RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 TSPYL2Q9H2G4 693 aaPredicted RBP10.74□□□□□ -0.69
MTHFD1-216ENST00000557539 PLEKHG5O94827 1062 aa10.73□□□□□ -0.69
MTHFD1-216ENST00000557539 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
MTHFD1-216ENST00000557539 TRIM41Q8WV44 630 aa10.72□□□□□ -0.69
MTHFD1-216ENST00000557539 PLCB2Q00722 1185 aa10.71□□□□□ -0.69
MTHFD1-216ENST00000557539 CCDC61Q9Y6R9 512 aa10.71□□□□□ -0.69
MTHFD1-216ENST00000557539 DCBLD2Q96PD2 775 aa10.68□□□□□ -0.7
MTHFD1-216ENST00000557539 NUBP1P53384 320 aa10.67□□□□□ -0.7
MTHFD1-216ENST00000557539 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
MTHFD1-216ENST00000557539 KIF12Q96FN5 646 aa10.63□□□□□ -0.71
MTHFD1-216ENST00000557539 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-216ENST00000557539 DCAF8L2P0C7V8 631 aa10.61□□□□□ -0.71
MTHFD1-216ENST00000557539 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-216ENST00000557539 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-216ENST00000557539 LHX8Q68G74 356 aa10.61□□□□□ -0.71
MTHFD1-216ENST00000557539 PELP1Q8IZL8 1130 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-216ENST00000557539 MAP3K13O43283 966 aa10.57□□□□□ -0.72
MTHFD1-216ENST00000557539 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
MTHFD1-216ENST00000557539 ASTLQ6HA08 431 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-216ENST00000557539 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-216ENST00000557539 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
MTHFD1-216ENST00000557539 FAM212AQ96EL1 285 aa10.51□□□□□ -0.73
MTHFD1-216ENST00000557539 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
MTHFD1-216ENST00000557539 ATN1P54259 1190 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-216ENST00000557539 BMP2KQ9NSY1 1161 aaPredicted RBP10.48□□□□□ -0.73
MTHFD1-216ENST00000557539 KLHL34Q8N239 644 aa10.47□□□□□ -0.73
MTHFD1-216ENST00000557539 BCANQ96GW7 911 aa10.47□□□□□ -0.73
MTHFD1-216ENST00000557539 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.73
MTHFD1-216ENST00000557539 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
MTHFD1-216ENST00000557539 SGIP1Q9BQI5 828 aa10.45□□□□□ -0.74
MTHFD1-216ENST00000557539 PKD2Q13563 968 aa10.44□□□□□ -0.74
MTHFD1-216ENST00000557539 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
MTHFD1-216ENST00000557539 TIE1P35590 1138 aa10.43□□□□□ -0.74
MTHFD1-216ENST00000557539 PYGBP11216 843 aa10.42□□□□□ -0.74
MTHFD1-216ENST00000557539 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
MTHFD1-216ENST00000557539 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
MTHFD1-216ENST00000557539 TTLL13PA6NNM8 815 aa10.41□□□□□ -0.74
MTHFD1-216ENST00000557539 PRKCSHP14314 528 aaPredicted RBP10.41□□□□□ -0.74
MTHFD1-216ENST00000557539 VSIG10Q8N0Z9 540 aa10.41□□□□□ -0.74
MTHFD1-216ENST00000557539 SLC39A7Q92504 469 aa10.41□□□□□ -0.74
MTHFD1-216ENST00000557539 C7P10643 843 aa10.39□□□□□ -0.75
MTHFD1-216ENST00000557539 POTEFA5A3E0 1075 aa10.37□□□□□ -0.75
MTHFD1-216ENST00000557539 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
MTHFD1-216ENST00000557539 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
MTHFD1-216ENST00000557539 GSE1Q14687 1217 aa10.35□□□□□ -0.75
MTHFD1-216ENST00000557539 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
MTHFD1-216ENST00000557539 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
MTHFD1-216ENST00000557539 PCDHB8Q9UN66 801 aa10.34□□□□□ -0.75
MTHFD1-216ENST00000557539 TRIM35Q9UPQ4 493 aa10.33□□□□□ -0.76
MTHFD1-216ENST00000557539 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
MTHFD1-216ENST00000557539 TMEM106CQ9BVX2 250 aa10.31□□□□□ -0.76
MTHFD1-216ENST00000557539 COLQQ9Y215 455 aaPredicted RBP10.3□□□□□ -0.76
MTHFD1-216ENST00000557539 CHRM1P11229 460 aaPredicted RBP10.29□□□□□ -0.76
MTHFD1-216ENST00000557539 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
MTHFD1-216ENST00000557539 ECM2O94769 699 aaPredicted RBP10.28□□□□□ -0.76
MTHFD1-216ENST00000557539 PAXIP1Q6ZW49 1069 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-216ENST00000557539 CFAP44Q96MT7 982 aa10.25□□□□□ -0.77
MTHFD1-216ENST00000557539 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-216ENST00000557539 KDM2AQ9Y2K7 1162 aa10.25□□□□□ -0.77
MTHFD1-216ENST00000557539 IER5LQ5T953 404 aa10.24□□□□□ -0.77
MTHFD1-216ENST00000557539 TPRNQ4KMQ1 711 aa10.22□□□□□ -0.77
MTHFD1-216ENST00000557539 ZNF467Q7Z7K2 595 aaPredicted RBP10.22□□□□□ -0.77
MTHFD1-216ENST00000557539 SEC24BO95487 1268 aa10.21□□□□□ -0.77
MTHFD1-216ENST00000557539 IRX5P78411 483 aaPredicted RBP10.19□□□□□ -0.78
MTHFD1-216ENST00000557539 MAMSTRQ6ZN01 415 aa10.17□□□□□ -0.78
MTHFD1-216ENST00000557539 PSEN1P49768 467 aa10.16□□□□□ -0.78
MTHFD1-216ENST00000557539 RGL2O15211 777 aa10.15□□□□□ -0.78
MTHFD1-216ENST00000557539 NISCHQ9Y2I1 1504 aa10.15□□□□□ -0.78
MTHFD1-216ENST00000557539 PLCG2P16885 1265 aa10.13□□□□□ -0.79
MTHFD1-216ENST00000557539 SPRYD3Q8NCJ5 442 aa10.13□□□□□ -0.79
MTHFD1-216ENST00000557539 SCUBE2Q9NQ36 999 aa10.13□□□□□ -0.79
MTHFD1-216ENST00000557539 PDAP1Q13442 181 aaKnown RBP10.12□□□□□ -0.79
MTHFD1-216ENST00000557539 OCEL1Q9H607 264 aa10.11□□□□□ -0.79
MTHFD1-216ENST00000557539 TSHZ2Q9NRE2 1034 aa10.11□□□□□ -0.79
MTHFD1-216ENST00000557539 PDCD7Q8N8D1 485 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-216ENST00000557539 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-216ENST00000557539 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
MTHFD1-216ENST00000557539 LCE2DQ5TA82 110 aaPredicted RBP10.05□□□□□ -0.8
MTHFD1-216ENST00000557539 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-216ENST00000557539 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
MTHFD1-216ENST00000557539 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
MTHFD1-216ENST00000557539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.02□□□□□ -0.815e-7■■□□□ 11.8
MTHFD1-216ENST00000557539 CECR2Q9BXF3 1484 aa10.02□□□□□ -0.81
MTHFD1-216ENST00000557539 SLAIN1Q8ND83 568 aa10□□□□□ -0.81
MTHFD1-216ENST00000557539 CUX2O14529 1486 aa9.99□□□□□ -0.81
MTHFD1-216ENST00000557539 RIOK3O14730 519 aaKnown RBP9.99□□□□□ -0.81
MTHFD1-216ENST00000557539 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
MTHFD1-216ENST00000557539 FAM163AQ96GL9 167 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-216ENST00000557539 POTEMA6NI47 508 aa9.97□□□□□ -0.81
MTHFD1-216ENST00000557539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.82
MTHFD1-216ENST00000557539 POTEGQ6S5H5 508 aa9.96□□□□□ -0.82
MTHFD1-216ENST00000557539 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.82
MTHFD1-216ENST00000557539 ZFP91Q96JP5 570 aaPredicted RBP9.96□□□□□ -0.82
MTHFD1-216ENST00000557539 NBR1Q14596 966 aa9.95□□□□□ -0.82
MTHFD1-216ENST00000557539 VGFO15240 615 aaPredicted RBP9.94□□□□□ -0.82
MTHFD1-216ENST00000557539 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-216ENST00000557539 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-216ENST00000557539 HS6ST3Q8IZP7 471 aa9.88□□□□□ -0.83
MTHFD1-216ENST00000557539 C3orf67Q6ZVT6 689 aa9.87□□□□□ -0.83
MTHFD1-216ENST00000557539 BOLA1Q9Y3E2 137 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms