RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 SNPHO15079 494 aa6.17□□□□□ -1.42
RNF111-211ENST00000560952 PRR29P0C7W0 189 aa6.17□□□□□ -1.42
RNF111-211ENST00000560952 FBLN2P98095 1184 aa6.16□□□□□ -1.42
RNF111-211ENST00000560952 RNF166Q96A37 237 aaPredicted RBP6.14□□□□□ -1.43
RNF111-211ENST00000560952 ATMINO43313 823 aaPredicted RBP6.09□□□□□ -1.43
RNF111-211ENST00000560952 PAK3O75914 559 aaPredicted RBP6.09□□□□□ -1.43
RNF111-211ENST00000560952 SLAIN1Q8ND83 568 aa6.02□□□□□ -1.45
RNF111-211ENST00000560952 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
RNF111-211ENST00000560952 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
RNF111-211ENST00000560952 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
RNF111-211ENST00000560952 PTGER2P43116 358 aa6□□□□□ -1.45
RNF111-211ENST00000560952 MKRN4PQ13434 485 aaPredicted RBP6□□□□□ -1.45
RNF111-211ENST00000560952 KRTAP4-6Q9BYQ5 205 aa6□□□□□ -1.45
RNF111-211ENST00000560952 RGS20O76081 388 aa5.99□□□□□ -1.45
RNF111-211ENST00000560952 MYT1LQ9UL68 1186 aa5.96□□□□□ -1.45
RNF111-211ENST00000560952 ZNF692Q9BU19 519 aaPredicted RBP5.95□□□□□ -1.46
RNF111-211ENST00000560952 IRX2Q9BZI1 471 aaPredicted RBP5.93□□□□□ -1.46
RNF111-211ENST00000560952 SSUH2Q9Y2M2 353 aa5.93□□□□□ -1.46
RNF111-211ENST00000560952 EMP3P54852 163 aa5.92□□□□□ -1.46
RNF111-211ENST00000560952 SPDYE4A6NLX3 237 aa5.9□□□□□ -1.46
RNF111-211ENST00000560952 SEC24BO95487 1268 aa5.89□□□□□ -1.47
RNF111-211ENST00000560952 PLA2G2EQ9NZK7 142 aa5.89□□□□□ -1.47
RNF111-211ENST00000560952 MARVELD3Q96A59 401 aa5.88□□□□□ -1.47
RNF111-211ENST00000560952 HS3ST6Q96QI5 342 aa5.87□□□□□ -1.47
RNF111-211ENST00000560952 PHF12Q96QT6 1004 aa5.86□□□□□ -1.47
RNF111-211ENST00000560952 STAG3Q9UJ98 1225 aa5.85□□□□□ -1.47
RNF111-211ENST00000560952 POTEFA5A3E0 1075 aa5.84□□□□□ -1.47
RNF111-211ENST00000560952 PABPN1Q86U42 306 aaKnown RBP eCLIP5.84□□□□□ -1.47
RNF111-211ENST00000560952 ATN1P54259 1190 aaPredicted RBP5.83□□□□□ -1.48
RNF111-211ENST00000560952 FKBP8Q14318 412 aa5.81□□□□□ -1.48
RNF111-211ENST00000560952 IER5LQ5T953 404 aa5.8□□□□□ -1.48
RNF111-211ENST00000560952 PROM2Q8N271 834 aa5.79□□□□□ -1.48
RNF111-211ENST00000560952 MS4A3Q96HJ5 214 aa5.78□□□□□ -1.48
RNF111-211ENST00000560952 FAM205CA6NFA0 338 aa5.78□□□□□ -1.48
RNF111-211ENST00000560952 FBXO3Q9UK99 471 aa5.74□□□□□ -1.49
RNF111-211ENST00000560952 PLEKHG5O94827 1062 aa5.71□□□□□ -1.5
RNF111-211ENST00000560952 NPM1P06748 294 aaKnown RBP eCLIP5.71□□□□□ -1.5
RNF111-211ENST00000560952 TIE1P35590 1138 aa5.7□□□□□ -1.5
RNF111-211ENST00000560952 POTEB3A0JP26 581 aa5.69□□□□□ -1.5
RNF111-211ENST00000560952 POTEBQ6S5H4 581 aa5.69□□□□□ -1.5
RNF111-211ENST00000560952 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.68□□□□□ -1.5
RNF111-211ENST00000560952 HCSTQ9UBK5 93 aa5.67□□□□□ -1.5
RNF111-211ENST00000560952 COLQQ9Y215 455 aaPredicted RBP5.67□□□□□ -1.5
RNF111-211ENST00000560952 ZBTB47Q9UFB7 747 aaPredicted RBP5.65□□□□□ -1.51
RNF111-211ENST00000560952 BMP2KQ9NSY1 1161 aaPredicted RBP5.63□□□□□ -1.51
RNF111-211ENST00000560952 Q6ZNB5 142 aa5.63□□□□□ -1.51
RNF111-211ENST00000560952 MIER1Q8N108 512 aa5.62□□□□□ -1.51
RNF111-211ENST00000560952 PLCD3Q8N3E9 789 aa5.62□□□□□ -1.51
RNF111-211ENST00000560952 CREBZFQ9NS37 354 aa5.62□□□□□ -1.51
RNF111-211ENST00000560952 PLCG2P16885 1265 aa5.57□□□□□ -1.52
RNF111-211ENST00000560952 VASPP50552 380 aaPredicted RBP5.57□□□□□ -1.52
RNF111-211ENST00000560952 LAPTM4AQ15012 233 aa5.57□□□□□ -1.52
RNF111-211ENST00000560952 MNX1P50219 401 aaPredicted RBP5.53□□□□□ -1.52
RNF111-211ENST00000560952 ERBB3P21860 1342 aa5.53□□□□□ -1.52
RNF111-211ENST00000560952 IFFO2Q5TF58 517 aa5.52□□□□□ -1.53
RNF111-211ENST00000560952 KLHL34Q8N239 644 aa5.52□□□□□ -1.53
RNF111-211ENST00000560952 FAM212AQ96EL1 285 aa5.48□□□□□ -1.53
RNF111-211ENST00000560952 STK17AQ9UEE5 414 aa5.47□□□□□ -1.53
RNF111-211ENST00000560952 SPOCK2Q92563 424 aa5.47□□□□□ -1.53
RNF111-211ENST00000560952 TTLL13PA6NNM8 815 aa5.46□□□□□ -1.54
RNF111-211ENST00000560952 GSE1Q14687 1217 aa5.46□□□□□ -1.54
RNF111-211ENST00000560952 ZNF687Q8N1G0 1237 aa5.46□□□□□ -1.54
RNF111-211ENST00000560952 NUBP1P53384 320 aa5.45□□□□□ -1.54
RNF111-211ENST00000560952 TRAF7Q6Q0C0 670 aa5.45□□□□□ -1.54
RNF111-211ENST00000560952 HOXB1P14653 301 aaPredicted RBP5.44□□□□□ -1.54
RNF111-211ENST00000560952 IFNLR1Q8IU57 520 aaPredicted RBP5.44□□□□□ -1.54
RNF111-211ENST00000560952 SUZ12Q15022 739 aaKnown RBP5.43□□□□□ -1.54
RNF111-211ENST00000560952 TSPYL2Q9H2G4 693 aaPredicted RBP5.43□□□□□ -1.54
RNF111-211ENST00000560952 TRIM41Q8WV44 630 aa5.42□□□□□ -1.54
RNF111-211ENST00000560952 TRIM35Q9UPQ4 493 aa5.42□□□□□ -1.54
RNF111-211ENST00000560952 DCAF8Q5TAQ9 597 aa5.42□□□□□ -1.54
RNF111-211ENST00000560952 RASEFQ8IZ41 740 aa5.42□□□□□ -1.54
RNF111-211ENST00000560952 KIF12Q96FN5 646 aa5.42□□□□□ -1.54
RNF111-211ENST00000560952 SGIP1Q9BQI5 828 aa5.41□□□□□ -1.54
RNF111-211ENST00000560952 CCDC61Q9Y6R9 512 aa5.4□□□□□ -1.54
RNF111-211ENST00000560952 ZNF787Q6DD87 383 aa5.39□□□□□ -1.55
RNF111-211ENST00000560952 C3orf67Q6ZVT6 689 aa5.38□□□□□ -1.55
RNF111-211ENST00000560952 ZNF775Q96BV0 537 aaPredicted RBP5.38□□□□□ -1.55
RNF111-211ENST00000560952 OCEL1Q9H607 264 aa5.38□□□□□ -1.55
RNF111-211ENST00000560952 CIZ1Q9ULV3 898 aaPredicted RBP5.37□□□□□ -1.55
RNF111-211ENST00000560952 CHRM1P11229 460 aaPredicted RBP5.36□□□□□ -1.55
RNF111-211ENST00000560952 A0A0G2JS52 829 aa5.36□□□□□ -1.55
RNF111-211ENST00000560952 ZNF710Q8N1W2 664 aa5.36□□□□□ -1.55
RNF111-211ENST00000560952 ANKRD13DQ6ZTN6 518 aa5.35□□□□□ -1.55
RNF111-211ENST00000560952 ANO8Q9HCE9 1232 aaPredicted RBP5.35□□□□□ -1.55
RNF111-211ENST00000560952 IRX5P78411 483 aaPredicted RBP5.34□□□□□ -1.55
RNF111-211ENST00000560952 ZNF467Q7Z7K2 595 aaPredicted RBP5.34□□□□□ -1.55
RNF111-211ENST00000560952 PCDHB13Q9Y5F0 798 aa5.33□□□□□ -1.56
RNF111-211ENST00000560952 VARS2Q5ST30 1063 aaKnown RBP5.33□□□□□ -1.56
RNF111-211ENST00000560952 L3MBTL3Q96JM7 780 aaPredicted RBP5.33□□□□□ -1.56
RNF111-211ENST00000560952 TAOK2Q9UL54 1235 aa5.33□□□□□ -1.56
RNF111-211ENST00000560952 RIMBP2O15034 1052 aa5.32□□□□□ -1.56
RNF111-211ENST00000560952 MAP3K13O43283 966 aa5.32□□□□□ -1.56
RNF111-211ENST00000560952 DOK7Q18PE1 504 aa5.32□□□□□ -1.56
RNF111-211ENST00000560952 PYGBP11216 843 aa5.31□□□□□ -1.56
RNF111-211ENST00000560952 TRPC6Q9Y210 931 aa5.29□□□□□ -1.56
RNF111-211ENST00000560952 ECM2O94769 699 aaPredicted RBP5.27□□□□□ -1.57
RNF111-211ENST00000560952 IFNL1Q8IU54 200 aa5.27□□□□□ -1.57
RNF111-211ENST00000560952 LSM11P83369 360 aaKnown RBP eCLIP5.26□□□□□ -1.57
RNF111-211ENST00000560952 PDAP1Q13442 181 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 302 ms