RNA–Protein interactions for RNA: ENST00000558734.1

SLTM-216, Transcript of SAFB like transcription modulator, humanhuman

TSL 5

Gene SLTM, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-216ENST00000558734 SLC39A7Q92504 469 aa10.78□□□□□ -0.68
SLTM-216ENST00000558734 ASTLQ6HA08 431 aaPredicted RBP10.71□□□□□ -0.69
SLTM-216ENST00000558734 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
SLTM-216ENST00000558734 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
SLTM-216ENST00000558734 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
SLTM-216ENST00000558734 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
SLTM-216ENST00000558734 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
SLTM-216ENST00000558734 CREBZFQ9NS37 354 aa10.6□□□□□ -0.71
SLTM-216ENST00000558734 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
SLTM-216ENST00000558734 ST18O60284 1047 aa10.47□□□□□ -0.73
SLTM-216ENST00000558734 ATN1P54259 1190 aaPredicted RBP10.47□□□□□ -0.73
SLTM-216ENST00000558734 POTEFA5A3E0 1075 aa10.46□□□□□ -0.73
SLTM-216ENST00000558734 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
SLTM-216ENST00000558734 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
SLTM-216ENST00000558734 SLAIN1Q8ND83 568 aa10.33□□□□□ -0.76
SLTM-216ENST00000558734 SEC24BO95487 1268 aa10.32□□□□□ -0.76
SLTM-216ENST00000558734 TMEM121BQ9BXQ6 578 aaPredicted RBP10.31□□□□□ -0.76
SLTM-216ENST00000558734 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
SLTM-216ENST00000558734 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
SLTM-216ENST00000558734 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
SLTM-216ENST00000558734 SPDYE4A6NLX3 237 aa10.23□□□□□ -0.77
SLTM-216ENST00000558734 TIE1P35590 1138 aa10.22□□□□□ -0.77
SLTM-216ENST00000558734 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
SLTM-216ENST00000558734 TRPC6Q9Y210 931 aa10.18□□□□□ -0.78
SLTM-216ENST00000558734 KIF12Q96FN5 646 aa10.17□□□□□ -0.78
SLTM-216ENST00000558734 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
SLTM-216ENST00000558734 SNPHO15079 494 aa10.16□□□□□ -0.78
SLTM-216ENST00000558734 CCDC61Q9Y6R9 512 aa10.16□□□□□ -0.78
SLTM-216ENST00000558734 IER5LQ5T953 404 aa10.15□□□□□ -0.78
SLTM-216ENST00000558734 PROM2Q8N271 834 aa10.14□□□□□ -0.79
SLTM-216ENST00000558734 TTLL13PA6NNM8 815 aa10.11□□□□□ -0.79
SLTM-216ENST00000558734 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
SLTM-216ENST00000558734 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
SLTM-216ENST00000558734 TRIM35Q9UPQ4 493 aa10.06□□□□□ -0.8
SLTM-216ENST00000558734 MAP3K13O43283 966 aa10.05□□□□□ -0.8
SLTM-216ENST00000558734 EMP3P54852 163 aa10.04□□□□□ -0.8
SLTM-216ENST00000558734 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
SLTM-216ENST00000558734 PLCG2P16885 1265 aa9.99□□□□□ -0.81
SLTM-216ENST00000558734 FKBP8Q14318 412 aa9.98□□□□□ -0.81
SLTM-216ENST00000558734 POTEB3A0JP26 581 aa9.96□□□□□ -0.82
SLTM-216ENST00000558734 POTEBQ6S5H4 581 aa9.96□□□□□ -0.82
SLTM-216ENST00000558734 FAM205CA6NFA0 338 aa9.95□□□□□ -0.82
SLTM-216ENST00000558734 RNF166Q96A37 237 aaPredicted RBP9.95□□□□□ -0.82
SLTM-216ENST00000558734 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.94□□□□□ -0.82
SLTM-216ENST00000558734 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
SLTM-216ENST00000558734 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
SLTM-216ENST00000558734 OCEL1Q9H607 264 aa9.82□□□□□ -0.84
SLTM-216ENST00000558734 PCDHB13Q9Y5F0 798 aa9.82□□□□□ -0.84
SLTM-216ENST00000558734 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
SLTM-216ENST00000558734 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
SLTM-216ENST00000558734 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
SLTM-216ENST00000558734 IFNL1Q8IU54 200 aa9.72□□□□□ -0.85
SLTM-216ENST00000558734 C3orf67Q6ZVT6 689 aa9.71□□□□□ -0.86
SLTM-216ENST00000558734 MIER1Q8N108 512 aa9.7□□□□□ -0.86
SLTM-216ENST00000558734 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
SLTM-216ENST00000558734 ERBB3P21860 1342 aa9.62□□□□□ -0.87
SLTM-216ENST00000558734 PTGER2P43116 358 aa9.62□□□□□ -0.87
SLTM-216ENST00000558734 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
SLTM-216ENST00000558734 L3MBTL3Q96JM7 780 aaPredicted RBP9.61□□□□□ -0.87
SLTM-216ENST00000558734 NUBP1P53384 320 aa9.6□□□□□ -0.87
SLTM-216ENST00000558734 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
SLTM-216ENST00000558734 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
SLTM-216ENST00000558734 VASPP50552 380 aaPredicted RBP9.58□□□□□ -0.88
SLTM-216ENST00000558734 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
SLTM-216ENST00000558734 PDCD7Q8N8D1 485 aaKnown RBP9.54□□□□□ -0.88
SLTM-216ENST00000558734 HOXB3P14651 431 aaPredicted RBP9.53□□□□□ -0.88
SLTM-216ENST00000558734 ZNF710Q8N1W2 664 aa9.53□□□□□ -0.88
SLTM-216ENST00000558734 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
SLTM-216ENST00000558734 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
SLTM-216ENST00000558734 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
SLTM-216ENST00000558734 DOK7Q18PE1 504 aa9.45□□□□□ -0.9
SLTM-216ENST00000558734 ZBTB47Q9UFB7 747 aaPredicted RBP9.45□□□□□ -0.9
SLTM-216ENST00000558734 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
SLTM-216ENST00000558734 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
SLTM-216ENST00000558734 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
SLTM-216ENST00000558734 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
SLTM-216ENST00000558734 GOLGA2Q08379 1002 aa9.38□□□□□ -0.91
SLTM-216ENST00000558734 KLHL34Q8N239 644 aa9.38□□□□□ -0.91
SLTM-216ENST00000558734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.37□□□□□ -0.912e-6■■■■■ 36
SLTM-216ENST00000558734 HCSTQ9UBK5 93 aa9.36□□□□□ -0.91
SLTM-216ENST00000558734 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
SLTM-216ENST00000558734 PYGBP11216 843 aa9.33□□□□□ -0.92
SLTM-216ENST00000558734 IRX2Q9BZI1 471 aaPredicted RBP9.33□□□□□ -0.92
SLTM-216ENST00000558734 PCDHB8Q9UN66 801 aa9.33□□□□□ -0.92
SLTM-216ENST00000558734 SPOCK2Q92563 424 aa9.32□□□□□ -0.92
SLTM-216ENST00000558734 G3V3G9 751 aa9.31□□□□□ -0.92
SLTM-216ENST00000558734 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
SLTM-216ENST00000558734 ZSWIM6Q9HCJ5 1215 aa9.28□□□□□ -0.92
SLTM-216ENST00000558734 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
SLTM-216ENST00000558734 RGS20O76081 388 aa9.25□□□□□ -0.93
SLTM-216ENST00000558734 CHRM1P11229 460 aaPredicted RBP9.25□□□□□ -0.93
SLTM-216ENST00000558734 GSE1Q14687 1217 aa9.25□□□□□ -0.93
SLTM-216ENST00000558734 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
SLTM-216ENST00000558734 ILDR1Q86SU0 546 aaPredicted RBP9.24□□□□□ -0.93
SLTM-216ENST00000558734 GPR153Q6NV75 609 aa9.21□□□□□ -0.94
SLTM-216ENST00000558734 CIZ1Q9ULV3 898 aaPredicted RBP9.2□□□□□ -0.94
SLTM-216ENST00000558734 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
SLTM-216ENST00000558734 RNF25Q96BH1 459 aaPredicted RBP9.15□□□□□ -0.94
SLTM-216ENST00000558734 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
SLTM-216ENST00000558734 PBX2P40425 430 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms