RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 RNF25Q96BH1 459 aaPredicted RBP25.95■■□□□ 1.74
CASC4-208ENST00000559151 VSIG10Q8N0Z9 540 aa25.94■■□□□ 1.74
CASC4-208ENST00000559151 FAM212AQ96EL1 285 aa25.88■■□□□ 1.73
CASC4-208ENST00000559151 SPRYD3Q8NCJ5 442 aa25.87■■□□□ 1.73
CASC4-208ENST00000559151 RASEFQ8IZ41 740 aa25.82■■□□□ 1.72
CASC4-208ENST00000559151 HS6ST3Q8IZP7 471 aa25.82■■□□□ 1.72
CASC4-208ENST00000559151 RIOK3O14730 519 aaKnown RBP25.74■■□□□ 1.71
CASC4-208ENST00000559151 KDM2AQ9Y2K7 1162 aa25.74■■□□□ 1.71
CASC4-208ENST00000559151 TSHZ2Q9NRE2 1034 aa25.67■■□□□ 1.7
CASC4-208ENST00000559151 TAOK2Q9UL54 1235 aa25.63■■□□□ 1.69
CASC4-208ENST00000559151 CHRM1P11229 460 aaPredicted RBP25.62■■□□□ 1.69
CASC4-208ENST00000559151 DNAJC5Q9H3Z4 198 aa25.6■■□□□ 1.69
CASC4-208ENST00000559151 CHADLQ6NUI6 762 aa25.59■■□□□ 1.69
CASC4-208ENST00000559151 BCANQ96GW7 911 aa25.58■■□□□ 1.69
CASC4-208ENST00000559151 VGFO15240 615 aaPredicted RBP25.55■■□□□ 1.68
CASC4-208ENST00000559151 PYGBP11216 843 aa25.55■■□□□ 1.68
CASC4-208ENST00000559151 STK25O00506 426 aa25.5■■□□□ 1.67
CASC4-208ENST00000559151 NKX1-1Q15270 411 aaPredicted RBP25.5■■□□□ 1.67
CASC4-208ENST00000559151 FARP1Q9Y4F1 1045 aaPredicted RBP25.4■■□□□ 1.66
CASC4-208ENST00000559151 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.39■■□□□ 1.66
CASC4-208ENST00000559151 ZFP91Q96JP5 570 aaPredicted RBP25.39■■□□□ 1.66
CASC4-208ENST00000559151 SGIP1Q9BQI5 828 aa25.38■■□□□ 1.65
CASC4-208ENST00000559151 TSPYL2Q9H2G4 693 aaPredicted RBP25.37■■□□□ 1.65
CASC4-208ENST00000559151 BCL11BQ9C0K0 894 aaPredicted RBP25.34■■□□□ 1.65
CASC4-208ENST00000559151 GTPBP6O43824 516 aaPredicted RBP25.33■■□□□ 1.65
CASC4-208ENST00000559151 STK24Q9Y6E0 443 aa25.33■■□□□ 1.65
CASC4-208ENST00000559151 PRKAR2AP13861 404 aaKnown RBP25.3■■□□□ 1.64
CASC4-208ENST00000559151 FXR2P51116 673 aaKnown RBP eCLIP25.21■■□□□ 1.63
CASC4-208ENST00000559151 ZNF467Q7Z7K2 595 aaPredicted RBP25.15■■□□□ 1.62
CASC4-208ENST00000559151 CCDC61Q9Y6R9 512 aa25.11■■□□□ 1.61
CASC4-208ENST00000559151 PCDHB8Q9UN66 801 aa25.07■■□□□ 1.6
CASC4-208ENST00000559151 PCDHB13Q9Y5F0 798 aa25.07■■□□□ 1.6
CASC4-208ENST00000559151 PRKCSHP14314 528 aaPredicted RBP25.06■■□□□ 1.6
CASC4-208ENST00000559151 PDAP1Q13442 181 aaKnown RBP25.02■■□□□ 1.6
CASC4-208ENST00000559151 CHRDL2Q6WN34 429 aa25.02■■□□□ 1.6
CASC4-208ENST00000559151 RYDENQ9NUL5 291 aaKnown RBP25.02■■□□□ 1.6
CASC4-208ENST00000559151 PIP4P2Q8N4L2 257 aa24.99■■□□□ 1.59
CASC4-208ENST00000559151 ZNF579Q8NAF0 562 aaKnown RBP24.94■■□□□ 1.58
CASC4-208ENST00000559151 PAK3O75914 559 aaPredicted RBP24.93■■□□□ 1.58
CASC4-208ENST00000559151 PSEN1P49768 467 aa24.9■■□□□ 1.58
CASC4-208ENST00000559151 TPRNQ4KMQ1 711 aa24.84■■□□□ 1.57
CASC4-208ENST00000559151 NBR1Q14596 966 aa24.83■■□□□ 1.57
CASC4-208ENST00000559151 IFNL1Q8IU54 200 aa24.82■■□□□ 1.56
CASC4-208ENST00000559151 MAP3K13O43283 966 aa24.8■■□□□ 1.56
CASC4-208ENST00000559151 KIF12Q96FN5 646 aa24.78■■□□□ 1.56
CASC4-208ENST00000559151 MFRPQ9BY79 579 aa24.72■■□□□ 1.55
CASC4-208ENST00000559151 ZRANB1Q9UGI0 708 aa24.68■■□□□ 1.54
CASC4-208ENST00000559151 CD44P16070 742 aaKnown RBP24.64■■□□□ 1.54
CASC4-208ENST00000559151 CADPS2Q86UW7 1296 aa24.64■■□□□ 1.54
CASC4-208ENST00000559151 CABP2Q9NPB3 220 aa24.61■■□□□ 1.53
CASC4-208ENST00000559151 EFCAB3Q8N7B9 438 aa24.6■■□□□ 1.53
CASC4-208ENST00000559151 PHF12Q96QT6 1004 aa24.59■■□□□ 1.53
CASC4-208ENST00000559151 FBXO22Q8NEZ5 403 aa24.5■■□□□ 1.51
CASC4-208ENST00000559151 PPP1R37O75864 691 aa24.49■■□□□ 1.51
CASC4-208ENST00000559151 PHF8Q9UPP1 1060 aa24.49■■□□□ 1.51
CASC4-208ENST00000559151 NLRP6P59044 892 aa24.48■■□□□ 1.51
CASC4-208ENST00000559151 SOX12O15370 315 aa24.47■■□□□ 1.51
CASC4-208ENST00000559151 WDR70Q9NW82 654 aa24.43■■□□□ 1.5
CASC4-208ENST00000559151 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
CASC4-208ENST00000559151 KCNV2Q8TDN2 545 aa24.35■■□□□ 1.49
CASC4-208ENST00000559151 MS4A3Q96HJ5 214 aa24.32■■□□□ 1.48
CASC4-208ENST00000559151 C19orf67A6NJJ6 358 aa24.31■■□□□ 1.48
CASC4-208ENST00000559151 TMEM106CQ9BVX2 250 aa24.31■■□□□ 1.48
CASC4-208ENST00000559151 TRPC6Q9Y210 931 aa24.31■■□□□ 1.48
CASC4-208ENST00000559151 MS4A4AQ96JQ5 239 aa24.25■■□□□ 1.47
CASC4-208ENST00000559151 GOLGA2Q08379 1002 aa24.23■■□□□ 1.47
CASC4-208ENST00000559151 MKRN3Q13064 507 aaKnown RBP24.11■■□□□ 1.45
CASC4-208ENST00000559151 NCKAP5LQ9HCH0 1330 aa24.09■■□□□ 1.45
CASC4-208ENST00000559151 TIE1P35590 1138 aa24.06■■□□□ 1.44
CASC4-208ENST00000559151 E2F4Q16254 413 aa24.06■■□□□ 1.44
CASC4-208ENST00000559151 TTLL13PA6NNM8 815 aa24.04■■□□□ 1.44
CASC4-208ENST00000559151 ARHGEF1Q92888 912 aaKnown RBP24■■□□□ 1.43
CASC4-208ENST00000559151 LARP6Q9BRS8 491 aaKnown RBP24■■□□□ 1.43
CASC4-208ENST00000559151 BMP2KQ9NSY1 1161 aaPredicted RBP23.99■■□□□ 1.43
CASC4-208ENST00000559151 PDE4AP27815 886 aa23.97■■□□□ 1.43
CASC4-208ENST00000559151 GALR2O43603 387 aaPredicted RBP23.95■■□□□ 1.42
CASC4-208ENST00000559151 CRISPLD2Q9H0B8 497 aa23.95■■□□□ 1.42
CASC4-208ENST00000559151 MFSD10Q14728 455 aa23.92■■□□□ 1.42
CASC4-208ENST00000559151 LMOD2Q6P5Q4 547 aa23.92■■□□□ 1.42
CASC4-208ENST00000559151 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.91■■□□□ 1.42
CASC4-208ENST00000559151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.9■■□□□ 1.42
CASC4-208ENST00000559151 ILDR1Q86SU0 546 aaPredicted RBP23.89■■□□□ 1.41
CASC4-208ENST00000559151 TRIM35Q9UPQ4 493 aa23.88■■□□□ 1.41
CASC4-208ENST00000559151 DDX27Q96GQ7 796 aaKnown RBP23.86■■□□□ 1.41
CASC4-208ENST00000559151 HAX1O00165 279 aa23.84■■□□□ 1.41
CASC4-208ENST00000559151 EVX2Q03828 476 aa23.81■■□□□ 1.4
CASC4-208ENST00000559151 SEMA3EO15041 775 aa23.8■■□□□ 1.4
CASC4-208ENST00000559151 TULP1O00294 542 aaPredicted RBP23.77■■□□□ 1.4
CASC4-208ENST00000559151 DPY19L2Q6NUT2 758 aa23.75■■□□□ 1.39
CASC4-208ENST00000559151 TESPA1A2RU30 521 aaPredicted RBP23.74■■□□□ 1.39
CASC4-208ENST00000559151 CAMK2BQ13554 666 aa23.71■■□□□ 1.39
CASC4-208ENST00000559151 ATN1P54259 1190 aaPredicted RBP23.69■■□□□ 1.38
CASC4-208ENST00000559151 CLCN6P51797 869 aa23.68■■□□□ 1.38
CASC4-208ENST00000559151 ARIH1Q9Y4X5 557 aaPredicted RBP23.67■■□□□ 1.38
CASC4-208ENST00000559151 GPHNQ9NQX3 736 aaPredicted RBP23.65■■□□□ 1.38
CASC4-208ENST00000559151 PPP1R15BQ5SWA1 713 aa23.64■■□□□ 1.37
CASC4-208ENST00000559151 PDCD7Q8N8D1 485 aaKnown RBP23.64■■□□□ 1.37
CASC4-208ENST00000559151 MICALL2Q8IY33 904 aa23.62■■□□□ 1.37
CASC4-208ENST00000559151 ATMINO43313 823 aaPredicted RBP23.6■■□□□ 1.37
CASC4-208ENST00000559151 ZC3H15Q8WU90 426 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms