RNA–Protein interactions for RNA: ENST00000561308.5

LINS1-214, Transcript of lines homolog 1, humanhuman

TSL 1 (best) BASIC

Gene LINS1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-214ENST00000561308 RASEFQ8IZ41 740 aa14.43□□□□□ -0.1
LINS1-214ENST00000561308 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
LINS1-214ENST00000561308 FBXO3Q9UK99 471 aa14.41□□□□□ -0.1
LINS1-214ENST00000561308 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
LINS1-214ENST00000561308 NUBP1P53384 320 aa14.33□□□□□ -0.11
LINS1-214ENST00000561308 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
LINS1-214ENST00000561308 MAP3K13O43283 966 aa14.29□□□□□ -0.12
LINS1-214ENST00000561308 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
LINS1-214ENST00000561308 ATMINO43313 823 aaPredicted RBP14.27□□□□□ -0.12
LINS1-214ENST00000561308 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
LINS1-214ENST00000561308 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
LINS1-214ENST00000561308 SLC39A7Q92504 469 aa14.19□□□□□ -0.14
LINS1-214ENST00000561308 TRPC6Q9Y210 931 aa14.19□□□□□ -0.14
LINS1-214ENST00000561308 ATN1P54259 1190 aaPredicted RBP14.18□□□□□ -0.14
LINS1-214ENST00000561308 METRNQ9UJH8 293 aa14.18□□□□□ -0.14
LINS1-214ENST00000561308 C7P10643 843 aa14.17□□□□□ -0.14
LINS1-214ENST00000561308 SGIP1Q9BQI5 828 aa14.17□□□□□ -0.14
LINS1-214ENST00000561308 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
LINS1-214ENST00000561308 PCDHB13Q9Y5F0 798 aa14.17□□□□□ -0.14
LINS1-214ENST00000561308 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
LINS1-214ENST00000561308 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
LINS1-214ENST00000561308 TIE1P35590 1138 aa14.15□□□□□ -0.14
LINS1-214ENST00000561308 DCAF8Q5TAQ9 597 aa14.15□□□□□ -0.14
LINS1-214ENST00000561308 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
LINS1-214ENST00000561308 IFNL1Q8IU54 200 aa14.08□□□□□ -0.16
LINS1-214ENST00000561308 OTUD5Q96G74 571 aa14.08□□□□□ -0.16
LINS1-214ENST00000561308 PYGBP11216 843 aa14.04□□□□□ -0.16
LINS1-214ENST00000561308 GSE1Q14687 1217 aa14.01□□□□□ -0.17
LINS1-214ENST00000561308 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
LINS1-214ENST00000561308 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
LINS1-214ENST00000561308 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
LINS1-214ENST00000561308 POTEFA5A3E0 1075 aa13.97□□□□□ -0.17
LINS1-214ENST00000561308 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
LINS1-214ENST00000561308 SEC24BO95487 1268 aa13.94□□□□□ -0.18
LINS1-214ENST00000561308 MAMSTRQ6ZN01 415 aa13.94□□□□□ -0.18
LINS1-214ENST00000561308 IER5LQ5T953 404 aa13.93□□□□□ -0.18
LINS1-214ENST00000561308 SPOCK2Q92563 424 aa13.93□□□□□ -0.18
LINS1-214ENST00000561308 PCDHB8Q9UN66 801 aa13.93□□□□□ -0.18
LINS1-214ENST00000561308 COLQQ9Y215 455 aaPredicted RBP13.92□□□□□ -0.18
LINS1-214ENST00000561308 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
LINS1-214ENST00000561308 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
LINS1-214ENST00000561308 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
LINS1-214ENST00000561308 CIZ1Q9ULV3 898 aaPredicted RBP13.84□□□□□ -0.19
LINS1-214ENST00000561308 PLCG2P16885 1265 aa13.79□□□□□ -0.2
LINS1-214ENST00000561308 IRX5P78411 483 aaPredicted RBP13.77□□□□□ -0.21
LINS1-214ENST00000561308 PSEN1P49768 467 aa13.73□□□□□ -0.21
LINS1-214ENST00000561308 OCEL1Q9H607 264 aa13.73□□□□□ -0.21
LINS1-214ENST00000561308 GOLGA2Q08379 1002 aa13.71□□□□□ -0.22
LINS1-214ENST00000561308 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
LINS1-214ENST00000561308 MKRN3Q13064 507 aaKnown RBP13.67□□□□□ -0.22
LINS1-214ENST00000561308 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
LINS1-214ENST00000561308 POTEMA6NI47 508 aa13.64□□□□□ -0.23
LINS1-214ENST00000561308 FAM163AQ96GL9 167 aaPredicted RBP13.63□□□□□ -0.23
LINS1-214ENST00000561308 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
LINS1-214ENST00000561308 SLAIN1Q8ND83 568 aa13.61□□□□□ -0.23
LINS1-214ENST00000561308 PDCD7Q8N8D1 485 aaKnown RBP13.59□□□□□ -0.23
LINS1-214ENST00000561308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINS1-214ENST00000561308 LCE2DQ5TA82 110 aaPredicted RBP13.57□□□□□ -0.24
LINS1-214ENST00000561308 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
LINS1-214ENST00000561308 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
LINS1-214ENST00000561308 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
LINS1-214ENST00000561308 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
LINS1-214ENST00000561308 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
LINS1-214ENST00000561308 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
LINS1-214ENST00000561308 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
LINS1-214ENST00000561308 PLSCR2Q9NRY7 297 aa13.44□□□□□ -0.26
LINS1-214ENST00000561308 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
LINS1-214ENST00000561308 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
LINS1-214ENST00000561308 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
LINS1-214ENST00000561308 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
LINS1-214ENST00000561308 ST18O60284 1047 aa13.4□□□□□ -0.26
LINS1-214ENST00000561308 G3V3G9 751 aa13.39□□□□□ -0.27
LINS1-214ENST00000561308 SNPHO15079 494 aa13.39□□□□□ -0.27
LINS1-214ENST00000561308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.38□□□□□ -0.27
LINS1-214ENST00000561308 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
LINS1-214ENST00000561308 BOLA1Q9Y3E2 137 aa13.36□□□□□ -0.27
LINS1-214ENST00000561308 TAOK2Q9UL54 1235 aa13.31□□□□□ -0.28
LINS1-214ENST00000561308 SOX12O15370 315 aa13.3□□□□□ -0.28
LINS1-214ENST00000561308 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
LINS1-214ENST00000561308 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
LINS1-214ENST00000561308 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
LINS1-214ENST00000561308 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
LINS1-214ENST00000561308 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
LINS1-214ENST00000561308 PKD2Q13563 968 aa13.23□□□□□ -0.29
LINS1-214ENST00000561308 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
LINS1-214ENST00000561308 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
LINS1-214ENST00000561308 MARVELD3Q96A59 401 aa13.21□□□□□ -0.3
LINS1-214ENST00000561308 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
LINS1-214ENST00000561308 STK25O00506 426 aa13.18□□□□□ -0.3
LINS1-214ENST00000561308 RGL2O15211 777 aa13.17□□□□□ -0.3
LINS1-214ENST00000561308 NLRP6P59044 892 aa13.17□□□□□ -0.3
LINS1-214ENST00000561308 EMP3P54852 163 aa13.13□□□□□ -0.31
LINS1-214ENST00000561308 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
LINS1-214ENST00000561308 FBXO22Q8NEZ5 403 aa13.12□□□□□ -0.31
LINS1-214ENST00000561308 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
LINS1-214ENST00000561308 MFRPQ9BY79 579 aa13.1□□□□□ -0.31
LINS1-214ENST00000561308 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
LINS1-214ENST00000561308 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.32
LINS1-214ENST00000561308 FAM205CA6NFA0 338 aa13.04□□□□□ -0.32
LINS1-214ENST00000561308 RIMBP2O15034 1052 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms