RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 FARP1Q9Y4F1 1045 aaPredicted RBP4.37□□□□□ -1.71
HIF1A-212ENST00000557538 RASEFQ8IZ41 740 aa4.37□□□□□ -1.71
HIF1A-212ENST00000557538 VSIG10Q8N0Z9 540 aa4.37□□□□□ -1.71
HIF1A-212ENST00000557538 CLEC11AQ9Y240 323 aa4.37□□□□□ -1.71
HIF1A-212ENST00000557538 VGFO15240 615 aaPredicted RBP4.36□□□□□ -1.71
HIF1A-212ENST00000557538 RNF25Q96BH1 459 aaPredicted RBP4.36□□□□□ -1.71
HIF1A-212ENST00000557538 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.34□□□□□ -1.71
HIF1A-212ENST00000557538 CIZ1Q9ULV3 898 aaPredicted RBP4.34□□□□□ -1.71
HIF1A-212ENST00000557538 PIP4P2Q8N4L2 257 aa4.34□□□□□ -1.72
HIF1A-212ENST00000557538 ZNF579Q8NAF0 562 aaKnown RBP4.34□□□□□ -1.72
HIF1A-212ENST00000557538 DCAF8Q5TAQ9 597 aa4.33□□□□□ -1.72
HIF1A-212ENST00000557538 CHRDL2Q6WN34 429 aa4.33□□□□□ -1.72
HIF1A-212ENST00000557538 CCDC61Q9Y6R9 512 aa4.33□□□□□ -1.72
HIF1A-212ENST00000557538 CLCN6P51797 869 aa4.33□□□□□ -1.72
HIF1A-212ENST00000557538 PRKAR2AP13861 404 aaKnown RBP4.31□□□□□ -1.72
HIF1A-212ENST00000557538 ZNF467Q7Z7K2 595 aaPredicted RBP4.31□□□□□ -1.72
HIF1A-212ENST00000557538 RYDENQ9NUL5 291 aaKnown RBP4.31□□□□□ -1.72
HIF1A-212ENST00000557538 SPRYD3Q8NCJ5 442 aa4.3□□□□□ -1.72
HIF1A-212ENST00000557538 C19orf67A6NJJ6 358 aa4.29□□□□□ -1.72
HIF1A-212ENST00000557538 NKX1-1Q15270 411 aaPredicted RBP4.28□□□□□ -1.72
HIF1A-212ENST00000557538 GTPBP6O43824 516 aaPredicted RBP4.28□□□□□ -1.72
HIF1A-212ENST00000557538 PDAP1Q13442 181 aaKnown RBP4.28□□□□□ -1.72
HIF1A-212ENST00000557538 KIF12Q96FN5 646 aa4.27□□□□□ -1.73
HIF1A-212ENST00000557538 CHGAP10645 457 aaKnown RBP4.27□□□□□ -1.73
HIF1A-212ENST00000557538 CHADLQ6NUI6 762 aa4.27□□□□□ -1.73
HIF1A-212ENST00000557538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.26□□□□□ -1.73
HIF1A-212ENST00000557538 PAK3O75914 559 aaPredicted RBP4.26□□□□□ -1.73
HIF1A-212ENST00000557538 ZFP91Q96JP5 570 aaPredicted RBP4.26□□□□□ -1.73
HIF1A-212ENST00000557538 ILDR1Q86SU0 546 aaPredicted RBP4.26□□□□□ -1.73
HIF1A-212ENST00000557538 PAXIP1Q6ZW49 1069 aaPredicted RBP4.25□□□□□ -1.73
HIF1A-212ENST00000557538 SOX12O15370 315 aa4.24□□□□□ -1.73
HIF1A-212ENST00000557538 PYGBP11216 843 aa4.24□□□□□ -1.73
HIF1A-212ENST00000557538 HAP1P54257 671 aaPredicted RBP4.24□□□□□ -1.73
HIF1A-212ENST00000557538 DCAF8L2P0C7V8 631 aa4.23□□□□□ -1.73
HIF1A-212ENST00000557538 KDM2AQ9Y2K7 1162 aa4.23□□□□□ -1.73
HIF1A-212ENST00000557538 PSEN1P49768 467 aa4.22□□□□□ -1.73
HIF1A-212ENST00000557538 BCL11BQ9C0K0 894 aaPredicted RBP4.22□□□□□ -1.73
HIF1A-212ENST00000557538 STK25O00506 426 aa4.22□□□□□ -1.73
HIF1A-212ENST00000557538 IFNL1Q8IU54 200 aa4.21□□□□□ -1.74
HIF1A-212ENST00000557538 FBXO22Q8NEZ5 403 aa4.21□□□□□ -1.74
HIF1A-212ENST00000557538 TSPYL2Q9H2G4 693 aaPredicted RBP4.21□□□□□ -1.74
HIF1A-212ENST00000557538 CD44P16070 742 aaKnown RBP4.2□□□□□ -1.74
HIF1A-212ENST00000557538 MAP3K13O43283 966 aa4.2□□□□□ -1.74
HIF1A-212ENST00000557538 TIE1P35590 1138 aa4.2□□□□□ -1.74
HIF1A-212ENST00000557538 BCANQ96GW7 911 aa4.2□□□□□ -1.74
HIF1A-212ENST00000557538 TSHZ2Q9NRE2 1034 aa4.2□□□□□ -1.74
HIF1A-212ENST00000557538 STK24Q9Y6E0 443 aa4.2□□□□□ -1.74
HIF1A-212ENST00000557538 PCDHB13Q9Y5F0 798 aa4.19□□□□□ -1.74
HIF1A-212ENST00000557538 CFAP44Q96MT7 982 aa4.19□□□□□ -1.74
HIF1A-212ENST00000557538 MFRPQ9BY79 579 aa4.19□□□□□ -1.74
HIF1A-212ENST00000557538 ZRANB1Q9UGI0 708 aa4.19□□□□□ -1.74
HIF1A-212ENST00000557538 PCDHB8Q9UN66 801 aa4.19□□□□□ -1.74
HIF1A-212ENST00000557538 NLRP6P59044 892 aa4.18□□□□□ -1.74
HIF1A-212ENST00000557538 SP7Q8TDD2 431 aaPredicted RBP4.18□□□□□ -1.74
HIF1A-212ENST00000557538 ARIH1Q9Y4X5 557 aaPredicted RBP4.17□□□□□ -1.74
HIF1A-212ENST00000557538 MFSD10Q14728 455 aa4.15□□□□□ -1.75
HIF1A-212ENST00000557538 IER5LQ5T953 404 aa4.15□□□□□ -1.75
HIF1A-212ENST00000557538 PHF12Q96QT6 1004 aa4.15□□□□□ -1.75
HIF1A-212ENST00000557538 ASTLQ6HA08 431 aaPredicted RBP4.14□□□□□ -1.75
HIF1A-212ENST00000557538 EFCAB3Q8N7B9 438 aa4.13□□□□□ -1.75
HIF1A-212ENST00000557538 MS4A3Q96HJ5 214 aa4.13□□□□□ -1.75
HIF1A-212ENST00000557538 MS4A4AQ96JQ5 239 aa4.13□□□□□ -1.75
HIF1A-212ENST00000557538 P3H3Q8IVL6 736 aa4.12□□□□□ -1.75
HIF1A-212ENST00000557538 TTLL13PA6NNM8 815 aa4.12□□□□□ -1.75
HIF1A-212ENST00000557538 TMEM121BQ9BXQ6 578 aaPredicted RBP4.12□□□□□ -1.75
HIF1A-212ENST00000557538 BMP2KQ9NSY1 1161 aaPredicted RBP4.11□□□□□ -1.75
HIF1A-212ENST00000557538 TMEM106CQ9BVX2 250 aa4.11□□□□□ -1.75
HIF1A-212ENST00000557538 CAMK2BQ13554 666 aa4.11□□□□□ -1.75
HIF1A-212ENST00000557538 CADPS2Q86UW7 1296 aa4.11□□□□□ -1.75
HIF1A-212ENST00000557538 CRISPLD2Q9H0B8 497 aa4.11□□□□□ -1.75
HIF1A-212ENST00000557538 CABP2Q9NPB3 220 aa4.1□□□□□ -1.75
HIF1A-212ENST00000557538 PCDH10Q9P2E7 1040 aa4.1□□□□□ -1.75
HIF1A-212ENST00000557538 PHF8Q9UPP1 1060 aa4.1□□□□□ -1.75
HIF1A-212ENST00000557538 ATMINO43313 823 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-212ENST00000557538 PPP1R37O75864 691 aa4.09□□□□□ -1.75
HIF1A-212ENST00000557538 IRX5P78411 483 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-212ENST00000557538 ARHGEF1Q92888 912 aaKnown RBP4.09□□□□□ -1.75
HIF1A-212ENST00000557538 TRPC6Q9Y210 931 aa4.08□□□□□ -1.76
HIF1A-212ENST00000557538 PDE4AP27815 886 aa4.08□□□□□ -1.76
HIF1A-212ENST00000557538 NCKAP5LQ9HCH0 1330 aa4.07□□□□□ -1.76
HIF1A-212ENST00000557538 EVX2Q03828 476 aa4.07□□□□□ -1.76
HIF1A-212ENST00000557538 MKRN3Q13064 507 aaKnown RBP4.07□□□□□ -1.76
HIF1A-212ENST00000557538 PDCD7Q8N8D1 485 aaKnown RBP4.07□□□□□ -1.76
HIF1A-212ENST00000557538 GALR2O43603 387 aaPredicted RBP4.07□□□□□ -1.76
HIF1A-212ENST00000557538 KIF3CO14782 793 aa4.06□□□□□ -1.76
HIF1A-212ENST00000557538 OCEL1Q9H607 264 aa4.05□□□□□ -1.76
HIF1A-212ENST00000557538 GABBR2O75899 941 aa4.05□□□□□ -1.76
HIF1A-212ENST00000557538 GPHNQ9NQX3 736 aaPredicted RBP4.05□□□□□ -1.76
HIF1A-212ENST00000557538 ATN1P54259 1190 aaPredicted RBP4.04□□□□□ -1.76
HIF1A-212ENST00000557538 GOLGA2Q08379 1002 aa4.04□□□□□ -1.76
HIF1A-212ENST00000557538 HAX1O00165 279 aa4.04□□□□□ -1.76
HIF1A-212ENST00000557538 WDR70Q9NW82 654 aa4.04□□□□□ -1.76
HIF1A-212ENST00000557538 TRIM35Q9UPQ4 493 aa4.04□□□□□ -1.76
HIF1A-212ENST00000557538 E2F4Q16254 413 aa4.04□□□□□ -1.76
HIF1A-212ENST00000557538 SLC39A7Q92504 469 aa4.04□□□□□ -1.76
HIF1A-212ENST00000557538 KCNV2Q8TDN2 545 aa4.03□□□□□ -1.76
HIF1A-212ENST00000557538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.03□□□□□ -1.765e-7■■□□□ 12.3
HIF1A-212ENST00000557538 NBR1Q14596 966 aa4.03□□□□□ -1.76
HIF1A-212ENST00000557538 L3MBTL3Q96JM7 780 aaPredicted RBP4.03□□□□□ -1.76
HIF1A-212ENST00000557538 TESPA1A2RU30 521 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms