RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 NUBP1P53384 320 aa16.08■□□□□ 0.16
HMBOX1-216ENST00000561377 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.16
HMBOX1-216ENST00000561377 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
HMBOX1-216ENST00000561377 FAM212AQ96EL1 285 aa16.02■□□□□ 0.16
HMBOX1-216ENST00000561377 POTEIP0CG38 1075 aa16■□□□□ 0.15
HMBOX1-216ENST00000561377 MS4A3Q96HJ5 214 aa15.99■□□□□ 0.15
HMBOX1-216ENST00000561377 KIF12Q96FN5 646 aa15.97■□□□□ 0.15
HMBOX1-216ENST00000561377 DCAF8Q5TAQ9 597 aa15.91■□□□□ 0.14
HMBOX1-216ENST00000561377 MAP3K13O43283 966 aa15.9■□□□□ 0.14
HMBOX1-216ENST00000561377 IFNLR1Q8IU57 520 aaPredicted RBP15.87■□□□□ 0.13
HMBOX1-216ENST00000561377 SGIP1Q9BQI5 828 aa15.85■□□□□ 0.13
HMBOX1-216ENST00000561377 GSE1Q14687 1217 aa15.83■□□□□ 0.12
HMBOX1-216ENST00000561377 SPOCK2Q92563 424 aa15.82■□□□□ 0.12
HMBOX1-216ENST00000561377 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
HMBOX1-216ENST00000561377 ASTLQ6HA08 431 aaPredicted RBP15.8■□□□□ 0.12
HMBOX1-216ENST00000561377 ATMINO43313 823 aaPredicted RBP15.77■□□□□ 0.12
HMBOX1-216ENST00000561377 LHX8Q68G74 356 aa15.77■□□□□ 0.12
HMBOX1-216ENST00000561377 PYGBP11216 843 aa15.75■□□□□ 0.11
HMBOX1-216ENST00000561377 TIE1P35590 1138 aa15.75■□□□□ 0.11
HMBOX1-216ENST00000561377 TRPC6Q9Y210 931 aa15.73■□□□□ 0.11
HMBOX1-216ENST00000561377 PELP1Q8IZL8 1130 aaKnown RBP15.72■□□□□ 0.11
HMBOX1-216ENST00000561377 BMP2KQ9NSY1 1161 aaPredicted RBP15.72■□□□□ 0.11
HMBOX1-216ENST00000561377 IFNL1Q8IU54 200 aa15.71■□□□□ 0.11
HMBOX1-216ENST00000561377 ATN1P54259 1190 aaPredicted RBP15.69■□□□□ 0.1
HMBOX1-216ENST00000561377 SLC39A7Q92504 469 aa15.69■□□□□ 0.1
HMBOX1-216ENST00000561377 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
HMBOX1-216ENST00000561377 C7P10643 843 aa15.65■□□□□ 0.1
HMBOX1-216ENST00000561377 TTLL13PA6NNM8 815 aa15.64■□□□□ 0.09
HMBOX1-216ENST00000561377 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
HMBOX1-216ENST00000561377 METRNQ9UJH8 293 aa15.63■□□□□ 0.09
HMBOX1-216ENST00000561377 ZNF467Q7Z7K2 595 aaPredicted RBP15.59■□□□□ 0.09
HMBOX1-216ENST00000561377 TMEM106CQ9BVX2 250 aa15.57■□□□□ 0.08
HMBOX1-216ENST00000561377 PCDHB8Q9UN66 801 aa15.57■□□□□ 0.08
HMBOX1-216ENST00000561377 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
HMBOX1-216ENST00000561377 TRIM41Q8WV44 630 aa15.52■□□□□ 0.08
HMBOX1-216ENST00000561377 POTEB2H3BUK9 544 aa15.49■□□□□ 0.07
HMBOX1-216ENST00000561377 IER5LQ5T953 404 aa15.49■□□□□ 0.07
HMBOX1-216ENST00000561377 SEC24BO95487 1268 aa15.45■□□□□ 0.06
HMBOX1-216ENST00000561377 PSEN1P49768 467 aa15.41■□□□□ 0.06
HMBOX1-216ENST00000561377 POTEFA5A3E0 1075 aa15.4■□□□□ 0.06
HMBOX1-216ENST00000561377 PDAP1Q13442 181 aaKnown RBP15.39■□□□□ 0.05
HMBOX1-216ENST00000561377 OTUD5Q96G74 571 aa15.37■□□□□ 0.05
HMBOX1-216ENST00000561377 COLQQ9Y215 455 aaPredicted RBP15.37■□□□□ 0.05
HMBOX1-216ENST00000561377 MAMSTRQ6ZN01 415 aa15.36■□□□□ 0.05
HMBOX1-216ENST00000561377 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
HMBOX1-216ENST00000561377 PLCG2P16885 1265 aa15.33■□□□□ 0.04
HMBOX1-216ENST00000561377 POTEJP0CG39 1038 aa15.31■□□□□ 0.04
HMBOX1-216ENST00000561377 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
HMBOX1-216ENST00000561377 SCUBE2Q9NQ36 999 aa15.3■□□□□ 0.04
HMBOX1-216ENST00000561377 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
HMBOX1-216ENST00000561377 OCEL1Q9H607 264 aa15.28■□□□□ 0.04
HMBOX1-216ENST00000561377 RIOK3O14730 519 aaKnown RBP15.25■□□□□ 0.03
HMBOX1-216ENST00000561377 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
HMBOX1-216ENST00000561377 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
HMBOX1-216ENST00000561377 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
HMBOX1-216ENST00000561377 ECM2O94769 699 aaPredicted RBP15.18■□□□□ 0.02
HMBOX1-216ENST00000561377 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
HMBOX1-216ENST00000561377 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
HMBOX1-216ENST00000561377 PDCD7Q8N8D1 485 aaKnown RBP15.13■□□□□ 0.01
HMBOX1-216ENST00000561377 PKD2Q13563 968 aa15.12■□□□□ 0.01
HMBOX1-216ENST00000561377 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
HMBOX1-216ENST00000561377 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
HMBOX1-216ENST00000561377 L3MBTL3Q96JM7 780 aaPredicted RBP15.08■□□□□ 0
HMBOX1-216ENST00000561377 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
HMBOX1-216ENST00000561377 EFCAB3Q8N7B9 438 aa15.06■□□□□ 0
HMBOX1-216ENST00000561377 SLAIN1Q8ND83 568 aa15.03■□□□□ -0
HMBOX1-216ENST00000561377 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.02■□□□□ -0
HMBOX1-216ENST00000561377 RGL2O15211 777 aa15.01□□□□□ -0.01
HMBOX1-216ENST00000561377 SOX12O15370 315 aa14.99□□□□□ -0.01
HMBOX1-216ENST00000561377 C3orf67Q6ZVT6 689 aa14.98□□□□□ -0.01
HMBOX1-216ENST00000561377 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
HMBOX1-216ENST00000561377 G3V3G9 751 aa14.97□□□□□ -0.01
HMBOX1-216ENST00000561377 DPY19L2Q6NUT2 758 aa14.96□□□□□ -0.01
HMBOX1-216ENST00000561377 STK24Q9Y6E0 443 aa14.96□□□□□ -0.01
HMBOX1-216ENST00000561377 STK25O00506 426 aa14.95□□□□□ -0.02
HMBOX1-216ENST00000561377 BOLA1Q9Y3E2 137 aa14.92□□□□□ -0.02
HMBOX1-216ENST00000561377 FAM163AQ96GL9 167 aaPredicted RBP14.9□□□□□ -0.02
HMBOX1-216ENST00000561377 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
HMBOX1-216ENST00000561377 NLRP6P59044 892 aa14.86□□□□□ -0.03
HMBOX1-216ENST00000561377 SNPHO15079 494 aa14.83□□□□□ -0.04
HMBOX1-216ENST00000561377 MS4A4AQ96JQ5 239 aa14.83□□□□□ -0.04
HMBOX1-216ENST00000561377 POTEMA6NI47 508 aa14.82□□□□□ -0.04
HMBOX1-216ENST00000561377 TMEM121BQ9BXQ6 578 aaPredicted RBP14.81□□□□□ -0.04
HMBOX1-216ENST00000561377 LCE2DQ5TA82 110 aaPredicted RBP14.8□□□□□ -0.04
HMBOX1-216ENST00000561377 POTEGQ6S5H5 508 aa14.79□□□□□ -0.04
HMBOX1-216ENST00000561377 FBXO22Q8NEZ5 403 aa14.78□□□□□ -0.04
HMBOX1-216ENST00000561377 MICALL2Q8IY33 904 aa14.77□□□□□ -0.05
HMBOX1-216ENST00000561377 MFRPQ9BY79 579 aa14.77□□□□□ -0.05
HMBOX1-216ENST00000561377 HS6ST3Q8IZP7 471 aa14.73□□□□□ -0.05
HMBOX1-216ENST00000561377 ST18O60284 1047 aa14.72□□□□□ -0.05
HMBOX1-216ENST00000561377 CHGAP10645 457 aaKnown RBP14.68□□□□□ -0.06
HMBOX1-216ENST00000561377 PCDH10Q9P2E7 1040 aa14.62□□□□□ -0.07
HMBOX1-216ENST00000561377 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
HMBOX1-216ENST00000561377 DOK7Q18PE1 504 aa14.57□□□□□ -0.08
HMBOX1-216ENST00000561377 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
HMBOX1-216ENST00000561377 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
HMBOX1-216ENST00000561377 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
HMBOX1-216ENST00000561377 ZNF710Q8N1W2 664 aa14.53□□□□□ -0.08
HMBOX1-216ENST00000561377 RIMBP2O15034 1052 aa14.51□□□□□ -0.09
HMBOX1-216ENST00000561377 PPP1R37O75864 691 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms