ 0.05
LINC01243-201ENST00000562065 TMEM92Q6UXU6 159 aa15.35■□□□□ 0.05
LINC01243-201ENST00000562065 HOXB3P14651 431 aaPredicted RBP15.33■□□□□ 0.04
LINC01243-201ENST00000562065 DOK7Q18PE1 504 aa15.32■□□□□ 0.04
LINC01243-201ENST00000562065 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
LINC01243-201ENST00000562065 RIMBP2O15034 1052 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms