RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 LHX8Q68G74 356 aa12.1□□□□□ -0.47
ZEB1-215ENST00000559476 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
ZEB1-215ENST00000559476 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
ZEB1-215ENST00000559476 NUBP1P53384 320 aa12.03□□□□□ -0.48
ZEB1-215ENST00000559476 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
ZEB1-215ENST00000559476 FAM212AQ96EL1 285 aa12□□□□□ -0.49
ZEB1-215ENST00000559476 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
ZEB1-215ENST00000559476 NISCHQ9Y2I1 1504 aa11.99□□□□□ -0.49
ZEB1-215ENST00000559476 VASPP50552 380 aaPredicted RBP11.98□□□□□ -0.49
ZEB1-215ENST00000559476 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
ZEB1-215ENST00000559476 MAP3K13O43283 966 aa11.95□□□□□ -0.5
ZEB1-215ENST00000559476 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
ZEB1-215ENST00000559476 TIE1P35590 1138 aa11.91□□□□□ -0.5
ZEB1-215ENST00000559476 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
ZEB1-215ENST00000559476 C7P10643 843 aa11.9□□□□□ -0.5
ZEB1-215ENST00000559476 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
ZEB1-215ENST00000559476 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
ZEB1-215ENST00000559476 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
ZEB1-215ENST00000559476 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
ZEB1-215ENST00000559476 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
ZEB1-215ENST00000559476 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
ZEB1-215ENST00000559476 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
ZEB1-215ENST00000559476 GSE1Q14687 1217 aa11.84□□□□□ -0.51
ZEB1-215ENST00000559476 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
ZEB1-215ENST00000559476 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
ZEB1-215ENST00000559476 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
ZEB1-215ENST00000559476 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
ZEB1-215ENST00000559476 PYGBP11216 843 aa11.75□□□□□ -0.53
ZEB1-215ENST00000559476 IER5LQ5T953 404 aa11.74□□□□□ -0.53
ZEB1-215ENST00000559476 MAMSTRQ6ZN01 415 aa11.74□□□□□ -0.53
ZEB1-215ENST00000559476 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
ZEB1-215ENST00000559476 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
ZEB1-215ENST00000559476 CHRM1P11229 460 aaPredicted RBP11.72□□□□□ -0.53
ZEB1-215ENST00000559476 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
ZEB1-215ENST00000559476 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
ZEB1-215ENST00000559476 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
ZEB1-215ENST00000559476 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
ZEB1-215ENST00000559476 SEC24BO95487 1268 aa11.68□□□□□ -0.54
ZEB1-215ENST00000559476 SCUBE2Q9NQ36 999 aa11.65□□□□□ -0.54
ZEB1-215ENST00000559476 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
ZEB1-215ENST00000559476 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
ZEB1-215ENST00000559476 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
ZEB1-215ENST00000559476 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
ZEB1-215ENST00000559476 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
ZEB1-215ENST00000559476 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
ZEB1-215ENST00000559476 PLCG2P16885 1265 aa11.58□□□□□ -0.56
ZEB1-215ENST00000559476 IRX5P78411 483 aaPredicted RBP11.54□□□□□ -0.56
ZEB1-215ENST00000559476 PSEN1P49768 467 aa11.53□□□□□ -0.56
ZEB1-215ENST00000559476 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
ZEB1-215ENST00000559476 OCEL1Q9H607 264 aa11.53□□□□□ -0.56
ZEB1-215ENST00000559476 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
ZEB1-215ENST00000559476 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
ZEB1-215ENST00000559476 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
ZEB1-215ENST00000559476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.591e-7■■■■■ 28.4
ZEB1-215ENST00000559476 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
ZEB1-215ENST00000559476 SLAIN1Q8ND83 568 aa11.38□□□□□ -0.59
ZEB1-215ENST00000559476 POTEMA6NI47 508 aa11.36□□□□□ -0.59
ZEB1-215ENST00000559476 ILDR1Q86SU0 546 aaPredicted RBP11.36□□□□□ -0.59
ZEB1-215ENST00000559476 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
ZEB1-215ENST00000559476 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
ZEB1-215ENST00000559476 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
ZEB1-215ENST00000559476 FAM163AQ96GL9 167 aaPredicted RBP11.35□□□□□ -0.59
ZEB1-215ENST00000559476 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
ZEB1-215ENST00000559476 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
ZEB1-215ENST00000559476 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
ZEB1-215ENST00000559476 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
ZEB1-215ENST00000559476 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
ZEB1-215ENST00000559476 SNPHO15079 494 aa11.29□□□□□ -0.6
ZEB1-215ENST00000559476 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
ZEB1-215ENST00000559476 G3V3G9 751 aa11.27□□□□□ -0.61
ZEB1-215ENST00000559476 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
ZEB1-215ENST00000559476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
ZEB1-215ENST00000559476 SOX12O15370 315 aa11.23□□□□□ -0.61
ZEB1-215ENST00000559476 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
ZEB1-215ENST00000559476 ZFP91Q96JP5 570 aaPredicted RBP11.23□□□□□ -0.61
ZEB1-215ENST00000559476 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
ZEB1-215ENST00000559476 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
ZEB1-215ENST00000559476 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
ZEB1-215ENST00000559476 TMEM121BQ9BXQ6 578 aaPredicted RBP11.19□□□□□ -0.62
ZEB1-215ENST00000559476 ST18O60284 1047 aa11.18□□□□□ -0.62
ZEB1-215ENST00000559476 PKD2Q13563 968 aa11.12□□□□□ -0.63
ZEB1-215ENST00000559476 BCL11BQ9C0K0 894 aaPredicted RBP11.12□□□□□ -0.63
ZEB1-215ENST00000559476 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
ZEB1-215ENST00000559476 NLRP6P59044 892 aa11.1□□□□□ -0.63
ZEB1-215ENST00000559476 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
ZEB1-215ENST00000559476 STK25O00506 426 aa11.08□□□□□ -0.64
ZEB1-215ENST00000559476 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
ZEB1-215ENST00000559476 MICALL2Q8IY33 904 aa11.06□□□□□ -0.64
ZEB1-215ENST00000559476 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
ZEB1-215ENST00000559476 RGL2O15211 777 aa11.05□□□□□ -0.64
ZEB1-215ENST00000559476 CDAN1Q8IWY9 1227 aa11.05□□□□□ -0.64
ZEB1-215ENST00000559476 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
ZEB1-215ENST00000559476 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
ZEB1-215ENST00000559476 MFRPQ9BY79 579 aa10.99□□□□□ -0.65
ZEB1-215ENST00000559476 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
ZEB1-215ENST00000559476 EMP3P54852 163 aa10.98□□□□□ -0.65
ZEB1-215ENST00000559476 ZNF710Q8N1W2 664 aa10.98□□□□□ -0.65
ZEB1-215ENST00000559476 HOXB3P14651 431 aaPredicted RBP10.97□□□□□ -0.65
ZEB1-215ENST00000559476 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
ZEB1-215ENST00000559476 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms