RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
PRPF39-212ENST00000557477 BBXQ8WY36 941 aaPredicted RBP11.28□□□□□ -0.6
PRPF39-212ENST00000557477 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
PRPF39-212ENST00000557477 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-212ENST00000557477 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
PRPF39-212ENST00000557477 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
PRPF39-212ENST00000557477 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
PRPF39-212ENST00000557477 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-212ENST00000557477 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-212ENST00000557477 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-212ENST00000557477 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
PRPF39-212ENST00000557477 HAX1O00165 279 aa11.16□□□□□ -0.62
PRPF39-212ENST00000557477 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
PRPF39-212ENST00000557477 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
PRPF39-212ENST00000557477 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-212ENST00000557477 EVX2Q03828 476 aa11.13□□□□□ -0.63
PRPF39-212ENST00000557477 PYGBP11216 843 aa11.12□□□□□ -0.63
PRPF39-212ENST00000557477 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
PRPF39-212ENST00000557477 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
PRPF39-212ENST00000557477 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
PRPF39-212ENST00000557477 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
PRPF39-212ENST00000557477 DNAJC5Q9H3Z4 198 aa11.05□□□□□ -0.64
PRPF39-212ENST00000557477 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
PRPF39-212ENST00000557477 STK25O00506 426 aa11.04□□□□□ -0.64
PRPF39-212ENST00000557477 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
PRPF39-212ENST00000557477 KDM2AQ9Y2K7 1162 aa11.03□□□□□ -0.64
PRPF39-212ENST00000557477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
PRPF39-212ENST00000557477 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
PRPF39-212ENST00000557477 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.65
PRPF39-212ENST00000557477 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
PRPF39-212ENST00000557477 TSHZ2Q9NRE2 1034 aa11.02□□□□□ -0.65
PRPF39-212ENST00000557477 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
PRPF39-212ENST00000557477 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
PRPF39-212ENST00000557477 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
PRPF39-212ENST00000557477 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
PRPF39-212ENST00000557477 CD44P16070 742 aaKnown RBP10.96□□□□□ -0.65
PRPF39-212ENST00000557477 GTPBP6O43824 516 aaPredicted RBP10.94□□□□□ -0.66
PRPF39-212ENST00000557477 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
PRPF39-212ENST00000557477 ZNF467Q7Z7K2 595 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-212ENST00000557477 PCDHB8Q9UN66 801 aa10.92□□□□□ -0.66
PRPF39-212ENST00000557477 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
PRPF39-212ENST00000557477 PLSCR2Q9NRY7 297 aa10.9□□□□□ -0.66
PRPF39-212ENST00000557477 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
PRPF39-212ENST00000557477 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
PRPF39-212ENST00000557477 KIF12Q96FN5 646 aa10.85□□□□□ -0.67
PRPF39-212ENST00000557477 BCANQ96GW7 911 aa10.85□□□□□ -0.67
PRPF39-212ENST00000557477 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
PRPF39-212ENST00000557477 MAP3K13O43283 966 aa10.84□□□□□ -0.67
PRPF39-212ENST00000557477 LHX8Q68G74 356 aa10.84□□□□□ -0.67
PRPF39-212ENST00000557477 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
PRPF39-212ENST00000557477 PSEN1P49768 467 aa10.83□□□□□ -0.68
PRPF39-212ENST00000557477 GABBR2O75899 941 aa10.81□□□□□ -0.68
PRPF39-212ENST00000557477 RYDENQ9NUL5 291 aaKnown RBP10.78□□□□□ -0.68
PRPF39-212ENST00000557477 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
PRPF39-212ENST00000557477 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
PRPF39-212ENST00000557477 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
PRPF39-212ENST00000557477 CABP2Q9NPB3 220 aa10.71□□□□□ -0.69
PRPF39-212ENST00000557477 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
PRPF39-212ENST00000557477 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
PRPF39-212ENST00000557477 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
PRPF39-212ENST00000557477 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.7
PRPF39-212ENST00000557477 PHF8Q9UPP1 1060 aa10.65□□□□□ -0.7
PRPF39-212ENST00000557477 PRKCSHP14314 528 aaPredicted RBP10.64□□□□□ -0.71
PRPF39-212ENST00000557477 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
PRPF39-212ENST00000557477 PPP1R37O75864 691 aa10.63□□□□□ -0.71
PRPF39-212ENST00000557477 POTEIP0CG38 1075 aa10.63□□□□□ -0.71
PRPF39-212ENST00000557477 SOX12O15370 315 aa10.62□□□□□ -0.71
PRPF39-212ENST00000557477 CLCN6P51797 869 aa10.61□□□□□ -0.71
PRPF39-212ENST00000557477 NLRP6P59044 892 aa10.61□□□□□ -0.71
PRPF39-212ENST00000557477 NBR1Q14596 966 aa10.6□□□□□ -0.71
PRPF39-212ENST00000557477 TIE1P35590 1138 aa10.58□□□□□ -0.72
PRPF39-212ENST00000557477 GOLGA2Q08379 1002 aa10.58□□□□□ -0.72
PRPF39-212ENST00000557477 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
PRPF39-212ENST00000557477 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
PRPF39-212ENST00000557477 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
PRPF39-212ENST00000557477 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
PRPF39-212ENST00000557477 BMP2KQ9NSY1 1161 aaPredicted RBP10.55□□□□□ -0.72
PRPF39-212ENST00000557477 MKRN3Q13064 507 aaKnown RBP10.52□□□□□ -0.73
PRPF39-212ENST00000557477 KCNV2Q8TDN2 545 aa10.5□□□□□ -0.73
PRPF39-212ENST00000557477 WDR70Q9NW82 654 aa10.5□□□□□ -0.73
PRPF39-212ENST00000557477 PELP1Q8IZL8 1130 aaKnown RBP10.49□□□□□ -0.73
PRPF39-212ENST00000557477 TRIM35Q9UPQ4 493 aa10.49□□□□□ -0.73
PRPF39-212ENST00000557477 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
PRPF39-212ENST00000557477 ATN1P54259 1190 aaPredicted RBP10.47□□□□□ -0.73
PRPF39-212ENST00000557477 ATMINO43313 823 aaPredicted RBP10.46□□□□□ -0.73
PRPF39-212ENST00000557477 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
PRPF39-212ENST00000557477 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
PRPF39-212ENST00000557477 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
PRPF39-212ENST00000557477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.741e-7■■■■■ 27.9
PRPF39-212ENST00000557477 CRISPLD2Q9H0B8 497 aa10.39□□□□□ -0.75
PRPF39-212ENST00000557477 E2F4Q16254 413 aa10.38□□□□□ -0.75
PRPF39-212ENST00000557477 LARP6Q9BRS8 491 aaKnown RBP10.38□□□□□ -0.75
PRPF39-212ENST00000557477 DPY19L2Q6NUT2 758 aa10.37□□□□□ -0.75
PRPF39-212ENST00000557477 PDE4AP27815 886 aa10.36□□□□□ -0.75
PRPF39-212ENST00000557477 MFSD10Q14728 455 aa10.36□□□□□ -0.75
PRPF39-212ENST00000557477 IER5LQ5T953 404 aa10.35□□□□□ -0.75
PRPF39-212ENST00000557477 PDCD7Q8N8D1 485 aaKnown RBP10.34□□□□□ -0.75
PRPF39-212ENST00000557477 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
PRPF39-212ENST00000557477 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
PRPF39-212ENST00000557477 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms