RNA–Protein interactions for RNA: ENST00000560191.1

TCF12-216, Transcript of transcription factor 12, humanhuman

TSL 2

Gene TCF12, Length 1,205 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-216ENST00000560191 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
TCF12-216ENST00000560191 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
TCF12-216ENST00000560191 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
TCF12-216ENST00000560191 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
TCF12-216ENST00000560191 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
TCF12-216ENST00000560191 NUBP1P53384 320 aa13.41□□□□□ -0.26
TCF12-216ENST00000560191 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
TCF12-216ENST00000560191 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
TCF12-216ENST00000560191 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
TCF12-216ENST00000560191 POTEB2H3BUK9 544 aa13.31□□□□□ -0.28
TCF12-216ENST00000560191 ASTLQ6HA08 431 aaPredicted RBP13.31□□□□□ -0.28
TCF12-216ENST00000560191 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
TCF12-216ENST00000560191 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
TCF12-216ENST00000560191 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
TCF12-216ENST00000560191 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
TCF12-216ENST00000560191 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
TCF12-216ENST00000560191 GSE1Q14687 1217 aa13.26□□□□□ -0.29
TCF12-216ENST00000560191 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
TCF12-216ENST00000560191 OTUD5Q96G74 571 aa13.25□□□□□ -0.29
TCF12-216ENST00000560191 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
TCF12-216ENST00000560191 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
TCF12-216ENST00000560191 MAP3K13O43283 966 aa13.22□□□□□ -0.29
TCF12-216ENST00000560191 SLC39A7Q92504 469 aa13.21□□□□□ -0.29
TCF12-216ENST00000560191 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
TCF12-216ENST00000560191 PKD2Q13563 968 aa13.2□□□□□ -0.3
TCF12-216ENST00000560191 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
TCF12-216ENST00000560191 C7P10643 843 aa13.19□□□□□ -0.3
TCF12-216ENST00000560191 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
TCF12-216ENST00000560191 PYGBP11216 843 aa13.13□□□□□ -0.31
TCF12-216ENST00000560191 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
TCF12-216ENST00000560191 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
TCF12-216ENST00000560191 TIE1P35590 1138 aa13.12□□□□□ -0.31
TCF12-216ENST00000560191 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
TCF12-216ENST00000560191 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
TCF12-216ENST00000560191 PCDHB13Q9Y5F0 798 aa13.07□□□□□ -0.32
TCF12-216ENST00000560191 POTEFA5A3E0 1075 aa13.06□□□□□ -0.32
TCF12-216ENST00000560191 TTLL13PA6NNM8 815 aa13.06□□□□□ -0.32
TCF12-216ENST00000560191 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
TCF12-216ENST00000560191 IFNL1Q8IU54 200 aa13.01□□□□□ -0.33
TCF12-216ENST00000560191 RGL2O15211 777 aa13□□□□□ -0.33
TCF12-216ENST00000560191 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
TCF12-216ENST00000560191 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
TCF12-216ENST00000560191 TRIM35Q9UPQ4 493 aa12.97□□□□□ -0.33
TCF12-216ENST00000560191 COLQQ9Y215 455 aaPredicted RBP12.96□□□□□ -0.33
TCF12-216ENST00000560191 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
TCF12-216ENST00000560191 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
TCF12-216ENST00000560191 SCUBE2Q9NQ36 999 aa12.93□□□□□ -0.34
TCF12-216ENST00000560191 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
TCF12-216ENST00000560191 IER5LQ5T953 404 aa12.92□□□□□ -0.34
TCF12-216ENST00000560191 SEC24BO95487 1268 aa12.91□□□□□ -0.34
TCF12-216ENST00000560191 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
TCF12-216ENST00000560191 POTEMA6NI47 508 aa12.88□□□□□ -0.35
TCF12-216ENST00000560191 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
TCF12-216ENST00000560191 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
TCF12-216ENST00000560191 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
TCF12-216ENST00000560191 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
TCF12-216ENST00000560191 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
TCF12-216ENST00000560191 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
TCF12-216ENST00000560191 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
TCF12-216ENST00000560191 PSEN1P49768 467 aa12.8□□□□□ -0.36
TCF12-216ENST00000560191 ZFP91Q96JP5 570 aaPredicted RBP12.8□□□□□ -0.36
TCF12-216ENST00000560191 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
TCF12-216ENST00000560191 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
TCF12-216ENST00000560191 PLCG2P16885 1265 aa12.77□□□□□ -0.37
TCF12-216ENST00000560191 FAM163AQ96GL9 167 aaPredicted RBP12.77□□□□□ -0.37
TCF12-216ENST00000560191 STK25O00506 426 aa12.74□□□□□ -0.37
TCF12-216ENST00000560191 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
TCF12-216ENST00000560191 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
TCF12-216ENST00000560191 HS6ST3Q8IZP7 471 aa12.71□□□□□ -0.37
TCF12-216ENST00000560191 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
TCF12-216ENST00000560191 OCEL1Q9H607 264 aa12.7□□□□□ -0.38
TCF12-216ENST00000560191 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
TCF12-216ENST00000560191 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
TCF12-216ENST00000560191 PCDH10Q9P2E7 1040 aa12.66□□□□□ -0.38
TCF12-216ENST00000560191 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
TCF12-216ENST00000560191 EFCAB3Q8N7B9 438 aa12.59□□□□□ -0.39
TCF12-216ENST00000560191 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
TCF12-216ENST00000560191 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
TCF12-216ENST00000560191 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
TCF12-216ENST00000560191 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
TCF12-216ENST00000560191 ST18O60284 1047 aa12.54□□□□□ -0.4
TCF12-216ENST00000560191 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
TCF12-216ENST00000560191 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
TCF12-216ENST00000560191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.51□□□□□ -0.41
TCF12-216ENST00000560191 SOX12O15370 315 aa12.5□□□□□ -0.41
TCF12-216ENST00000560191 ILDR1Q86SU0 546 aaPredicted RBP12.49□□□□□ -0.41
TCF12-216ENST00000560191 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
TCF12-216ENST00000560191 MFRPQ9BY79 579 aa12.48□□□□□ -0.41
TCF12-216ENST00000560191 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
TCF12-216ENST00000560191 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
TCF12-216ENST00000560191 NLRP6P59044 892 aa12.45□□□□□ -0.42
TCF12-216ENST00000560191 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
TCF12-216ENST00000560191 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
TCF12-216ENST00000560191 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
TCF12-216ENST00000560191 SNPHO15079 494 aa12.42□□□□□ -0.42
TCF12-216ENST00000560191 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
TCF12-216ENST00000560191 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
TCF12-216ENST00000560191 MS4A4AQ96JQ5 239 aa12.41□□□□□ -0.42
TCF12-216ENST00000560191 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
TCF12-216ENST00000560191 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms