RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 RBM10P98175 930 aaKnown RBP13.58□□□□□ -0.24
TRPM1-207ENST00000558445 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
TRPM1-207ENST00000558445 ZNF326Q5BKZ1 582 aaKnown RBP13.57□□□□□ -0.24
TRPM1-207ENST00000558445 DDX10Q13206 875 aaKnown RBP13.56□□□□□ -0.24
TRPM1-207ENST00000558445 DDRGK1Q96HY6 314 aa13.55□□□□□ -0.24
TRPM1-207ENST00000558445 FGD1P98174 961 aa13.53□□□□□ -0.24
TRPM1-207ENST00000558445 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
TRPM1-207ENST00000558445 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
TRPM1-207ENST00000558445 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
TRPM1-207ENST00000558445 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
TRPM1-207ENST00000558445 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
TRPM1-207ENST00000558445 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
TRPM1-207ENST00000558445 AAMPQ13685 434 aa13.46□□□□□ -0.26
TRPM1-207ENST00000558445 L1TD1Q5T7N2 865 aaKnown RBP13.45□□□□□ -0.26
TRPM1-207ENST00000558445 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
TRPM1-207ENST00000558445 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
TRPM1-207ENST00000558445 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
TRPM1-207ENST00000558445 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
TRPM1-207ENST00000558445 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
TRPM1-207ENST00000558445 CDK11BP21127 795 aaKnown RBP13.37□□□□□ -0.27
TRPM1-207ENST00000558445 FRAT1Q92837 279 aaPredicted RBP13.36□□□□□ -0.27
TRPM1-207ENST00000558445 EEA1Q15075 1411 aa13.35□□□□□ -0.27
TRPM1-207ENST00000558445 ARID4BQ4LE39 1312 aaPredicted RBP13.34□□□□□ -0.27
TRPM1-207ENST00000558445 TRIM44Q96DX7 344 aaPredicted RBP13.33□□□□□ -0.28
TRPM1-207ENST00000558445 ARXQ96QS3 562 aa13.31□□□□□ -0.28
TRPM1-207ENST00000558445 BBXQ8WY36 941 aaPredicted RBP13.31□□□□□ -0.28
TRPM1-207ENST00000558445 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
TRPM1-207ENST00000558445 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.28
TRPM1-207ENST00000558445 TPM2P07951 284 aa13.27□□□□□ -0.28
TRPM1-207ENST00000558445 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.28
TRPM1-207ENST00000558445 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.28
TRPM1-207ENST00000558445 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
TRPM1-207ENST00000558445 MAP7D2Q96T17 732 aa13.25□□□□□ -0.29
TRPM1-207ENST00000558445 ANP32BQ92688 251 aaKnown RBP13.25□□□□□ -0.29
TRPM1-207ENST00000558445 NAP1L2Q9ULW6 460 aaPredicted RBP13.25□□□□□ -0.29
TRPM1-207ENST00000558445 CEP162Q5TB80 1403 aa13.23□□□□□ -0.29
TRPM1-207ENST00000558445 RGS3P49796 1198 aa13.21□□□□□ -0.29
TRPM1-207ENST00000558445 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
TRPM1-207ENST00000558445 PAXIP1Q6ZW49 1069 aaPredicted RBP13.19□□□□□ -0.3
TRPM1-207ENST00000558445 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
TRPM1-207ENST00000558445 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
TRPM1-207ENST00000558445 PDE4AP27815 886 aa13.17□□□□□ -0.3
TRPM1-207ENST00000558445 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
TRPM1-207ENST00000558445 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
TRPM1-207ENST00000558445 CLCN1P35523 988 aa13.14□□□□□ -0.31
TRPM1-207ENST00000558445 BECN1Q14457 450 aa13.14□□□□□ -0.31
TRPM1-207ENST00000558445 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
TRPM1-207ENST00000558445 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
TRPM1-207ENST00000558445 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
TRPM1-207ENST00000558445 MS4A1P11836 297 aa13.12□□□□□ -0.31
TRPM1-207ENST00000558445 MRS2Q9HD23 443 aa13.12□□□□□ -0.31
TRPM1-207ENST00000558445 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
TRPM1-207ENST00000558445 DHX57Q6P158 1386 aaKnown RBP13.11□□□□□ -0.31
TRPM1-207ENST00000558445 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
TRPM1-207ENST00000558445 RRAGDQ9NQL2 400 aaPredicted RBP13.1□□□□□ -0.31
TRPM1-207ENST00000558445 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
TRPM1-207ENST00000558445 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
TRPM1-207ENST00000558445 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.31
TRPM1-207ENST00000558445 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
TRPM1-207ENST00000558445 TNIKQ9UKE5 1360 aa13.08□□□□□ -0.32
TRPM1-207ENST00000558445 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
TRPM1-207ENST00000558445 ARID3AQ99856 593 aa13.07□□□□□ -0.32
TRPM1-207ENST00000558445 FRAT2O75474 233 aaPredicted RBP13.07□□□□□ -0.32
TRPM1-207ENST00000558445 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
TRPM1-207ENST00000558445 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
TRPM1-207ENST00000558445 SIN3AQ96ST3 1273 aa13.05□□□□□ -0.32
TRPM1-207ENST00000558445 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
TRPM1-207ENST00000558445 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
TRPM1-207ENST00000558445 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
TRPM1-207ENST00000558445 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
TRPM1-207ENST00000558445 ESPNB1AK53 854 aa13.02□□□□□ -0.32
TRPM1-207ENST00000558445 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.33
TRPM1-207ENST00000558445 TAF3Q5VWG9 929 aa13.02□□□□□ -0.33
TRPM1-207ENST00000558445 BACH2Q9BYV9 841 aa13.02□□□□□ -0.33
TRPM1-207ENST00000558445 PTMSP20962 102 aa13.01□□□□□ -0.33
TRPM1-207ENST00000558445 KIAA1211Q6ZU35 1233 aa13□□□□□ -0.33
TRPM1-207ENST00000558445 DCAF11Q8TEB1 546 aa13□□□□□ -0.33
TRPM1-207ENST00000558445 UPF2Q9HAU5 1272 aaKnown RBP13□□□□□ -0.33
TRPM1-207ENST00000558445 NUDCQ9Y266 331 aa12.98□□□□□ -0.33
TRPM1-207ENST00000558445 TONSLQ96HA7 1378 aa12.98□□□□□ -0.33
TRPM1-207ENST00000558445 MRE11P49959 708 aa12.98□□□□□ -0.33
TRPM1-207ENST00000558445 AEBP2Q6ZN18 517 aaPredicted RBP12.97□□□□□ -0.33
TRPM1-207ENST00000558445 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
TRPM1-207ENST00000558445 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
TRPM1-207ENST00000558445 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
TRPM1-207ENST00000558445 APPP05067 770 aa12.95□□□□□ -0.34
TRPM1-207ENST00000558445 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
TRPM1-207ENST00000558445 POGKQ9P215 609 aa12.93□□□□□ -0.34
TRPM1-207ENST00000558445 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
TRPM1-207ENST00000558445 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
TRPM1-207ENST00000558445 PRDM4Q9UKN5 801 aa12.91□□□□□ -0.34
TRPM1-207ENST00000558445 IRX3P78415 501 aaPredicted RBP12.91□□□□□ -0.34
TRPM1-207ENST00000558445 STAC3Q96MF2 364 aa12.9□□□□□ -0.34
TRPM1-207ENST00000558445 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
TRPM1-207ENST00000558445 POLR3GLQ9BT43 218 aa12.9□□□□□ -0.34
TRPM1-207ENST00000558445 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
TRPM1-207ENST00000558445 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
TRPM1-207ENST00000558445 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
TRPM1-207ENST00000558445 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
TRPM1-207ENST00000558445 KIF20AO95235 890 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms