RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 CCDC61Q9Y6R9 512 aa14.05□□□□□ -0.16
TRIP4-209ENST00000560475 NUBP1P53384 320 aa14.02□□□□□ -0.17
TRIP4-209ENST00000560475 VASPP50552 380 aaPredicted RBP14.01□□□□□ -0.17
TRIP4-209ENST00000560475 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
TRIP4-209ENST00000560475 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
TRIP4-209ENST00000560475 KLHL34Q8N239 644 aa13.93□□□□□ -0.18
TRIP4-209ENST00000560475 MAP3K13O43283 966 aa13.91□□□□□ -0.18
TRIP4-209ENST00000560475 LHX8Q68G74 356 aa13.89□□□□□ -0.19
TRIP4-209ENST00000560475 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
TRIP4-209ENST00000560475 DCAF8Q5TAQ9 597 aa13.87□□□□□ -0.19
TRIP4-209ENST00000560475 PELP1Q8IZL8 1130 aaKnown RBP13.85□□□□□ -0.19
TRIP4-209ENST00000560475 TRPC6Q9Y210 931 aa13.83□□□□□ -0.2
TRIP4-209ENST00000560475 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
TRIP4-209ENST00000560475 ASTLQ6HA08 431 aaPredicted RBP13.81□□□□□ -0.2
TRIP4-209ENST00000560475 IFNLR1Q8IU57 520 aaPredicted RBP13.8□□□□□ -0.2
TRIP4-209ENST00000560475 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
TRIP4-209ENST00000560475 PYGBP11216 843 aa13.76□□□□□ -0.21
TRIP4-209ENST00000560475 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
TRIP4-209ENST00000560475 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
TRIP4-209ENST00000560475 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
TRIP4-209ENST00000560475 IFNL1Q8IU54 200 aa13.73□□□□□ -0.21
TRIP4-209ENST00000560475 TIE1P35590 1138 aa13.71□□□□□ -0.21
TRIP4-209ENST00000560475 GSE1Q14687 1217 aa13.7□□□□□ -0.22
TRIP4-209ENST00000560475 SPOCK2Q92563 424 aa13.7□□□□□ -0.22
TRIP4-209ENST00000560475 METRNQ9UJH8 293 aa13.69□□□□□ -0.22
TRIP4-209ENST00000560475 POTEB2H3BUK9 544 aa13.68□□□□□ -0.22
TRIP4-209ENST00000560475 SLC39A7Q92504 469 aa13.68□□□□□ -0.22
TRIP4-209ENST00000560475 TTLL13PA6NNM8 815 aa13.67□□□□□ -0.22
TRIP4-209ENST00000560475 C7P10643 843 aa13.67□□□□□ -0.22
TRIP4-209ENST00000560475 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
TRIP4-209ENST00000560475 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
TRIP4-209ENST00000560475 TMEM106CQ9BVX2 250 aa13.6□□□□□ -0.23
TRIP4-209ENST00000560475 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
TRIP4-209ENST00000560475 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
TRIP4-209ENST00000560475 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
TRIP4-209ENST00000560475 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
TRIP4-209ENST00000560475 POTEJP0CG39 1038 aa13.52□□□□□ -0.25
TRIP4-209ENST00000560475 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
TRIP4-209ENST00000560475 SEC24BO95487 1268 aa13.5□□□□□ -0.25
TRIP4-209ENST00000560475 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
TRIP4-209ENST00000560475 IER5LQ5T953 404 aa13.46□□□□□ -0.25
TRIP4-209ENST00000560475 PSEN1P49768 467 aa13.42□□□□□ -0.26
TRIP4-209ENST00000560475 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
TRIP4-209ENST00000560475 PLCG2P16885 1265 aa13.37□□□□□ -0.27
TRIP4-209ENST00000560475 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
TRIP4-209ENST00000560475 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
TRIP4-209ENST00000560475 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
TRIP4-209ENST00000560475 SCUBE2Q9NQ36 999 aa13.35□□□□□ -0.27
TRIP4-209ENST00000560475 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
TRIP4-209ENST00000560475 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
TRIP4-209ENST00000560475 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
TRIP4-209ENST00000560475 CABP2Q9NPB3 220 aa13.26□□□□□ -0.29
TRIP4-209ENST00000560475 RNF25Q96BH1 459 aaPredicted RBP13.25□□□□□ -0.29
TRIP4-209ENST00000560475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRIP4-209ENST00000560475 RIOK3O14730 519 aaKnown RBP13.22□□□□□ -0.29
TRIP4-209ENST00000560475 PDCD7Q8N8D1 485 aaKnown RBP13.22□□□□□ -0.29
TRIP4-209ENST00000560475 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
TRIP4-209ENST00000560475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
TRIP4-209ENST00000560475 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
TRIP4-209ENST00000560475 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
TRIP4-209ENST00000560475 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
TRIP4-209ENST00000560475 VGFO15240 615 aaPredicted RBP13.14□□□□□ -0.31
TRIP4-209ENST00000560475 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
TRIP4-209ENST00000560475 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
TRIP4-209ENST00000560475 PKD2Q13563 968 aa13.12□□□□□ -0.31
TRIP4-209ENST00000560475 ILDR1Q86SU0 546 aaPredicted RBP13.12□□□□□ -0.31
TRIP4-209ENST00000560475 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
TRIP4-209ENST00000560475 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
TRIP4-209ENST00000560475 POTEMA6NI47 508 aa13.06□□□□□ -0.32
TRIP4-209ENST00000560475 LCE2DQ5TA82 110 aaPredicted RBP13.06□□□□□ -0.32
TRIP4-209ENST00000560475 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
TRIP4-209ENST00000560475 RGL2O15211 777 aa13.04□□□□□ -0.32
TRIP4-209ENST00000560475 POTEGQ6S5H5 508 aa13.04□□□□□ -0.32
TRIP4-209ENST00000560475 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.33
TRIP4-209ENST00000560475 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
TRIP4-209ENST00000560475 BOLA1Q9Y3E2 137 aa13.01□□□□□ -0.33
TRIP4-209ENST00000560475 G3V3G9 751 aa13□□□□□ -0.33
TRIP4-209ENST00000560475 STK24Q9Y6E0 443 aa13□□□□□ -0.33
TRIP4-209ENST00000560475 SOX12O15370 315 aa12.99□□□□□ -0.33
TRIP4-209ENST00000560475 STK25O00506 426 aa12.98□□□□□ -0.33
TRIP4-209ENST00000560475 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
TRIP4-209ENST00000560475 MS4A4AQ96JQ5 239 aa12.94□□□□□ -0.34
TRIP4-209ENST00000560475 ST18O60284 1047 aa12.93□□□□□ -0.34
TRIP4-209ENST00000560475 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
TRIP4-209ENST00000560475 SNPHO15079 494 aa12.9□□□□□ -0.34
TRIP4-209ENST00000560475 NLRP6P59044 892 aa12.88□□□□□ -0.35
TRIP4-209ENST00000560475 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
TRIP4-209ENST00000560475 FBXO22Q8NEZ5 403 aa12.86□□□□□ -0.35
TRIP4-209ENST00000560475 MFRPQ9BY79 579 aa12.86□□□□□ -0.35
TRIP4-209ENST00000560475 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
TRIP4-209ENST00000560475 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
TRIP4-209ENST00000560475 MARVELD3Q96A59 401 aa12.79□□□□□ -0.36
TRIP4-209ENST00000560475 PCDH10Q9P2E7 1040 aa12.78□□□□□ -0.36
TRIP4-209ENST00000560475 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
TRIP4-209ENST00000560475 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
TRIP4-209ENST00000560475 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
TRIP4-209ENST00000560475 HS6ST3Q8IZP7 471 aa12.72□□□□□ -0.37
TRIP4-209ENST00000560475 PPP1R37O75864 691 aa12.68□□□□□ -0.38
TRIP4-209ENST00000560475 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
TRIP4-209ENST00000560475 EMP3P54852 163 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms