RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
CTDSPL2-207ENST00000559738 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
CTDSPL2-207ENST00000559738 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
CTDSPL2-207ENST00000559738 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
CTDSPL2-207ENST00000559738 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
CTDSPL2-207ENST00000559738 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
CTDSPL2-207ENST00000559738 MS4A3Q96HJ5 214 aa12.82□□□□□ -0.36
CTDSPL2-207ENST00000559738 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
CTDSPL2-207ENST00000559738 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
CTDSPL2-207ENST00000559738 MAP3K13O43283 966 aa12.75□□□□□ -0.37
CTDSPL2-207ENST00000559738 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
CTDSPL2-207ENST00000559738 LHX8Q68G74 356 aa12.68□□□□□ -0.38
CTDSPL2-207ENST00000559738 PYGBP11216 843 aa12.67□□□□□ -0.38
CTDSPL2-207ENST00000559738 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
CTDSPL2-207ENST00000559738 GSE1Q14687 1217 aa12.66□□□□□ -0.38
CTDSPL2-207ENST00000559738 TRPC6Q9Y210 931 aa12.66□□□□□ -0.38
CTDSPL2-207ENST00000559738 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
CTDSPL2-207ENST00000559738 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
CTDSPL2-207ENST00000559738 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
CTDSPL2-207ENST00000559738 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
CTDSPL2-207ENST00000559738 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
CTDSPL2-207ENST00000559738 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-207ENST00000559738 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
CTDSPL2-207ENST00000559738 TIE1P35590 1138 aa12.57□□□□□ -0.4
CTDSPL2-207ENST00000559738 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-207ENST00000559738 TTLL13PA6NNM8 815 aa12.54□□□□□ -0.4
CTDSPL2-207ENST00000559738 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
CTDSPL2-207ENST00000559738 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
CTDSPL2-207ENST00000559738 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
CTDSPL2-207ENST00000559738 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
CTDSPL2-207ENST00000559738 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
CTDSPL2-207ENST00000559738 C7P10643 843 aa12.48□□□□□ -0.41
CTDSPL2-207ENST00000559738 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
CTDSPL2-207ENST00000559738 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
CTDSPL2-207ENST00000559738 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
CTDSPL2-207ENST00000559738 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
CTDSPL2-207ENST00000559738 PSEN1P49768 467 aa12.36□□□□□ -0.43
CTDSPL2-207ENST00000559738 PKD2Q13563 968 aa12.36□□□□□ -0.43
CTDSPL2-207ENST00000559738 IER5LQ5T953 404 aa12.36□□□□□ -0.43
CTDSPL2-207ENST00000559738 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
CTDSPL2-207ENST00000559738 SEC24BO95487 1268 aa12.35□□□□□ -0.43
CTDSPL2-207ENST00000559738 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
CTDSPL2-207ENST00000559738 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
CTDSPL2-207ENST00000559738 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
CTDSPL2-207ENST00000559738 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
CTDSPL2-207ENST00000559738 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
CTDSPL2-207ENST00000559738 PLCG2P16885 1265 aa12.27□□□□□ -0.45
CTDSPL2-207ENST00000559738 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
CTDSPL2-207ENST00000559738 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
CTDSPL2-207ENST00000559738 IRX5P78411 483 aaPredicted RBP12.26□□□□□ -0.45
CTDSPL2-207ENST00000559738 RIOK3O14730 519 aaKnown RBP12.25□□□□□ -0.45
CTDSPL2-207ENST00000559738 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
CTDSPL2-207ENST00000559738 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
CTDSPL2-207ENST00000559738 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
CTDSPL2-207ENST00000559738 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
CTDSPL2-207ENST00000559738 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
CTDSPL2-207ENST00000559738 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
CTDSPL2-207ENST00000559738 RGL2O15211 777 aa12.19□□□□□ -0.46
CTDSPL2-207ENST00000559738 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
CTDSPL2-207ENST00000559738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL2-207ENST00000559738 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL2-207ENST00000559738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.462e-7■□□□□ 9.4
CTDSPL2-207ENST00000559738 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-207ENST00000559738 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-207ENST00000559738 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
CTDSPL2-207ENST00000559738 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
CTDSPL2-207ENST00000559738 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
CTDSPL2-207ENST00000559738 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
CTDSPL2-207ENST00000559738 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
CTDSPL2-207ENST00000559738 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
CTDSPL2-207ENST00000559738 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
CTDSPL2-207ENST00000559738 STK25O00506 426 aa12.03□□□□□ -0.48
CTDSPL2-207ENST00000559738 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
CTDSPL2-207ENST00000559738 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
CTDSPL2-207ENST00000559738 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
CTDSPL2-207ENST00000559738 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
CTDSPL2-207ENST00000559738 SOX12O15370 315 aa11.98□□□□□ -0.49
CTDSPL2-207ENST00000559738 PHF8Q9UPP1 1060 aa11.97□□□□□ -0.49
CTDSPL2-207ENST00000559738 POTEMA6NI47 508 aa11.96□□□□□ -0.49
CTDSPL2-207ENST00000559738 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
CTDSPL2-207ENST00000559738 G3V3G9 751 aa11.95□□□□□ -0.5
CTDSPL2-207ENST00000559738 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
CTDSPL2-207ENST00000559738 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
CTDSPL2-207ENST00000559738 NLRP6P59044 892 aa11.9□□□□□ -0.5
CTDSPL2-207ENST00000559738 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
CTDSPL2-207ENST00000559738 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
CTDSPL2-207ENST00000559738 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
CTDSPL2-207ENST00000559738 MFRPQ9BY79 579 aa11.89□□□□□ -0.51
CTDSPL2-207ENST00000559738 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
CTDSPL2-207ENST00000559738 FBXO22Q8NEZ5 403 aa11.88□□□□□ -0.51
CTDSPL2-207ENST00000559738 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL2-207ENST00000559738 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
CTDSPL2-207ENST00000559738 TMEM121BQ9BXQ6 578 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL2-207ENST00000559738 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
CTDSPL2-207ENST00000559738 SNPHO15079 494 aa11.78□□□□□ -0.52
CTDSPL2-207ENST00000559738 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
CTDSPL2-207ENST00000559738 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
CTDSPL2-207ENST00000559738 ST18O60284 1047 aa11.77□□□□□ -0.53
CTDSPL2-207ENST00000559738 TMEM92Q6UXU6 159 aa11.74□□□□□ -0.53
CTDSPL2-207ENST00000559738 PPP1R37O75864 691 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms