RNA–Protein interactions for RNA: ENST00000559906.1

PSMA4-214, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-214ENST00000559906 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
PSMA4-214ENST00000559906 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
PSMA4-214ENST00000559906 SCUBE2Q9NQ36 999 aa10.27□□□□□ -0.77
PSMA4-214ENST00000559906 ASTLQ6HA08 431 aaPredicted RBP10.26□□□□□ -0.77
PSMA4-214ENST00000559906 ATMINO43313 823 aaPredicted RBP10.22□□□□□ -0.77
PSMA4-214ENST00000559906 POTEJP0CG39 1038 aa10.21□□□□□ -0.77
PSMA4-214ENST00000559906 LCE2DQ5TA82 110 aaPredicted RBP10.19□□□□□ -0.78
PSMA4-214ENST00000559906 MS4A3Q96HJ5 214 aa10.19□□□□□ -0.78
PSMA4-214ENST00000559906 CDAN1Q8IWY9 1227 aa10.1□□□□□ -0.79
PSMA4-214ENST00000559906 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
PSMA4-214ENST00000559906 ATN1P54259 1190 aaPredicted RBP10.08□□□□□ -0.8
PSMA4-214ENST00000559906 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
PSMA4-214ENST00000559906 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
PSMA4-214ENST00000559906 SEC24BO95487 1268 aa10□□□□□ -0.81
PSMA4-214ENST00000559906 POTEFA5A3E0 1075 aa9.97□□□□□ -0.81
PSMA4-214ENST00000559906 BMP2KQ9NSY1 1161 aaPredicted RBP9.97□□□□□ -0.81
PSMA4-214ENST00000559906 CCDC61Q9Y6R9 512 aa9.97□□□□□ -0.81
PSMA4-214ENST00000559906 TIE1P35590 1138 aa9.95□□□□□ -0.82
PSMA4-214ENST00000559906 KIF12Q96FN5 646 aa9.95□□□□□ -0.82
PSMA4-214ENST00000559906 ST18O60284 1047 aa9.89□□□□□ -0.83
PSMA4-214ENST00000559906 COLQQ9Y215 455 aaPredicted RBP9.89□□□□□ -0.83
PSMA4-214ENST00000559906 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
PSMA4-214ENST00000559906 SLAIN1Q8ND83 568 aa9.88□□□□□ -0.83
PSMA4-214ENST00000559906 MAP3K13O43283 966 aa9.87□□□□□ -0.83
PSMA4-214ENST00000559906 TRPC6Q9Y210 931 aa9.87□□□□□ -0.83
PSMA4-214ENST00000559906 IER5LQ5T953 404 aa9.86□□□□□ -0.83
PSMA4-214ENST00000559906 TTLL13PA6NNM8 815 aa9.85□□□□□ -0.83
PSMA4-214ENST00000559906 SPNS2Q8IVW8 549 aa9.84□□□□□ -0.83
PSMA4-214ENST00000559906 PLEKHG5O94827 1062 aa9.83□□□□□ -0.84
PSMA4-214ENST00000559906 TMEM121BQ9BXQ6 578 aaPredicted RBP9.81□□□□□ -0.84
PSMA4-214ENST00000559906 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
PSMA4-214ENST00000559906 SNPHO15079 494 aa9.76□□□□□ -0.85
PSMA4-214ENST00000559906 SGIP1Q9BQI5 828 aa9.76□□□□□ -0.85
PSMA4-214ENST00000559906 PLCG2P16885 1265 aa9.74□□□□□ -0.85
PSMA4-214ENST00000559906 PCDHB13Q9Y5F0 798 aa9.73□□□□□ -0.85
PSMA4-214ENST00000559906 RASEFQ8IZ41 740 aa9.71□□□□□ -0.86
PSMA4-214ENST00000559906 MIER1Q8N108 512 aa9.69□□□□□ -0.86
PSMA4-214ENST00000559906 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
PSMA4-214ENST00000559906 PROM2Q8N271 834 aa9.65□□□□□ -0.86
PSMA4-214ENST00000559906 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
PSMA4-214ENST00000559906 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.65□□□□□ -0.86
PSMA4-214ENST00000559906 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
PSMA4-214ENST00000559906 FKBP8Q14318 412 aa9.61□□□□□ -0.87
PSMA4-214ENST00000559906 IFNL1Q8IU54 200 aa9.61□□□□□ -0.87
PSMA4-214ENST00000559906 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
PSMA4-214ENST00000559906 EMP3P54852 163 aa9.58□□□□□ -0.88
PSMA4-214ENST00000559906 ZBTB47Q9UFB7 747 aaPredicted RBP9.58□□□□□ -0.88
PSMA4-214ENST00000559906 PLCD3Q8N3E9 789 aa9.56□□□□□ -0.88
PSMA4-214ENST00000559906 FAM212AQ96EL1 285 aa9.52□□□□□ -0.89
PSMA4-214ENST00000559906 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
PSMA4-214ENST00000559906 HS3ST6Q96QI5 342 aa9.51□□□□□ -0.89
PSMA4-214ENST00000559906 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
PSMA4-214ENST00000559906 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
PSMA4-214ENST00000559906 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
PSMA4-214ENST00000559906 NUBP1P53384 320 aa9.48□□□□□ -0.89
PSMA4-214ENST00000559906 L3MBTL3Q96JM7 780 aaPredicted RBP9.44□□□□□ -0.9
PSMA4-214ENST00000559906 POTEB3A0JP26 581 aa9.41□□□□□ -0.9
PSMA4-214ENST00000559906 POTEBQ6S5H4 581 aa9.41□□□□□ -0.9
PSMA4-214ENST00000559906 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
PSMA4-214ENST00000559906 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
PSMA4-214ENST00000559906 RNF166Q96A37 237 aaPredicted RBP9.37□□□□□ -0.91
PSMA4-214ENST00000559906 PDCD7Q8N8D1 485 aaKnown RBP9.36□□□□□ -0.91
PSMA4-214ENST00000559906 PYGBP11216 843 aa9.35□□□□□ -0.91
PSMA4-214ENST00000559906 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
PSMA4-214ENST00000559906 PCDHB8Q9UN66 801 aa9.33□□□□□ -0.92
PSMA4-214ENST00000559906 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
PSMA4-214ENST00000559906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.3□□□□□ -0.92
PSMA4-214ENST00000559906 ERBB3P21860 1342 aa9.3□□□□□ -0.92
PSMA4-214ENST00000559906 FBXO3Q9UK99 471 aa9.29□□□□□ -0.92
PSMA4-214ENST00000559906 MYT1LQ9UL68 1186 aa9.29□□□□□ -0.92
PSMA4-214ENST00000559906 G3V3G9 751 aa9.28□□□□□ -0.92
PSMA4-214ENST00000559906 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
PSMA4-214ENST00000559906 ZNF467Q7Z7K2 595 aaPredicted RBP9.26□□□□□ -0.93
PSMA4-214ENST00000559906 DOK7Q18PE1 504 aa9.24□□□□□ -0.93
PSMA4-214ENST00000559906 HOXB3P14651 431 aaPredicted RBP9.22□□□□□ -0.93
PSMA4-214ENST00000559906 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
PSMA4-214ENST00000559906 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
PSMA4-214ENST00000559906 PTGER2P43116 358 aa9.21□□□□□ -0.94
PSMA4-214ENST00000559906 VARS2Q5ST30 1063 aaKnown RBP9.18□□□□□ -0.94
PSMA4-214ENST00000559906 BOLA1Q9Y3E2 137 aa9.18□□□□□ -0.94
PSMA4-214ENST00000559906 PSEN1P49768 467 aa9.15□□□□□ -0.94
PSMA4-214ENST00000559906 GSE1Q14687 1217 aa9.15□□□□□ -0.94
PSMA4-214ENST00000559906 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
PSMA4-214ENST00000559906 ZNF687Q8N1G0 1237 aa9.14□□□□□ -0.95
PSMA4-214ENST00000559906 DPY19L2Q6NUT2 758 aa9.13□□□□□ -0.95
PSMA4-214ENST00000559906 CHRM1P11229 460 aaPredicted RBP9.09□□□□□ -0.95
PSMA4-214ENST00000559906 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
PSMA4-214ENST00000559906 PDAP1Q13442 181 aaKnown RBP9.07□□□□□ -0.96
PSMA4-214ENST00000559906 IFNLR1Q8IU57 520 aaPredicted RBP9.07□□□□□ -0.96
PSMA4-214ENST00000559906 ANKRD13DQ6ZTN6 518 aa9.06□□□□□ -0.96
PSMA4-214ENST00000559906 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
PSMA4-214ENST00000559906 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
PSMA4-214ENST00000559906 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
PSMA4-214ENST00000559906 GPR153Q6NV75 609 aa8.98□□□□□ -0.97
PSMA4-214ENST00000559906 SPOCK2Q92563 424 aa8.98□□□□□ -0.97
PSMA4-214ENST00000559906 LSM11P83369 360 aaKnown RBP eCLIP8.96□□□□□ -0.98
PSMA4-214ENST00000559906 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
PSMA4-214ENST00000559906 ZNF316A6NFI3 1004 aaPredicted RBP8.9□□□□□ -0.98
PSMA4-214ENST00000559906 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
PSMA4-214ENST00000559906 MICALL2Q8IY33 904 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms