RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 MAMSTRQ6ZN01 415 aa14.53□□□□□ -0.08
FOXN3-217ENST00000557572 FAM163AQ96GL9 167 aaPredicted RBP14.53□□□□□ -0.08
FOXN3-217ENST00000557572 MS4A3Q96HJ5 214 aa14.52□□□□□ -0.09
FOXN3-217ENST00000557572 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
FOXN3-217ENST00000557572 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
FOXN3-217ENST00000557572 LCE2DQ5TA82 110 aaPredicted RBP14.44□□□□□ -0.1
FOXN3-217ENST00000557572 SCUBE2Q9NQ36 999 aa14.44□□□□□ -0.1
FOXN3-217ENST00000557572 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
FOXN3-217ENST00000557572 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
FOXN3-217ENST00000557572 TSPYL2Q9H2G4 693 aaPredicted RBP14.35□□□□□ -0.11
FOXN3-217ENST00000557572 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
FOXN3-217ENST00000557572 CDAN1Q8IWY9 1227 aa14.21□□□□□ -0.13
FOXN3-217ENST00000557572 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
FOXN3-217ENST00000557572 CCDC61Q9Y6R9 512 aa14.21□□□□□ -0.13
FOXN3-217ENST00000557572 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
FOXN3-217ENST00000557572 KIF12Q96FN5 646 aa14.19□□□□□ -0.14
FOXN3-217ENST00000557572 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
FOXN3-217ENST00000557572 SEC24BO95487 1268 aa14.14□□□□□ -0.15
FOXN3-217ENST00000557572 TIE1P35590 1138 aa14.11□□□□□ -0.15
FOXN3-217ENST00000557572 MAP3K13O43283 966 aa14.1□□□□□ -0.15
FOXN3-217ENST00000557572 COLQQ9Y215 455 aaPredicted RBP14.1□□□□□ -0.15
FOXN3-217ENST00000557572 TTLL13PA6NNM8 815 aa14.03□□□□□ -0.16
FOXN3-217ENST00000557572 SLAIN1Q8ND83 568 aa14□□□□□ -0.17
FOXN3-217ENST00000557572 ST18O60284 1047 aa13.99□□□□□ -0.17
FOXN3-217ENST00000557572 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
FOXN3-217ENST00000557572 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
FOXN3-217ENST00000557572 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
FOXN3-217ENST00000557572 IER5LQ5T953 404 aa13.93□□□□□ -0.18
FOXN3-217ENST00000557572 MMRN1Q13201 1228 aa13.91□□□□□ -0.18
FOXN3-217ENST00000557572 MIER1Q8N108 512 aa13.91□□□□□ -0.18
FOXN3-217ENST00000557572 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
FOXN3-217ENST00000557572 SPNS2Q8IVW8 549 aa13.86□□□□□ -0.19
FOXN3-217ENST00000557572 PROM2Q8N271 834 aa13.85□□□□□ -0.19
FOXN3-217ENST00000557572 SGIP1Q9BQI5 828 aa13.82□□□□□ -0.2
FOXN3-217ENST00000557572 PLCG2P16885 1265 aa13.81□□□□□ -0.2
FOXN3-217ENST00000557572 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
FOXN3-217ENST00000557572 TMEM121BQ9BXQ6 578 aaPredicted RBP13.76□□□□□ -0.21
FOXN3-217ENST00000557572 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
FOXN3-217ENST00000557572 MARVELD3Q96A59 401 aa13.73□□□□□ -0.21
FOXN3-217ENST00000557572 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
FOXN3-217ENST00000557572 SNPHO15079 494 aa13.7□□□□□ -0.22
FOXN3-217ENST00000557572 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
FOXN3-217ENST00000557572 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
FOXN3-217ENST00000557572 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
FOXN3-217ENST00000557572 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.65□□□□□ -0.22
FOXN3-217ENST00000557572 NUBP1P53384 320 aa13.62□□□□□ -0.23
FOXN3-217ENST00000557572 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-217ENST00000557572 FAM212AQ96EL1 285 aa13.58□□□□□ -0.24
FOXN3-217ENST00000557572 EMP3P54852 163 aa13.55□□□□□ -0.24
FOXN3-217ENST00000557572 FAM205CA6NFA0 338 aa13.47□□□□□ -0.25
FOXN3-217ENST00000557572 HS3ST6Q96QI5 342 aa13.47□□□□□ -0.25
FOXN3-217ENST00000557572 C3orf67Q6ZVT6 689 aa13.46□□□□□ -0.25
FOXN3-217ENST00000557572 KRTAP3-3Q9BYR6 98 aa13.46□□□□□ -0.25
FOXN3-217ENST00000557572 KRTAP3-2Q9BYR7 98 aa13.46□□□□□ -0.25
FOXN3-217ENST00000557572 PYGBP11216 843 aa13.45□□□□□ -0.26
FOXN3-217ENST00000557572 POTEB3A0JP26 581 aa13.44□□□□□ -0.26
FOXN3-217ENST00000557572 POTEBQ6S5H4 581 aa13.44□□□□□ -0.26
FOXN3-217ENST00000557572 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
FOXN3-217ENST00000557572 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
FOXN3-217ENST00000557572 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
FOXN3-217ENST00000557572 PDCD7Q8N8D1 485 aaKnown RBP13.36□□□□□ -0.27
FOXN3-217ENST00000557572 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
FOXN3-217ENST00000557572 MKRN3Q13064 507 aaKnown RBP13.33□□□□□ -0.28
FOXN3-217ENST00000557572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
FOXN3-217ENST00000557572 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
FOXN3-217ENST00000557572 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-217ENST00000557572 ERBB3P21860 1342 aa13.16□□□□□ -0.3
FOXN3-217ENST00000557572 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
FOXN3-217ENST00000557572 G3V3G9 751 aa13.14□□□□□ -0.31
FOXN3-217ENST00000557572 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
FOXN3-217ENST00000557572 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
FOXN3-217ENST00000557572 HOXB1P14653 301 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-217ENST00000557572 PSEN1P49768 467 aa13.12□□□□□ -0.31
FOXN3-217ENST00000557572 MYT1LQ9UL68 1186 aa13.09□□□□□ -0.31
FOXN3-217ENST00000557572 GSE1Q14687 1217 aa13.07□□□□□ -0.32
FOXN3-217ENST00000557572 BOLA1Q9Y3E2 137 aa13.07□□□□□ -0.32
FOXN3-217ENST00000557572 DOK7Q18PE1 504 aa13.06□□□□□ -0.32
FOXN3-217ENST00000557572 VARS2Q5ST30 1063 aaKnown RBP13.04□□□□□ -0.32
FOXN3-217ENST00000557572 ILDR1Q86SU0 546 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-217ENST00000557572 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
FOXN3-217ENST00000557572 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
FOXN3-217ENST00000557572 CHRM1P11229 460 aaPredicted RBP12.99□□□□□ -0.33
FOXN3-217ENST00000557572 FKBP8Q14318 412 aa12.99□□□□□ -0.33
FOXN3-217ENST00000557572 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
FOXN3-217ENST00000557572 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
FOXN3-217ENST00000557572 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
FOXN3-217ENST00000557572 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
FOXN3-217ENST00000557572 PTGER2P43116 358 aa12.88□□□□□ -0.35
FOXN3-217ENST00000557572 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
FOXN3-217ENST00000557572 ZSWIM6Q9HCJ5 1215 aa12.84□□□□□ -0.35
FOXN3-217ENST00000557572 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
FOXN3-217ENST00000557572 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
FOXN3-217ENST00000557572 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
FOXN3-217ENST00000557572 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
FOXN3-217ENST00000557572 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
FOXN3-217ENST00000557572 MICALL2Q8IY33 904 aa12.73□□□□□ -0.37
FOXN3-217ENST00000557572 ARSIQ5FYB1 569 aa12.72□□□□□ -0.37
FOXN3-217ENST00000557572 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
FOXN3-217ENST00000557572 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
FOXN3-217ENST00000557572 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms