RNA–Protein interactions for RNA: ENST00000560934.1

LINS1-210, Transcript of lines homolog 1, human

TSL 4

Gene LINS1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINS1-210	ENST00000560934	TRIM41	Q8WV44	630 aa		10.93	□□□□□ -0.66
LINS1-210	ENST00000560934	PYGB	P11216	843 aa		10.89	□□□□□ -0.67
LINS1-210	ENST00000560934	RNF25	Q96BH1	459 aa	Predicted RBP	10.87	□□□□□ -0.67
LINS1-210	ENST00000560934	CHRM1	P11229	460 aa	Predicted RBP	10.84	□□□□□ -0.67
LINS1-210	ENST00000560934	RIOK3	O14730	519 aa	Known RBP	10.8	□□□□□ -0.68
LINS1-210	ENST00000560934	PAK3	O75914	559 aa	Predicted RBP	10.8	□□□□□ -0.68
LINS1-210	ENST00000560934	CHGA	P10645	457 aa	Known RBP	10.8	□□□□□ -0.68
LINS1-210	ENST00000560934	CCDC61	Q9Y6R9	512 aa		10.8	□□□□□ -0.68
LINS1-210	ENST00000560934	SLC24A1	O60721	1099 aa		10.78	□□□□□ -0.68
LINS1-210	ENST00000560934	CD44	P16070	742 aa	Known RBP	10.77	□□□□□ -0.69
LINS1-210	ENST00000560934	ZRANB1	Q9UGI0	708 aa		10.77	□□□□□ -0.69
LINS1-210	ENST00000560934	BBX	Q8WY36	941 aa	Predicted RBP	10.74	□□□□□ -0.69
LINS1-210	ENST00000560934	PCDHB8	Q9UN66	801 aa		10.73	□□□□□ -0.69
LINS1-210	ENST00000560934	PCDHB13	Q9Y5F0	798 aa		10.73	□□□□□ -0.69
LINS1-210	ENST00000560934	VGF	O15240	615 aa	Predicted RBP	10.72	□□□□□ -0.69
LINS1-210	ENST00000560934	PLCB2	Q00722	1185 aa		10.72	□□□□□ -0.69
LINS1-210	ENST00000560934	TAOK2	Q9UL54	1235 aa		10.71	□□□□□ -0.69
LINS1-210	ENST00000560934	C19orf67	A6NJJ6	358 aa		10.7	□□□□□ -0.7
LINS1-210	ENST00000560934	HS6ST3	Q8IZP7	471 aa		10.7	□□□□□ -0.7
LINS1-210	ENST00000560934	PHF12	Q96QT6	1004 aa		10.7	□□□□□ -0.7
LINS1-210	ENST00000560934	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.7	□□□□□ -0.7
LINS1-210	ENST00000560934	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.69	□□□□□ -0.7
LINS1-210	ENST00000560934	MAP3K13	O43283	966 aa		10.69	□□□□□ -0.7
LINS1-210	ENST00000560934	KIF12	Q96FN5	646 aa		10.69	□□□□□ -0.7
LINS1-210	ENST00000560934	ZFP91	Q96JP5	570 aa	Predicted RBP	10.69	□□□□□ -0.7
LINS1-210	ENST00000560934	STK25	O00506	426 aa		10.68	□□□□□ -0.7
LINS1-210	ENST00000560934	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.68	□□□□□ -0.7
LINS1-210	ENST00000560934	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.67	□□□□□ -0.7
LINS1-210	ENST00000560934	CFAP44	Q96MT7	982 aa		10.66	□□□□□ -0.7
LINS1-210	ENST00000560934	HAX1	O00165	279 aa		10.65	□□□□□ -0.7
LINS1-210	ENST00000560934	IFNL1	Q8IU54	200 aa		10.65	□□□□□ -0.7
LINS1-210	ENST00000560934	SGIP1	Q9BQI5	828 aa		10.65	□□□□□ -0.7
LINS1-210	ENST00000560934	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.65	□□□□□ -0.7
LINS1-210	ENST00000560934	STK24	Q9Y6E0	443 aa		10.65	□□□□□ -0.7
LINS1-210	ENST00000560934	ZNF579	Q8NAF0	562 aa	Known RBP	10.64	□□□□□ -0.71
LINS1-210	ENST00000560934	HAP1	P54257	671 aa	Predicted RBP	10.62	□□□□□ -0.71
LINS1-210	ENST00000560934	PDAP1	Q13442	181 aa	Known RBP	10.62	□□□□□ -0.71
LINS1-210	ENST00000560934	PSEN1	P49768	467 aa		10.61	□□□□□ -0.71
LINS1-210	ENST00000560934	EVX2	Q03828	476 aa		10.61	□□□□□ -0.71
LINS1-210	ENST00000560934	SPRYD3	Q8NCJ5	442 aa		10.61	□□□□□ -0.71
LINS1-210	ENST00000560934	NKX1-1	Q15270	411 aa	Predicted RBP	10.6	□□□□□ -0.71
LINS1-210	ENST00000560934	DNAJC5	Q9H3Z4	198 aa		10.57	□□□□□ -0.72
LINS1-210	ENST00000560934	MS4A3	Q96HJ5	214 aa		10.56	□□□□□ -0.72
LINS1-210	ENST00000560934	POTEH	Q6S545	545 aa		10.53	□□□□□ -0.72
LINS1-210	ENST00000560934	TRPC6	Q9Y210	931 aa		10.53	□□□□□ -0.72
LINS1-210	ENST00000560934	GTPBP6	O43824	516 aa	Predicted RBP	10.5	□□□□□ -0.73
LINS1-210	ENST00000560934	CABP2	Q9NPB3	220 aa		10.49	□□□□□ -0.73
LINS1-210	ENST00000560934	TSHZ2	Q9NRE2	1034 aa		10.49	□□□□□ -0.73
LINS1-210	ENST00000560934	GALR2	O43603	387 aa	Predicted RBP	10.48	□□□□□ -0.73
LINS1-210	ENST00000560934	TMEM106C	Q9BVX2	250 aa		10.47	□□□□□ -0.73
LINS1-210	ENST00000560934	EFCAB3	Q8N7B9	438 aa		10.46	□□□□□ -0.73
LINS1-210	ENST00000560934	MFRP	Q9BY79	579 aa		10.41	□□□□□ -0.74
LINS1-210	ENST00000560934	TIE1	P35590	1138 aa		10.4	□□□□□ -0.74
LINS1-210	ENST00000560934	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.4	□□□□□ -0.74
LINS1-210	ENST00000560934	TTLL13P	A6NNM8	815 aa		10.39	□□□□□ -0.75
LINS1-210	ENST00000560934	VSIG10	Q8N0Z9	540 aa		10.39	□□□□□ -0.75
LINS1-210	ENST00000560934	PHF8	Q9UPP1	1060 aa		10.39	□□□□□ -0.75
LINS1-210	ENST00000560934	KDM2A	Q9Y2K7	1162 aa		10.39	□□□□□ -0.75
LINS1-210	ENST00000560934	GABBR2	O75899	941 aa		10.38	□□□□□ -0.75
LINS1-210	ENST00000560934	GOLGA2	Q08379	1002 aa		10.38	□□□□□ -0.75
LINS1-210	ENST00000560934	RYDEN	Q9NUL5	291 aa	Known RBP	10.38	□□□□□ -0.75
LINS1-210	ENST00000560934	SOX12	O15370	315 aa		10.37	□□□□□ -0.75
LINS1-210	ENST00000560934	CLCN6	P51797	869 aa		10.37	□□□□□ -0.75
LINS1-210	ENST00000560934	NLRP6	P59044	892 aa		10.35	□□□□□ -0.75
LINS1-210	ENST00000560934	MKRN3	Q13064	507 aa	Known RBP	10.35	□□□□□ -0.75
LINS1-210	ENST00000560934	PPP1R37	O75864	691 aa		10.34	□□□□□ -0.75
LINS1-210	ENST00000560934	FBXO22	Q8NEZ5	403 aa		10.34	□□□□□ -0.75
LINS1-210	ENST00000560934	TRIM35	Q9UPQ4	493 aa		10.33	□□□□□ -0.76
LINS1-210	ENST00000560934	ATN1	P54259	1190 aa	Predicted RBP	10.32	□□□□□ -0.76
LINS1-210	ENST00000560934	ATMIN	O43313	823 aa	Predicted RBP	10.3	□□□□□ -0.76
LINS1-210	ENST00000560934	MS4A4A	Q96JQ5	239 aa		10.29	□□□□□ -0.76
LINS1-210	ENST00000560934	ASTL	Q6HA08	431 aa	Predicted RBP	10.27	□□□□□ -0.77
LINS1-210	ENST00000560934	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.27	□□□□□ -0.77
LINS1-210	ENST00000560934	CADPS2	Q86UW7	1296 aa		10.26	□□□□□ -0.77
LINS1-210	ENST00000560934	DCBLD2	Q96PD2	775 aa		10.26	□□□□□ -0.77
LINS1-210	ENST00000560934	PELP1	Q8IZL8	1130 aa	Known RBP	10.23	□□□□□ -0.77
LINS1-210	ENST00000560934	SP7	Q8TDD2	431 aa	Predicted RBP	10.23	□□□□□ -0.77
LINS1-210	ENST00000560934	DPY19L2	Q6NUT2	758 aa		10.22	□□□□□ -0.77
LINS1-210	ENST00000560934	ILDR1	Q86SU0	546 aa	Predicted RBP	10.19	□□□□□ -0.78
LINS1-210	ENST00000560934	POTEI	P0CG38	1075 aa		10.17	□□□□□ -0.78
LINS1-210	ENST00000560934	IRX5	P78411	483 aa	Predicted RBP	10.17	□□□□□ -0.78
LINS1-210	ENST00000560934	IER5L	Q5T953	404 aa		10.16	□□□□□ -0.78
LINS1-210	ENST00000560934	PDCD7	Q8N8D1	485 aa	Known RBP	10.16	□□□□□ -0.78
LINS1-210	ENST00000560934	OCEL1	Q9H607	264 aa		10.16	□□□□□ -0.78
LINS1-210	ENST00000560934	PLCG2	P16885	1265 aa		10.13	□□□□□ -0.79
LINS1-210	ENST00000560934	SEC24B	O95487	1268 aa		10.12	□□□□□ -0.79
LINS1-210	ENST00000560934	WDR70	Q9NW82	654 aa		10.12	□□□□□ -0.79
LINS1-210	ENST00000560934	COLQ	Q9Y215	455 aa	Predicted RBP	10.12	□□□□□ -0.79
LINS1-210	ENST00000560934	SLC39A7	Q92504	469 aa		10.11	□□□□□ -0.79
LINS1-210	ENST00000560934	POTEF	A5A3E0	1075 aa		10.09	□□□□□ -0.79
LINS1-210	ENST00000560934	NCKAP5L	Q9HCH0	1330 aa		10.08	□□□□□ -0.8
LINS1-210	ENST00000560934	C7	P10643	843 aa		10.08	□□□□□ -0.8
LINS1-210	ENST00000560934	MICALL2	Q8IY33	904 aa		10.08	□□□□□ -0.8
LINS1-210	ENST00000560934	BCAN	Q96GW7	911 aa		10.08	□□□□□ -0.8
LINS1-210	ENST00000560934	LARP6	Q9BRS8	491 aa	Known RBP	10.08	□□□□□ -0.8
LINS1-210	ENST00000560934	PDE4A	P27815	886 aa		10.07	□□□□□ -0.8
LINS1-210	ENST00000560934	METRN	Q9UJH8	293 aa		10.07	□□□□□ -0.8
LINS1-210	ENST00000560934	BOLA1	Q9Y3E2	137 aa		10.07	□□□□□ -0.8
LINS1-210	ENST00000560934		G3V3G9	751 aa		10.05	□□□□□ -0.8
LINS1-210	ENST00000560934	CRISPLD2	Q9H0B8	497 aa		10.04	□□□□□ -0.8

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