RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 CHRM1P11229 460 aaPredicted RBP14.53□□□□□ -0.08
DENND4A-204ENST00000562028 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
DENND4A-204ENST00000562028 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
DENND4A-204ENST00000562028 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
DENND4A-204ENST00000562028 PYGBP11216 843 aa14.43□□□□□ -0.1
DENND4A-204ENST00000562028 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
DENND4A-204ENST00000562028 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
DENND4A-204ENST00000562028 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
DENND4A-204ENST00000562028 CD44P16070 742 aaKnown RBP14.35□□□□□ -0.11
DENND4A-204ENST00000562028 VGFO15240 615 aaPredicted RBP14.32□□□□□ -0.12
DENND4A-204ENST00000562028 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
DENND4A-204ENST00000562028 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
DENND4A-204ENST00000562028 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
DENND4A-204ENST00000562028 C19orf67A6NJJ6 358 aa14.3□□□□□ -0.12
DENND4A-204ENST00000562028 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
DENND4A-204ENST00000562028 ZNF467Q7Z7K2 595 aaPredicted RBP14.29□□□□□ -0.12
DENND4A-204ENST00000562028 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
DENND4A-204ENST00000562028 SGIP1Q9BQI5 828 aa14.29□□□□□ -0.12
DENND4A-204ENST00000562028 PLCB2Q00722 1185 aa14.25□□□□□ -0.13
DENND4A-204ENST00000562028 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
DENND4A-204ENST00000562028 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.25□□□□□ -0.13
DENND4A-204ENST00000562028 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
DENND4A-204ENST00000562028 PCDHB13Q9Y5F0 798 aa14.22□□□□□ -0.13
DENND4A-204ENST00000562028 MAP3K13O43283 966 aa14.21□□□□□ -0.13
DENND4A-204ENST00000562028 DNAJC5Q9H3Z4 198 aa14.21□□□□□ -0.13
DENND4A-204ENST00000562028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.2□□□□□ -0.14
DENND4A-204ENST00000562028 STK25O00506 426 aa14.2□□□□□ -0.14
DENND4A-204ENST00000562028 ZFP91Q96JP5 570 aaPredicted RBP14.2□□□□□ -0.14
DENND4A-204ENST00000562028 PCDHB8Q9UN66 801 aa14.2□□□□□ -0.14
DENND4A-204ENST00000562028 PDAP1Q13442 181 aaKnown RBP14.17□□□□□ -0.14
DENND4A-204ENST00000562028 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
DENND4A-204ENST00000562028 IFNL1Q8IU54 200 aa14.16□□□□□ -0.14
DENND4A-204ENST00000562028 HAX1O00165 279 aa14.15□□□□□ -0.14
DENND4A-204ENST00000562028 BCL11BQ9C0K0 894 aaPredicted RBP14.14□□□□□ -0.15
DENND4A-204ENST00000562028 STK24Q9Y6E0 443 aa14.13□□□□□ -0.15
DENND4A-204ENST00000562028 PSEN1P49768 467 aa14.11□□□□□ -0.15
DENND4A-204ENST00000562028 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
DENND4A-204ENST00000562028 SPRYD3Q8NCJ5 442 aa14.1□□□□□ -0.15
DENND4A-204ENST00000562028 CFAP44Q96MT7 982 aa14.07□□□□□ -0.16
DENND4A-204ENST00000562028 POTEHQ6S545 545 aa14.06□□□□□ -0.16
DENND4A-204ENST00000562028 CLCN6P51797 869 aa14.05□□□□□ -0.16
DENND4A-204ENST00000562028 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
DENND4A-204ENST00000562028 EVX2Q03828 476 aa14.04□□□□□ -0.16
DENND4A-204ENST00000562028 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
DENND4A-204ENST00000562028 HAP1P54257 671 aaPredicted RBP14.01□□□□□ -0.17
DENND4A-204ENST00000562028 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
DENND4A-204ENST00000562028 GTPBP6O43824 516 aaPredicted RBP13.96□□□□□ -0.17
DENND4A-204ENST00000562028 TRPC6Q9Y210 931 aa13.93□□□□□ -0.18
DENND4A-204ENST00000562028 GALR2O43603 387 aaPredicted RBP13.92□□□□□ -0.18
DENND4A-204ENST00000562028 TIE1P35590 1138 aa13.92□□□□□ -0.18
DENND4A-204ENST00000562028 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
DENND4A-204ENST00000562028 CABP2Q9NPB3 220 aa13.92□□□□□ -0.18
DENND4A-204ENST00000562028 EFCAB3Q8N7B9 438 aa13.88□□□□□ -0.19
DENND4A-204ENST00000562028 SOX12O15370 315 aa13.87□□□□□ -0.19
DENND4A-204ENST00000562028 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
DENND4A-204ENST00000562028 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
DENND4A-204ENST00000562028 MFRPQ9BY79 579 aa13.85□□□□□ -0.19
DENND4A-204ENST00000562028 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
DENND4A-204ENST00000562028 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
DENND4A-204ENST00000562028 BMP2KQ9NSY1 1161 aaPredicted RBP13.84□□□□□ -0.19
DENND4A-204ENST00000562028 GABBR2O75899 941 aa13.82□□□□□ -0.2
DENND4A-204ENST00000562028 NLRP6P59044 892 aa13.81□□□□□ -0.2
DENND4A-204ENST00000562028 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
DENND4A-204ENST00000562028 FBXO22Q8NEZ5 403 aa13.78□□□□□ -0.2
DENND4A-204ENST00000562028 PHF8Q9UPP1 1060 aa13.77□□□□□ -0.21
DENND4A-204ENST00000562028 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
DENND4A-204ENST00000562028 ASTLQ6HA08 431 aaPredicted RBP13.74□□□□□ -0.21
DENND4A-204ENST00000562028 ATMINO43313 823 aaPredicted RBP13.73□□□□□ -0.21
DENND4A-204ENST00000562028 ATN1P54259 1190 aaPredicted RBP13.72□□□□□ -0.21
DENND4A-204ENST00000562028 KDM2AQ9Y2K7 1162 aa13.72□□□□□ -0.21
DENND4A-204ENST00000562028 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
DENND4A-204ENST00000562028 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
DENND4A-204ENST00000562028 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
DENND4A-204ENST00000562028 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
DENND4A-204ENST00000562028 PPP1R37O75864 691 aa13.66□□□□□ -0.22
DENND4A-204ENST00000562028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.227e-8■■■■□ 24.3
DENND4A-204ENST00000562028 IER5LQ5T953 404 aa13.65□□□□□ -0.22
DENND4A-204ENST00000562028 IRX5P78411 483 aaPredicted RBP13.58□□□□□ -0.24
DENND4A-204ENST00000562028 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
DENND4A-204ENST00000562028 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
DENND4A-204ENST00000562028 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
DENND4A-204ENST00000562028 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
DENND4A-204ENST00000562028 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
DENND4A-204ENST00000562028 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
DENND4A-204ENST00000562028 C7P10643 843 aa13.5□□□□□ -0.25
DENND4A-204ENST00000562028 PLCG2P16885 1265 aa13.5□□□□□ -0.25
DENND4A-204ENST00000562028 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
DENND4A-204ENST00000562028 SEC24BO95487 1268 aa13.47□□□□□ -0.25
DENND4A-204ENST00000562028 WDR70Q9NW82 654 aa13.45□□□□□ -0.26
DENND4A-204ENST00000562028 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
DENND4A-204ENST00000562028 MICALL2Q8IY33 904 aa13.43□□□□□ -0.26
DENND4A-204ENST00000562028 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
DENND4A-204ENST00000562028 PDE4AP27815 886 aa13.42□□□□□ -0.26
DENND4A-204ENST00000562028 L3MBTL3Q96JM7 780 aaPredicted RBP13.42□□□□□ -0.26
DENND4A-204ENST00000562028 BOLA1Q9Y3E2 137 aa13.42□□□□□ -0.26
DENND4A-204ENST00000562028 BCANQ96GW7 911 aa13.41□□□□□ -0.26
DENND4A-204ENST00000562028 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
DENND4A-204ENST00000562028 NCKAP5LQ9HCH0 1330 aa13.4□□□□□ -0.26
DENND4A-204ENST00000562028 G3V3G9 751 aa13.4□□□□□ -0.26
DENND4A-204ENST00000562028 CRISPLD2Q9H0B8 497 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms