RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
PDE8A-209ENST00000558543 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
PDE8A-209ENST00000558543 MS4A3Q96HJ5 214 aa12.9□□□□□ -0.34
PDE8A-209ENST00000558543 NUBP1P53384 320 aa12.89□□□□□ -0.35
PDE8A-209ENST00000558543 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
PDE8A-209ENST00000558543 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
PDE8A-209ENST00000558543 MAP3K13O43283 966 aa12.8□□□□□ -0.36
PDE8A-209ENST00000558543 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
PDE8A-209ENST00000558543 LHX8Q68G74 356 aa12.77□□□□□ -0.37
PDE8A-209ENST00000558543 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
PDE8A-209ENST00000558543 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
PDE8A-209ENST00000558543 TRPC6Q9Y210 931 aa12.74□□□□□ -0.37
PDE8A-209ENST00000558543 PCDHB13Q9Y5F0 798 aa12.71□□□□□ -0.37
PDE8A-209ENST00000558543 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
PDE8A-209ENST00000558543 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
PDE8A-209ENST00000558543 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
PDE8A-209ENST00000558543 PYGBP11216 843 aa12.68□□□□□ -0.38
PDE8A-209ENST00000558543 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
PDE8A-209ENST00000558543 ATN1P54259 1190 aaPredicted RBP12.65□□□□□ -0.38
PDE8A-209ENST00000558543 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
PDE8A-209ENST00000558543 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
PDE8A-209ENST00000558543 SPOCK2Q92563 424 aa12.61□□□□□ -0.39
PDE8A-209ENST00000558543 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
PDE8A-209ENST00000558543 TIE1P35590 1138 aa12.6□□□□□ -0.39
PDE8A-209ENST00000558543 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
PDE8A-209ENST00000558543 GSE1Q14687 1217 aa12.59□□□□□ -0.39
PDE8A-209ENST00000558543 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
PDE8A-209ENST00000558543 SLC39A7Q92504 469 aa12.58□□□□□ -0.4
PDE8A-209ENST00000558543 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
PDE8A-209ENST00000558543 C7P10643 843 aa12.55□□□□□ -0.4
PDE8A-209ENST00000558543 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
PDE8A-209ENST00000558543 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
PDE8A-209ENST00000558543 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
PDE8A-209ENST00000558543 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
PDE8A-209ENST00000558543 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
PDE8A-209ENST00000558543 SEC24BO95487 1268 aa12.44□□□□□ -0.42
PDE8A-209ENST00000558543 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
PDE8A-209ENST00000558543 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
PDE8A-209ENST00000558543 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
PDE8A-209ENST00000558543 ZNF467Q7Z7K2 595 aaPredicted RBP12.42□□□□□ -0.42
PDE8A-209ENST00000558543 IER5LQ5T953 404 aa12.38□□□□□ -0.43
PDE8A-209ENST00000558543 PSEN1P49768 467 aa12.35□□□□□ -0.43
PDE8A-209ENST00000558543 PLCG2P16885 1265 aa12.32□□□□□ -0.44
PDE8A-209ENST00000558543 MAMSTRQ6ZN01 415 aa12.31□□□□□ -0.44
PDE8A-209ENST00000558543 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
PDE8A-209ENST00000558543 PDAP1Q13442 181 aaKnown RBP12.3□□□□□ -0.44
PDE8A-209ENST00000558543 SCUBE2Q9NQ36 999 aa12.3□□□□□ -0.44
PDE8A-209ENST00000558543 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
PDE8A-209ENST00000558543 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
PDE8A-209ENST00000558543 OCEL1Q9H607 264 aa12.25□□□□□ -0.45
PDE8A-209ENST00000558543 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
PDE8A-209ENST00000558543 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
PDE8A-209ENST00000558543 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
PDE8A-209ENST00000558543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.462e-7■■□□□ 12.7
PDE8A-209ENST00000558543 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
PDE8A-209ENST00000558543 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
PDE8A-209ENST00000558543 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
PDE8A-209ENST00000558543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
PDE8A-209ENST00000558543 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
PDE8A-209ENST00000558543 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
PDE8A-209ENST00000558543 DPY19L2Q6NUT2 758 aa12.1□□□□□ -0.47
PDE8A-209ENST00000558543 EFCAB3Q8N7B9 438 aa12.1□□□□□ -0.47
PDE8A-209ENST00000558543 FAM163AQ96GL9 167 aaPredicted RBP12.1□□□□□ -0.47
PDE8A-209ENST00000558543 VGFO15240 615 aaPredicted RBP12.09□□□□□ -0.47
PDE8A-209ENST00000558543 PKD2Q13563 968 aa12.08□□□□□ -0.48
PDE8A-209ENST00000558543 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
PDE8A-209ENST00000558543 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
PDE8A-209ENST00000558543 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
PDE8A-209ENST00000558543 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
PDE8A-209ENST00000558543 POTEMA6NI47 508 aa12.03□□□□□ -0.48
PDE8A-209ENST00000558543 LCE2DQ5TA82 110 aaPredicted RBP12.03□□□□□ -0.48
PDE8A-209ENST00000558543 RGL2O15211 777 aa12.02□□□□□ -0.49
PDE8A-209ENST00000558543 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
PDE8A-209ENST00000558543 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
PDE8A-209ENST00000558543 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
PDE8A-209ENST00000558543 G3V3G9 751 aa11.97□□□□□ -0.49
PDE8A-209ENST00000558543 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
PDE8A-209ENST00000558543 STK25O00506 426 aa11.96□□□□□ -0.49
PDE8A-209ENST00000558543 TAOK2Q9UL54 1235 aa11.96□□□□□ -0.49
PDE8A-209ENST00000558543 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
PDE8A-209ENST00000558543 SOX12O15370 315 aa11.93□□□□□ -0.5
PDE8A-209ENST00000558543 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
PDE8A-209ENST00000558543 ST18O60284 1047 aa11.9□□□□□ -0.5
PDE8A-209ENST00000558543 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
PDE8A-209ENST00000558543 SNPHO15079 494 aa11.85□□□□□ -0.51
PDE8A-209ENST00000558543 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
PDE8A-209ENST00000558543 NLRP6P59044 892 aa11.84□□□□□ -0.51
PDE8A-209ENST00000558543 MFRPQ9BY79 579 aa11.84□□□□□ -0.51
PDE8A-209ENST00000558543 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
PDE8A-209ENST00000558543 PLSCR2Q9NRY7 297 aa11.81□□□□□ -0.52
PDE8A-209ENST00000558543 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
PDE8A-209ENST00000558543 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
PDE8A-209ENST00000558543 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
PDE8A-209ENST00000558543 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
PDE8A-209ENST00000558543 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.53
PDE8A-209ENST00000558543 HS6ST3Q8IZP7 471 aa11.71□□□□□ -0.53
PDE8A-209ENST00000558543 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
PDE8A-209ENST00000558543 EMP3P54852 163 aa11.69□□□□□ -0.54
PDE8A-209ENST00000558543 PPP1R37O75864 691 aa11.68□□□□□ -0.54
PDE8A-209ENST00000558543 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms